version 1.0
Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome I, complete sequence - 1..3599677 3391 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2994 41.64 0 3184559..3186496 + 645 183222421 mrdA LEPBI_I3075 - penicillin-binding protein 2 2995 42.97 +1 3186496..3188010 + 504 183222422 mrdB LEPBI_I3076 - rod shape-determining protein; putative membrane protein 2996 35.84 0 3188019..3188855 + 278 183222423 - LEPBI_I3077 - hypothetical protein 2997 40.11 0 3188901..3189830 - 309 183222424 ribF LEPBI_I3078 - riboflavin biosynthesis protein RibF 2998 42.28 0 3189867..3190436 + 189 183222425 - LEPBI_I3079 - hypothetical protein 2999 40.00 0 3190437..3190781 - 114 183222426 - LEPBI_I3080 - putative anti-sigma factor antagonist 3000 42.50 0 3190901..3191620 + 239 183222427 - LEPBI_I3081 - putative signal peptide 3001 41.95 0 3191649..3192344 + 231 183222428 - LEPBI_I3082 - putative chaperone protein DnaJ 3002 41.40 0 3192356..3193372 + 338 183222429 manA LEPBI_I3083 - mannose-6-phosphate isomerase 3003 43.79 +1 3193495..3194355 - 286 183222430 - LEPBI_I3084 - putative pirin-like protein 3004 39.15 0 3194352..3195314 - 320 183222431 - LEPBI_I3085 - hypothetical protein 3005 38.89 0 3195262..3195477 - 71 183222432 - LEPBI_I3086 - hypothetical protein 3006 37.38 0 3195492..3196034 - 180 183222433 - LEPBI_I3087 - putative signal peptide 3007 41.44 0 3196077..3197396 - 439 183222434 glpT LEPBI_I3088 - putative glycerol-3-phosphate transporter; putative membrane protein 3008 43.28 +1 3197443..3198417 + 324 183222435 cysK2 LEPBI_I3089 - cysteine synthase A 3009 44.90 +1 3198689..3203641 + 1650 183222436 - LEPBI_I3090 - hypothetical protein 3010 35.15 0 3203654..3204646 + 330 183222437 - LEPBI_I3091 - IS30 family transposase 3011 39.53 0 3204692..3205675 + 327 183222438 - LEPBI_I3092 - hypothetical protein 3012 39.57 0 3205672..3206088 + 138 183222439 - LEPBI_I3093 - hypothetical protein 3013 34.12 -1 3206133..3206894 - 253 183222440 - LEPBI_I3094 - hypothetical protein 3014 36.60 0 3206891..3208849 - 652 183222441 acsA1 LEPBI_I3095 - acetoacetyl-coenzyme A synthetase 3015 32.46 -1 3208943..3210313 + 456 183222442 - LEPBI_I3096 - putative membrane bound 0-acyl transferase, putative alginate biosynthesis protein; putative membrane protein 3016 33.24 -1 3210322..3211410 + 362 183222443 - LEPBI_I3097 - hypothetical protein 3017 36.11 0 3211415..3211810 + 131 183222444 - LEPBI_I3098 - hypothetical protein 3018 33.11 -1 3211859..3213190 + 443 183222445 - LEPBI_I3099 - putative efflux system outer membrane protein CzcC 3019 33.25 -1 3213187..3214326 + 379 183222446 - LEPBI_I3100 - putative cation efflux system protein CzcB; putative signal peptide 3020 35.71 0 3214328..3217438 + 1036 183222447 - LEPBI_I3101 - putative cation efflux system protein CzcA; putative membrane protein 3021 37.30 0 3217387..3218193 - 268 183222448 - LEPBI_I3102 - putative carboxymethylenebutenolidase 3022 38.12 0 3218554..3220266 + 570 183222449 - LEPBI_I3103 - Acyl-CoA dehydrogenase 3023 35.03 0 3220359..3221540 - 393 183222450 - LEPBI_I3104 - putative fatty acid desaturase 3024 37.57 0 3221584..3222669 - 361 183222451 - LEPBI_I3105 - putative ferredoxin--NAD(+) reductase 3025 46.20 +1 3222818..3223462 + 214 183222452 - LEPBI_I3106 - TetR family transcriptional regulator 