version 1.0
Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome I, complete sequence - 1..3599677 3391 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 409 37.92 0 411134..411787 - 217 183219836 - LEPBI_I0414 - hypothetical protein 410 37.40 0 411819..411941 - 40 183219837 - LEPBI_I0415 - hypothetical protein 411 37.50 0 412030..412269 - 79 183219838 - LEPBI_I0416 - hypothetical protein 412 33.92 -1 412568..413245 - 225 183219839 - LEPBI_I0417 - hypothetical protein 413 31.60 -1 413290..413577 - 95 183219840 - LEPBI_I0418 - hypothetical protein 414 32.52 -1 413678..413800 - 40 183219841 - LEPBI_I0419 - hypothetical protein 415 34.62 -1 413772..414314 - 180 183219842 - LEPBI_I0420 - hypothetical protein 416 30.97 -1 414436..414774 - 112 183219843 - LEPBI_I0421 - hypothetical protein 417 35.23 0 415046..416572 + 508 183219844 - LEPBI_I0422 - putative methyl-accepting chemotaxis protein (MCP); putative membrane protein 418 42.58 0 416871..417281 + 136 183219845 - LEPBI_I0423 - putative signal peptide 419 35.96 0 417524..419656 - 710 183219846 - LEPBI_I0424 - putative two-component sensor protein 420 31.67 -1 419679..419858 - 59 183219847 - LEPBI_I0425 - hypothetical protein 421 40.25 0 420284..421165 - 293 183219848 - LEPBI_I0426 - hypothetical protein 422 36.56 0 421451..421636 + 61 183219849 - LEPBI_I0427 - hypothetical protein 423 36.64 0 421726..423084 + 452 183219850 - LEPBI_I0428 - sodium:proton antiporter 424 35.46 0 423084..423224 + 46 183219851 - LEPBI_I0429 - hypothetical protein 425 36.79 0 423243..423560 - 105 183219852 - LEPBI_I0430 - ArsR family transcriptional regulator 426 36.18 0 423580..424035 - 151 183219853 - LEPBI_I0431 - hypothetical protein 427 38.54 0 424767..426302 - 511 183219854 - LEPBI_I0433 - hypothetical protein 428 43.45 +1 426386..426820 - 144 183219855 - LEPBI_I0434 - hypothetical protein 429 33.33 -1 427503..427886 + 127 183219856 - LEPBI_I0437 - hypothetical protein 430 34.64 -1 427934..428086 + 50 183219857 - LEPBI_I0438 - hypothetical protein 431 60.00 +2 428578..428697 + 39 183219858 - LEPBI_I0439 - hypothetical protein 432 61.40 +2 428907..429305 + 132 183219859 - LEPBI_I0440 - hypothetical protein 433 40.00 0 431552..432166 - 204 183219860 - LEPBI_I0441 - hypothetical protein 434 38.03 0 432317..434188 + 623 183219861 - LEPBI_I0442 - hypothetical protein 435 28.79 -2 434201..434464 + 87 183219862 - LEPBI_I0443 - hypothetical protein 436 31.22 -1 434461..435645 + 394 183219863 - LEPBI_I0444 - kelch repeat-containing protein 437 37.76 0 437412..438134 - 240 183219864 - LEPBI_I0445 - hypothetical protein 438 51.91 +2 439088..440110 - 340 183219865 mreB LEPBI_I0446 - rod shape-determining protein MreB 439 41.70 0 440254..441855 + 533 183219866 ppx LEPBI_I0447 - exopolyphosphatase (exopolypase; metaphosphatase) 440 35.44 0 441852..444410 + 852 183219867 - LEPBI_I0448 - TPR repeat-containing protein 441 40.76 0 444544..445755 + 403 183219868 - LEPBI_I0449 - major facilitator superfamily permease 442 43.16 +1 445890..447374 - 494 183219869 pepA LEPBI_I0450 - aminopeptidase 443 41.14 0 447371..447844 - 157 183219870 - LEPBI_I0451 - putative peroxiredoxin Bcp (thioredoxin reductase; bacterioferritin