version 1.0
Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome I, complete sequence - 1..3599677 3391 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3042 44.19 +1 3236570..3236965 + 131 183222469 - LEPBI_I3123 - hypothetical protein 3043 38.90 0 3237034..3239010 + 658 183222470 - LEPBI_I3124 - serine phosphatase 3044 40.97 0 3239036..3240712 - 558 183222471 - LEPBI_I3125 - putative sodium-dependent phosphate transport protein 3045 44.11 +1 3240807..3241298 + 163 183222472 slyD LEPBI_I3126 - FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (rotamase) 3046 37.88 0 3241557..3241820 + 87 183222473 rbpA3 LEPBI_I3127 - RNA-binding protein 3047 38.49 0 3241887..3242390 - 167 183222474 - LEPBI_I3128 - putative ATPase 3048 39.52 0 3242437..3242808 + 123 183222475 - LEPBI_I3129 - hypothetical protein 3049 41.54 0 3242939..3244327 + 462 183222476 fumC LEPBI_I3130 - fumarate hydratase class II (fumarase C) 3050 37.47 0 3244368..3244754 - 128 183222477 - LEPBI_I3131 - hypothetical protein 3051 34.02 -1 3244840..3245568 - 242 183222478 - LEPBI_I3132 - putative SAM-dependent methyltransferase 3052 38.64 0 3245574..3245837 - 87 183222479 - LEPBI_I3133 - C-terminal hypothetical region 3053 35.71 0 3246006..3246971 + 321 183222480 - LEPBI_I3135 - hypothetical protein 3054 38.39 0 3246980..3248938 - 652 183222481 sdhA2 LEPBI_I3136 - succinate dehydrogenase flavoprotein subunit SdhA (fumarate reductase) 3055 43.74 +1 3248967..3250580 - 537 183222482 fumA LEPBI_I3137 - fumarate hydratase class I, aerobic 3056 38.17 0 3250680..3251279 + 199 183222483 - LEPBI_I3138 - putative S-adenosyl-L-methionine-dependent methyltransferase 3057 43.51 +1 3251425..3251817 - 130 183222484 - LEPBI_I3139 - hypothetical protein 3058 41.26 0 3251906..3252397 - 163 183222485 - LEPBI_I3140 - putative transporter; putative membrane protein 3059 35.47 0 3252632..3254647 - 671 183222486 ziaA LEPBI_I3141 - putative Zinc-exporting ATPase (Zn(II)-translocating P-type ATPase); putative membrane protein 3060 35.02 0 3255149..3258286 - 1045 183222487 - LEPBI_I3142 - putative cation efflux system protein; putative membrane protein 3061 28.77 -2 3258276..3259085 - 269 183222488 - LEPBI_I3143 - hypothetical protein 3062 31.64 -1 3259075..3260316 - 413 183222489 - LEPBI_I3144 - hypothetical protein 3063 31.73 -1 3260362..3260736 - 124 183222490 - LEPBI_I3145 - hypothetical protein 3064 39.94 0 3260847..3261860 - 337 183222491 - LEPBI_I3146 - putative signal peptide 3065 33.17 -1 3261913..3262533 + 206 183222492 - LEPBI_I3147 - TetR family transcriptional regulator 3066 39.17 0 3262627..3263106 - 159 183222493 - LEPBI_I3148 - hypothetical protein 3067 42.11 0 3263456..3264025 - 189 183222494 - LEPBI_I3149 - hypothetical protein 3068 46.01 +1 3264085..3265023 + 312 183222495 - LEPBI_I3150 - pseudouridine synthase (Uracil hydrolyase) 3069 38.05 0 3265020..3266483 + 487 183222496 - LEPBI_I3151 - hypothetical protein 3070 39.57 0 3266523..3267260 + 245 183222497 - LEPBI_I3152 - TerC family protein 3071 39.93 0 3267263..3267838 + 191 183222498 - LEPBI_I3153 - hypothetical protein 3072 37.28 0 3267830..3270262 - 810 183222499 - LEPBI_I3154 - putative regulatory protein; putative membrane protein; putative signal peptide 3073 40.20 0 3270269..3270865 + 198 183222500 - LEPBI_I3155 - putative regulatory protein 3074 40.55 0 3270911..3271423 + 170 183222501 - LEPBI_I3156 - putative phosphatase 3075 40.55 0 3271420..3271932 + 170 183222502 hpt LEPBI_I3157 - hypoxanthine phosphoribosyltransferase (HPRT) 3076 37.78 0 3271929..3272198 + 89 183222503 - LEPBI_I3158 - hypothetical protein 3077 38.30 0 3272203..3272343 + 46 183222504 - LEPBI_I3159 - hypothetical protein 3078 40.24 0 3272437..3273348 - 303 183222505 - LEPBI_I3160 - putative ABC-type transport system, periplasmic phosphate-binding protein 3079 40.83 0 3273455..3274882 + 475 183222506 - LEPBI_I3161 - hypothetical protein 3080 41.37 0 3274879..3276147 - 422 183222507 - LEPBI_I3162 - hypothetical protein 3081 40.62 0 3276196..3278694 - 832 183222508 - LEPBI_I3163 - putative sulfatase family protein 3082 43.26 +1 3278697..3279572 + 291 183222509 - LEPBI_I3164 - putative acylglycerol lipase 3083 39.64 0 3279580..3280023 + 147 183222510 - LEPBI_I3165 - hypothetical protein 3084 41.19 0 3280040..3280459 + 139 183222511 - LEPBI_I3166 - putative MaoC-like dehydratase 3085 34.04 -1 3280603..3281028 + 141 183222512 - LEPBI_I3167 - hypothetical protein 3086 37.41 0 3281400..3282062 + 220 183222513 - LEPBI_I3168 - hypothetical protein 3087 38.12 0 3282240..3282824 - 194 183222514 - LEPBI_I3169 - hypothetical protein 3088 38.93 0 3282821..3283570 - 249 183222515 - LEPBI_I3170 - putative D-alanyl-D-alanine dipeptidase VanX; putative signal peptide 3089 38.75 0 3283591..3284457 - 288 183222516 - LEPBI_I3171 - putative vancomycin B-type resistance protein VanW 3090 38.01 0 3284447..3285730 - 427 183222517 - LEPBI_I3172 - hypothetical protein 3091 37.43 0 3285736..3287028 - 430 183222518 - LEPBI_I3173 - hypothetical protein 3092 40.32 0 3287096..3287410 - 104 183222519 trxA1 LEPBI_I3174 - thioredoxin 1 (TRX-1) 3093 35.49 0 3287569..3288216 + 215 183222520 - LEPBI_I3175 - putative cyclic nucleotide-binding protein 3094 36.68 0 3288152..3288928 - 258 183222521 - LEPBI_I3176 - hypothetical protein 3095 35.54 0 3289236..3290324 - 362 183222522 - LEPBI_I3177 - putative Zn-dependent hydrolase 3096 40.87 0 3290324..3292075 - 583 183222523 ggtB LEPBI_I3178 - gamma-glutamyltranspeptidase (precursor) 3097 37.98 0 3292542..3293618 + 358 183222524 - LEPBI_I3179 - putative dihydroflavonol-4-reductase 3098 42.74 0 3293656..3293772 - 38 183222525 - LEPBI_I3180 - hypothetical protein 3099 36.75 0 3293811..3294395 + 194 183222526 - LEPBI_I3181 - hypothetical protein 3100 38.59 0 3294482..3295090 - 202 183222527 - LEPBI_I3182 - putative DNA repair system specific for alkylated DNA 3101 42.61 0 3295194..3295484 + 96 183222528 - LEPBI_I3183 - hypothetical protein 3102 41.38 0 3295484..3296626 + 380 183222529 - LEPBI_I3184 - hypothetical protein 3103 38.32 0 3296687..3297268 + 193 183222530 - LEPBI_I3185 - hypothetical protein 3104 35.09 0 3297294..3297464 + 56 183222531 - LEPBI_I3186 - hypothetical protein 3105 38.53 0 3297602..3298621 - 339 183222532 - LEPBI_I3187 - putative Zinc-dependent dehydrogenase 3106 41.60 0 3298699..3299811 + 370 183222533 gcvT LEPBI_I3188 - aminomethyltransferase (glycine cleavage system T protein) 3107 41.22 0 3299827..3300219 + 130 183222534 gcvH LEPBI_I3189 - glycine cleavage system H protein 3108 42.20 0 3300230..3303151 + 973 183222535 gcvP LEPBI_I3190 - glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) 3109 39.76 0 3303167..3303493 + 108 183222536 - LEPBI_I3191 - putative ferredoxin-like protein, 2 Fe-2S 3110 42.92 +1 3303712..3304587 + 291 183222537 - LEPBI_I3192 - putative cytochrome c with heme-binding site; putative signal peptide 3111 38.30 0 3304631..3307084 - 817 183222538 - LEPBI_I3193 - putative cysteine protease; putative signal peptide 3112 33.69 -1 3307081..3307644 - 187 183222539 - LEPBI_I3194 - hypothetical protein 3113 36.39 0 3307832..3309532 - 566 183222540 - LEPBI_I3195 - hypothetical protein 3114 40.93 0 3309571..3312954 - 1127 183222541 - LEPBI_I3196 - putative methylmalonyl-CoA mutase 3115 44.06 +1 3313049..3313924 - 291 183222542 - LEPBI_I3197 - putative acyltransferase 3116 38.00 0 3313942..3314949 + 335 183222543 - LEPBI_I3198 - putative PA-phosphatase related phosphoesterase 3117 33.65 -1 3314953..3316230 + 425 183222544 - LEPBI_I3199 - hypothetical protein 3118 33.33 -1 3316208..3316834 - 208 183222545 - LEPBI_I3200 - hypothetical protein 3119 34.90 0 3316888..3317778 - 296 183222546 senB LEPBI_I3201 - putative two-component response regulator receiver 3120 35.68 0 3317841..3319205 - 454 183222547 - LEPBI_I3202 - putative serine protease; putative signal peptide 3121 35.25 0 3319192..3320649 - 485 183222548 - LEPBI_I3203 - putative serine-type endopeptidase; putative signal peptide 3122 35.27 0 3320642..3321517 - 291 183222549 - LEPBI_I3204 - hypothetical protein 3123 45.31 +1 3321690..3322541 + 283 183222550 - LEPBI_I3205 - putative sulfurtransferase 3124 41.66 0 3322602..3324836 + 744 183222551 - LEPBI_I3206 - putative alpha-glucosidase II 3125 43.48 +1 3324848..3325675 + 275 183222552 - LEPBI_I3207 - hypothetical protein 3126 39.22 0 3325672..3326079 - 135 183222553 - LEPBI_I3208 - putative OsmC-like protein 3127 39.11 0 3326076..3326750 - 224 183222554 - LEPBI_I3209 - hypothetical protein 3128 35.83 0 3326812..3327051 - 79 183222555 csrA LEPBI_I3210 - carbon storage regulator-like protein 3129 36.51 0 3327055..3327558 - 167 183222556 - LEPBI_I3211 - hypothetical protein 3130 42.24 0 3327569..3328837 - 422 183222557 flgL LEPBI_I3212 - flagellar hook-associated protein 3 (HAP3) 3131 42.42 0 3328840..3330753 - 637 183222558 flgK LEPBI_I3213 - flagellar hook-associated protein 1 (HAP1) 3132 41.13 0 3330763..3331275 - 170 183222559 - LEPBI_I3214 - hypothetical protein 3133 48.89 +2 3331362..3331541 + 59 183222560 - LEPBI_I3215 - hypothetical protein 3134 34.72 -1 3331543..3331830 - 95 183222561 - LEPBI_I3216 - hypothetical protein 3135 37.20 0 3332045..3332380 + 111 183222562 - LEPBI_I3217 - hypothetical protein 3136 40.61 0 3332382..3332972 + 196 183222563 - LEPBI_I3218 - hypothetical protein 3137 42.94 +1 3332950..3333615 - 221 183222564 aat LEPBI_I3219 - leucyl/phenylalanyl-tRNA--protein transferase 3138 38.25 0 3333612..3334343 - 243 183222565 - LEPBI_I3220 - hypothetical protein 3139 38.82 0 3334527..3335528 + 333 183222566 - LEPBI_I3221 - hypothetical protein 3140 41.60 0 3335525..3335899 + 124 183222567 - LEPBI_I3222 - hypothetical protein 3141 38.04 0 3335980..3336468 + 162 183222568 - LEPBI_I3223 - putative RNA polymerase sigma factor 38.82 MEAN 4.08 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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