3026 37.58 0 3223505..3225247 - 580 183222453 - LEPBI_I3107 - putative regulator 3027 39.84 0 3225544..3225927 + 127 183222454 - LEPBI_I3108 - putative signal peptide 3028 41.07 0 3225927..3226262 + 111 183222455 - LEPBI_I3109 - putative signal peptide 3029 34.22 -1 3226264..3226602 + 112 183222456 - LEPBI_I3110 - putative signal peptide 3030 33.84 -1 3226595..3227581 + 328 183222457 - LEPBI_I3111 - hypothetical protein 3031 45.68 +1 3227644..3228048 - 134 183222458 - LEPBI_I3112 - putative 6-pyruvoyl tetrahydrobiopterin synthase 3032 42.79 0 3228114..3228335 + 73 183222459 - LEPBI_I3113 - hypothetical protein 3033 34.98 0 3228420..3228905 + 161 183222460 - LEPBI_I3114 - hypothetical protein 3034 44.38 +1 3228895..3229908 - 337 183222461 - LEPBI_I3115 - putative NADPH:quinone reductase 3035 37.73 0 3230076..3230507 - 143 183222462 - LEPBI_I3116 - glyoxalase/bleomycin resistance protein 3036 44.71 +1 3230688..3231935 - 415 183222463 - LEPBI_I3117 - alcohol dehydrogenase 3037 39.68 0 3232000..3232944 - 314 183222464 - LEPBI_I3118 - putative signal peptide 3038 42.72 0 3232941..3233846 - 301 183222465 - LEPBI_I3119 - hypothetical protein 3039 42.04 0 3233843..3235048 - 401 183222466 - LEPBI_I3120 - putative cytochrome c peroxidase; putative signal peptide 3040 39.72 0 3235110..3235955 - 281 183222467 - LEPBI_I3121 - putative signal peptide 3041 42.46 0 3236043..3236513 - 156 183222468 - LEPBI_I3122 - putative signal peptide 3042 44.19 +1 3236570..3236965 + 131 183222469 - LEPBI_I3123 - hypothetical protein 3043 38.90 0 3237034..3239010 + 658 183222470 - LEPBI_I3124 - serine phosphatase 3044 40.97 0 3239036..3240712 - 558 183222471 - LEPBI_I3125 - putative sodium-dependent phosphate transport protein 3045 44.11 +1 3240807..3241298 + 163 183222472 slyD LEPBI_I3126 - FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (rotamase) 3046 37.88 0 3241557..3241820 + 87 183222473 rbpA3 LEPBI_I3127 - RNA-binding protein 3047 38.49 0 3241887..3242390 - 167 183222474 - LEPBI_I3128 - putative ATPase 3048 39.52 0 3242437..3242808 + 123 183222475 - LEPBI_I3129 - hypothetical protein 3049 41.54 0 3242939..3244327 + 462 183222476 fumC LEPBI_I3130 - fumarate hydratase class II (fumarase C) 3050 37.47 0 3244368..3244754 - 128 183222477 - LEPBI_I3131 - hypothetical protein 3051 34.02 -1 3244840..3245568 - 242 183222478 - LEPBI_I3132 - putative SAM-dependent methyltransferase 3052 38.64 0 3245574..3245837 - 87 183222479 - LEPBI_I3133 - C-terminal hypothetical region 3053 35.71 0 3246006..3246971 + 321 183222480 - LEPBI_I3135 - hypothetical protein 3054 38.39 0 3246980..3248938 - 652 183222481 sdhA2 LEPBI_I3136 - succinate dehydrogenase flavoprotein subunit SdhA (fumarate reductase) 3055 43.74 +1 3248967..3250580 - 537 183222482 fumA LEPBI_I3137 - fumarate hydratase class I, aerobic 3056 38.17 0 3250680..3251279 + 199 183222483 - LEPBI_I3138 - putative S-adenosyl-L-methionine-dependent methyltransferase 3057 43.51 +1 3251425..3251817 - 130 183222484 - LEPBI_I3139 - hypothetical protein 3058 41.26 0 3251906..3252397 - 163 183222485 - LEPBI_I3140 - putative transporter; putative membrane protein 3059 35.47 0 3252632..3254647 - 671 183222486 ziaA LEPBI_I3141 - putative Zinc-exporting ATPase (Zn(II)-translocating P-type ATPase); putative membrane protein 3060 35.02 0 