comigratory protein) 444 42.65 0 447923..448330 + 135 183219871 - LEPBI_I0452 - hypothetical protein 445 40.33 0 448359..449831 + 490 183219872 - LEPBI_I0453 - putative ion transporter 446 40.67 0 449859..451235 - 458 183219873 - LEPBI_I0454 - putative amino-acid transporter; putative membrane protein 447 40.50 0 451236..451751 - 171 183219874 - LEPBI_I0455 - hypothetical protein 448 43.06 +1 451926..452891 + 321 183219875 pfaP LEPBI_I0456 - peptidase PfaP (periplasmic flagella-associated protein; PF-associated peptidase) 449 36.45 0 452888..453496 + 202 183219876 - LEPBI_I0457 - hypothetical protein 450 43.41 +1 453497..454240 + 247 183219877 surE LEPBI_I0458 - 5'-nucleotidase SurE 451 39.43 0 454243..454914 + 223 183219878 - LEPBI_I0459 - TPR repeat-containing protein 452 34.57 -1 455964..457340 + 458 183219879 - LEPBI_I0461 - hypothetical protein 453 40.86 0 457418..457603 + 61 183219880 - LEPBI_I0462 - hypothetical protein 454 35.29 0 457793..459841 + 682 183219881 - LEPBI_I0463 - putative methyl-accepting chemotaxis protein; putative signal peptide 455 42.11 0 459903..460529 + 208 183219882 - LEPBI_I0464 - putative signal peptide 456 35.17 0 460633..461559 + 308 183219883 - LEPBI_I0465 - hypothetical protein 457 30.89 -1 461585..462199 + 204 183219884 - LEPBI_I0466 - putative two-component sensor protein 458 30.86 -1 462358..463569 - 403 183219885 - LEPBI_I0467 - putative acyltransferase; putative membrane protein 459 39.73 0 463750..464046 + 98 183219886 - LEPBI_I0468 - hypothetical protein 460 32.09 -1 464228..464629 - 133 183219887 - LEPBI_I0469 - hypothetical protein 461 33.45 -1 464631..465524 - 297 183219888 - LEPBI_I0470 - hypothetical protein 462 36.29 0 465708..466994 - 428 183219889 - LEPBI_I0471 - putative integrase/recombinase 463 32.41 -1 467111..467326 + 71 183219890 - LEPBI_I0472 - hypothetical protein 464 42.13 0 467471..469072 - 533 183219891 nadB LEPBI_I0473 - L-aspartate oxidase (LASPO; quinolinate synthetase B) 465 38.21 0 469124..470968 - 614 183219892 - LEPBI_I0474 - S41 family peptidase 466 43.83 +1 471060..472088 + 342 183219893 - LEPBI_I0475 - hypothetical protein 467 41.25 0 472054..472836 - 260 183219894 pdxJ LEPBI_I0476 - pyridoxal phosphate biosynthetic protein PdxJ (PNP synthase) 468 45.63 +1 472941..473444 + 167 183219895 - LEPBI_I0477 - hypothetical protein 469 43.77 +1 473441..474331 + 296 183219896 miaA LEPBI_I0478 - tRNA delta(2)-isopentenylpyrophosphate transferase 470 36.51 0 474353..474604 + 83 183219897 hfq LEPBI_I0479 - RNA-binding protein Hfq 471 42.20 0 474657..475727 + 356 183219898 manC LEPBI_I0480 - mannose-1-phosphate guanylyltransferase [GDP] (GDP-mannose pyrophosphorylase; GMP) 472 45.53 +1 476055..476636 + 193 183219899 - LEPBI_I0481 - hypothetical protein 473 42.35 0 476657..477133 + 158 183219900 - LEPBI_I0482 - putative chemotaxis protein CheW 474 41.70 0 477167..477883 + 238 183219901 - LEPBI_I0483 - putative transport system 475 33.84 -1 478194..479969 + 591 183219902 - LEPBI_I0484 - putative methyl-accepting chemotaxis protein; putative membrane protein 476 35.19 0 479966..480289 + 107 183219903 - LEPBI_I0485 - hypothetical protein 477 32.29 -1 480329..480424 - 31 