version 1.0
Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome I, complete sequence - 1..3599677 3391 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 254 37.26 0 247670..249424 - 584 183219681 - LEPBI_I0256 - hypothetical protein 255 39.02 0 249557..251368 - 603 183219682 ftsI LEPBI_I0257 - peptidoglycan synthetase FtsI (penicillin-binding protein 3; PBP-3) 256 39.83 0 251371..251970 - 199 183219683 lepB1 LEPBI_I0258 - Signal peptidase I 257 45.19 +1 252066..253415 + 449 183219684 thrC LEPBI_I0259 - threonine synthase 258 36.39 0 253523..254176 + 217 183219685 - LEPBI_I0260 - hypothetical protein 259 41.95 0 254179..255339 + 386 183219686 - LEPBI_I0261 - hypothetical protein 260 43.20 +1 255488..258091 - 867 183219687 leuS LEPBI_I0262 - leucyl-tRNA synthetase 261 37.21 0 258095..258223 - 42 183219688 - LEPBI_I0263 - hypothetical protein 262 29.39 -2 258419..258646 + 75 183219689 - LEPBI_I0264 - hypothetical protein 263 39.10 0 258646..259443 + 265 183219690 lolD LEPBI_I0265 - ABC-type transport system, ATPase 264 42.32 0 259440..261986 + 848 183219691 - LEPBI_I0266 - putative permease; putative membrane protein 265 39.20 0 262046..262948 - 300 183219692 - LEPBI_I0267 - putative signal peptide 266 42.64 0 263176..264045 + 289 183219693 dnaC LEPBI_I0269 - DNA replication protein DnaC 267 39.03 0 264050..264523 + 157 183219694 folK LEPBI_I0270 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 268 44.98 +1 264498..265304 + 268 183219695 panB LEPBI_I0271 - 3-methyl-2-oxobutanoate hydroxymethyltransferase 269 41.90 0 265448..266497 - 349 183219696 aroH LEPBI_I0272 - phospho-2-dehydro-3-deoxyheptonate aldolase, Trp-sensitive 270 42.98 +1 266500..266841 - 113 183219697 - LEPBI_I0273 - hypothetical protein 271 41.77 0 266841..268784 - 647 183219698 - LEPBI_I0274 - heme ABC transporter ATP binding protein 272 38.27 0 268834..268995 - 53 183219699 - LEPBI_I0275 - hypothetical protein 273 37.04 0 269106..269942 + 278 183219700 - LEPBI_I0276 - hypothetical protein 274 38.65 0 269927..270340 - 137 183219701 - LEPBI_I0277 - hypothetical protein 275 39.68 0 270473..270913 + 146 183219702 - LEPBI_I0278 - hypothetical protein 276 35.61 0 270945..271472 + 175 183219703 - LEPBI_I0279 - hypothetical protein 277 37.53 0 271478..272455 + 325 183219704 - LEPBI_I0280 - hypothetical protein 278 42.26 0 272513..273319 + 268 183219705 - LEPBI_I0281 - EAL domain-containing protein 279 38.23 0 273356..274540 - 394 183219706 - LEPBI_I0282 - hypothetical protein 280 38.81 0 274593..275267 + 224 183219707 - LEPBI_I0283 - putative polyketide biosynthesis associated protein 281 40.27 0 275329..278415 + 1028 183219708 acrF LEPBI_I0284 - acriflavin resistance protein F 282 38.18 0 278482..279513 - 343 183219709 - LEPBI_I0285 - hypothetical protein 283 40.42 0 279645..281393 + 582 183219710 choB LEPBI_I0286 - cholesterol oxidase 284 39.36 0 281399..282310 + 303 183219711 - LEPBI_I0287 - ankyrin repeat-containing protein 285 38.84 0 282338..283990 - 550 183219712 - LEPBI_I0288 - hypothetical protein 286 34.92 0 284066..284317 - 83 183219713 - LEPBI_I0289 - hypothetical protein 287 38.38 0 284399..285784 - 461 183219714 trmE LEPBI_I0290 - GTPase involved in tRNA modification