3255149..3258286 - 1045 183222487 - LEPBI_I3142 - putative cation efflux system protein; putative membrane protein 3061 28.77 -2 3258276..3259085 - 269 183222488 - LEPBI_I3143 - hypothetical protein 3062 31.64 -1 3259075..3260316 - 413 183222489 - LEPBI_I3144 - hypothetical protein 3063 31.73 -1 3260362..3260736 - 124 183222490 - LEPBI_I3145 - hypothetical protein 3064 39.94 0 3260847..3261860 - 337 183222491 - LEPBI_I3146 - putative signal peptide 3065 33.17 -1 3261913..3262533 + 206 183222492 - LEPBI_I3147 - TetR family transcriptional regulator 3066 39.17 0 3262627..3263106 - 159 183222493 - LEPBI_I3148 - hypothetical protein 3067 42.11 0 3263456..3264025 - 189 183222494 - LEPBI_I3149 - hypothetical protein 3068 46.01 +1 3264085..3265023 + 312 183222495 - LEPBI_I3150 - pseudouridine synthase (Uracil hydrolyase) 3069 38.05 0 3265020..3266483 + 487 183222496 - LEPBI_I3151 - hypothetical protein 3070 39.57 0 3266523..3267260 + 245 183222497 - LEPBI_I3152 - TerC family protein 3071 39.93 0 3267263..3267838 + 191 183222498 - LEPBI_I3153 - hypothetical protein 3072 37.28 0 3267830..3270262 - 810 183222499 - LEPBI_I3154 - putative regulatory protein; putative membrane protein; putative signal peptide 3073 40.20 0 3270269..3270865 + 198 183222500 - LEPBI_I3155 - putative regulatory protein 3074 40.55 0 3270911..3271423 + 170 183222501 - LEPBI_I3156 - putative phosphatase 3075 40.55 0 3271420..3271932 + 170 183222502 hpt LEPBI_I3157 - hypoxanthine phosphoribosyltransferase (HPRT) 3076 37.78 0 3271929..3272198 + 89 183222503 - LEPBI_I3158 - hypothetical protein 3077 38.30 0 3272203..3272343 + 46 183222504 - LEPBI_I3159 - hypothetical protein 3078 40.24 0 3272437..3273348 - 303 183222505 - LEPBI_I3160 - putative ABC-type transport system, periplasmic phosphate-binding protein 3079 40.83 0 3273455..3274882 + 475 183222506 - LEPBI_I3161 - hypothetical protein 3080 41.37 0 3274879..3276147 - 422 183222507 - LEPBI_I3162 - hypothetical protein 3081 40.62 0 3276196..3278694 - 832 183222508 - LEPBI_I3163 - putative sulfatase family protein 3082 43.26 +1 3278697..3279572 + 291 183222509 - LEPBI_I3164 - putative acylglycerol lipase 3083 39.64 0 3279580..3280023 + 147 183222510 - LEPBI_I3165 - hypothetical protein 3084 41.19 0 3280040..3280459 + 139 183222511 - LEPBI_I3166 - putative MaoC-like dehydratase 3085 34.04 -1 3280603..3281028 + 141 183222512 - LEPBI_I3167 - hypothetical protein 3086 37.41 0 3281400..3282062 + 220 183222513 - LEPBI_I3168 - hypothetical protein 3087 38.12 0 3282240..3282824 - 194 183222514 - LEPBI_I3169 - hypothetical protein 3088 38.93 0 3282821..3283570 - 249 183222515 - LEPBI_I3170 - putative D-alanyl-D-alanine dipeptidase VanX; putative signal peptide 3089 38.75 0 3283591..3284457 - 288 183222516 - LEPBI_I3171 - putative vancomycin B-type resistance protein VanW 3090 38.01 0 3284447..3285730 - 427 183222517 - LEPBI_I3172 - hypothetical protein 3091 37.43 0 3285736..3287028 - 430 183222518 - LEPBI_I3173 - hypothetical protein 3092 40.32 0 3287096..3287410 - 104 183222519 trxA1 LEPBI_I3174 - thioredoxin 1 (TRX-1) 3093 35.49 0 3287569..3288216 + 215 183222520 - LEPBI_I3175 - putative cyclic nucleotide-binding protein 38.82 MEAN 4.08 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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