183219904 - LEPBI_I0486 - putative two-component response regulator 478 36.07 0 480441..482231 - 596 183219905 - LEPBI_I0487 - putative two-component sensor protein 479 35.28 0 482500..483168 - 222 183219906 - LEPBI_I0488 - hypothetical protein 480 37.08 0 483294..485324 + 676 183219907 - LEPBI_I0489 - TPR repeat-containing protein 481 36.65 0 485308..485880 - 190 183219908 - LEPBI_I0490 - hypothetical protein 482 36.51 0 485912..486100 - 62 183219909 - LEPBI_I0491 - hypothetical protein 483 38.27 0 486107..487240 - 377 183219910 - LEPBI_I0492 - putative signal peptide 484 33.55 -1 487237..487701 - 154 183219911 - LEPBI_I0493 - polyglutamyl synthetase CapC family protein 485 37.51 0 487694..488890 - 398 183219912 - LEPBI_I0494 - polyglutamyl synthetase CapB family protein 486 36.50 0 488975..491371 + 798 183219913 - LEPBI_I0495 - hypothetical protein 487 38.35 0 491412..491750 - 112 183219914 - LEPBI_I0496 - putative anti-sigma-B factor antagonist (anti-anti-sigma-B factor) 488 36.26 0 491795..493843 - 682 183219915 - LEPBI_I0497 - putative penicillin-binding protein, transpeptidase 489 39.99 0 493858..495510 - 550 183219916 gpmI LEPBI_I0498 - 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 490 39.53 0 495546..496739 - 397 183219917 - LEPBI_I0499 - hypothetical protein 491 37.23 0 496739..498817 - 692 183219918 - LEPBI_I0500 - putative TonB-dependent outer membrane receptor; putative signal peptide 492 40.21 0 498841..499902 + 353 183219919 - LEPBI_I0501 - carbohydrate kinase PfkB family 493 39.14 0 499916..500311 - 131 183219920 - LEPBI_I0502 - putative two-component response regulator 494 38.22 0 500308..501822 - 504 183219921 - LEPBI_I0503 - sensor protein 495 38.39 0 501855..502784 + 309 183219922 - LEPBI_I0504 - ABC-type transport system, ATPase 496 37.57 0 502781..503512 + 243 183219923 - LEPBI_I0505 - ABC-type transport system, permease; putative membrane protein 497 38.09 0 503516..505387 + 623 183219924 - LEPBI_I0506 - hypothetical protein 498 38.73 0 505384..506457 + 357 183219925 - LEPBI_I0507 - hypothetical protein 499 38.54 0 506459..507073 + 204 183219926 - LEPBI_I0508 - hypothetical protein 500 40.07 0 507070..508464 + 464 183219927 mpl LEPBI_I0509 - UDP-n-acetylmuramate:l-alanyl-gamma-d-glutamyl-meso-diaminopimelate ligase 501 43.47 +1 508461..509486 + 341 183219928 pheS LEPBI_I0510 - phenylalanyl-tRNA synthetase alpha chain (phenylalanine--tRNA ligase alpha chain; PheRS) 502 44.18 +1 509530..511059 - 509 183219929 - LEPBI_I0511 - putative thiolase 503 37.61 0 511075..511869 - 264 183219930 - LEPBI_I0512 - hypothetical protein 504 38.33 0 511866..513005 - 379 183219931 - LEPBI_I0513 - hypothetical protein 505 39.65 0 513002..513286 - 94 183219932 - LEPBI_I0514 - hypothetical protein 506 40.58 0 513407..513682 + 91 183219933 rpsT LEPBI_I0515 - 30S ribosomal protein S20 507 38.34 0 513965..515341 + 458 183219934 - LEPBI_I0516 - putative phosphomannomutase/phosphoglucomutase (PMM/PGM) 508 40.58 0 515326..517161 + 611 183219935 glmS LEPBI_I0517 - glucosamine--fructose-6-phosphate aminotransferase 38.82 MEAN 4.08 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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