and in thiophene and furan oxidation 288 40.30 0 285777..286508 - 243 183219715 - LEPBI_I0291 - hypothetical protein 289 39.13 0 286537..288486 - 649 183219716 oxaA LEPBI_I0292 - inner membrane protein OxaA; putative membrane protein 290 40.35 0 288490..288717 - 75 183219717 - LEPBI_I0293 - hypothetical protein 291 41.65 0 289454..290608 + 384 183219718 - LEPBI_I0294 - putative membrane-bound lytic murein transglycosylase 292 37.48 0 290639..291217 - 192 183219719 - LEPBI_I0295 - TetR family transcriptional regulator 293 37.29 0 291424..292080 + 218 183219720 - LEPBI_I0296 - hypothetical protein 294 33.50 -1 292064..292672 + 202 183219721 gstA LEPBI_I0297 - glutathione transferase 295 36.80 0 292658..293581 - 307 183219722 - LEPBI_I0298 - cation efflux protein; putative membrane protein 296 34.50 -1 293712..295604 - 630 183219723 - LEPBI_I0299 - hypothetical protein 297 44.12 +1 295693..296202 + 169 183219724 - LEPBI_I0300 - Acetyl-CoA hydrolase 298 33.95 -1 296199..296522 - 107 183219725 - LEPBI_I0301 - hypothetical protein 299 37.24 0 296545..297159 - 204 183219726 - LEPBI_I0302 - putative S-adenosyl-L-methionine-dependent methyltransferase 300 41.48 0 297149..298375 - 408 183219727 - LEPBI_I0303 - major facilitator superfamily permease 301 40.49 0 298459..299031 - 190 183219728 - LEPBI_I0304 - carbonic anhydrase/acetyltransferase 302 34.86 0 299041..301002 - 653 183219729 - LEPBI_I0305 - putative phosphoserine phosphatase; putative membrane protein 303 38.96 0 301050..303449 - 799 183219730 pheT LEPBI_I0306 - phenylalanyl-tRNA synthetase beta chain (phenylalanine--tRNA ligase beta chain; PheRS) 304 41.87 0 303492..305576 - 694 183219731 - LEPBI_I0307 - hypothetical protein 305 41.77 0 305566..306810 - 414 183219732 pyrC LEPBI_I0308 - dihydroorotase-like protein 306 43.08 +1 306964..308820 - 618 183219733 recQ1 LEPBI_I0309 - ATP-dependent DNA helicase RecQ 307 38.60 0 308934..310490 + 518 183219734 algI LEPBI_I0310 - putative poly(beta-D-mannuronate) O-acetylase; putative membrane protein 308 39.44 0 310480..311757 + 425 183219735 - LEPBI_I0311 - putative signal peptide 309 44.31 +1 311817..313529 + 570 183219736 - LEPBI_I0312 - putative signal peptide 310 42.90 0 313930..314295 + 121 183219737 - LEPBI_I0313 - putative signal peptide 311 41.39 0 314408..315139 + 243 183219738 ftsQ LEPBI_I0314 - cell division protein FtsQ 312 42.70 0 315141..316379 + 412 183219739 ftsA1 LEPBI_I0315 - cell division protein FtsA 313 43.66 +1 316390..317580 + 396 183219740 ftsZ LEPBI_I0316 - cell division initiation protein FtsZ (septum formation) 314 42.15 0 317596..319002 - 468 183219741 - LEPBI_I0317 - hypothetical protein 315 39.55 0 319019..319597 - 192 183219742 - LEPBI_I0318 - hypothetical protein 316 40.56 0 319633..320172 - 179 183219743 - LEPBI_I0319 - hypothetical protein 317 39.34 0 320351..320866 + 171 183219744 - LEPBI_I0320 - hypothetical protein 318 41.84 0 320886..321872 + 328 183219745 nadA LEPBI_I0321 - quinolinate synthetase A protein 319 43.97 +1 321874..322362 + 162 183219746 ispF LEPBI_I0322 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 320 41.07 0 322365..322907 - 180 183219747 - LEPBI_I0323 - hypothetical protein 321 38.02 0 322958..324943 + 661 183219748 - LEPBI_I0324 - putative phosphoserine phosphatase 322 35.73 0 325017..325976 + 319 183219749 - LEPBI_I0325 - putative hydrolase 323 36.80 0 325980..326990 + 336 183219750 dppB LEPBI_I0326 - ABC-type transport system, permease component; putative signal peptide 324 37.33 0 326987..328036 + 349 183219751 dppC LEPBI_I0327 - ABC-type transport system, permease component 325 37.17 0 328033..329022 + 329 183219752 dppD LEPBI_I0328 - phosphate ABC transporter ATPase 326 38.04 0 329015..329971 + 318 183219753 dppF LEPBI_I0329 - oligopetide ABC-type transport system, ATPase 327 33.85 -1 329979..332087 + 702 183219754 - LEPBI_I0330 - hypothetical protein 328 33.22 -1 332125..333816 - 563 183219755 - LEPBI_I0331 - hypothetical protein 329 37.08 0 333830..334870 - 346 183219756 - LEPBI_I0332 - hypothetical protein 330 35.34 0 334985..336526 - 513 183219757 - LEPBI_I0334 - putative DNA mismatch repair protein; putative membrane protein 331 39.26 0 336738..337007 - 89 183219758 - LEPBI_I0335 - hypothetical protein 332 46.48 +1 337134..337346 + 70 183219759 - LEPBI_I0336 - hypothetical protein 333 41.39 0 337415..339463 + 682 183219760 fadD3 LEPBI_I0337 - long-chain-fatty-acid--CoA ligase 334 42.28 0 339504..340241 + 245 183219761 - LEPBI_I0338 - enoyl-CoA hydratase 335 37.09 0 340238..341089 + 283 183219762 - LEPBI_I0339 - hypothetical protein 336 41.30 0 341233..341571 + 112 183219763 - LEPBI_I0340 - putative 4-carboxymuconolactone decarboxylase 337 38.56 0 341575..342549 + 324 183219764 - LEPBI_I0341 - hypothetical protein 338 42.20 0 342550..343305 + 251 183219765 mapA LEPBI_I0342 - methionine aminopeptidase (MAP; peptidase M) 339 39.72 0 343465..344262 + 265 183219766 - LEPBI_I0343 - hypothetical protein 340 40.74 0 344381..344785 + 134 183219767 - LEPBI_I0344 - hypothetical protein 341 45.51 +1 344782..345783 - 333 183219768 gpsA2 LEPBI_I0345 - glycerol-3-phosphate dehydrogenase [NAD(P)+] (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) 342 37.59 0 345840..346520 + 226 183219769 - LEPBI_I0346 - hypothetical protein 343 38.31 0 346521..347525 + 334 183219770 - LEPBI_I0347 - hypothetical protein 344 37.81 0 347526..347927 + 133 183219771 - LEPBI_I0348 - putative signal peptide 345 38.86 0 347933..349993 + 686 183219772 recG LEPBI_I0349 - ATP-dependent DNA helicase RecG 346 37.58 0 350008..350808 + 266 183219773 - LEPBI_I0350 - putative D-alanyl-D-alanine carboxypeptidase 347 39.53 0 350803..351771 - 322 183219774 galE LEPBI_I0351 - UDP-glucose 4-epimerase (galactowaldenase; UDP-galactose 4-epimerase) 348 41.88 0 351768..352574 - 268 183219775 lpxA LEPBI_I0352 - Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 349 40.62 0 352674..353030 + 118 183219776 - LEPBI_I0353 - hypothetical protein 350 43.67 +1 353031..354452 - 473 183219777 - LEPBI_I0354 - hypothetical protein 351 44.59 +1 354518..355699 + 393 183219778 thiL1 LEPBI_I0355 - putative acetyl-CoA acetyltransferase (acetoacetyl-CoA thiolase) 352 40.20 0 355772..357373 + 533 183219779 - LEPBI_I0356 - putative transferase 353 35.13 0 357374..360439 + 1021 183219780 - LEPBI_I0357 - ABC-type transport system, ATPase 38.82 MEAN 4.08 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0