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Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome I, complete sequence - 1..3599677 3391 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2523 43.83 +1 2677486..2678247 - 253 183221950 fabG LEPBI_I2590 - 3-oxoacyl-[acyl-carrier-protein] reductase (3-ketoacyl-acyl carrier protein reductase) 2524 44.18 +1 2678467..2679489 - 340 183221951 plsX LEPBI_I2591 - Fatty acid/phospholipid synthesis protein PlsX 2525 43.90 +1 2679763..2680377 - 204 183221952 hisG LEPBI_I2593 - ATP phosphoribosyltransferase 2526 36.95 0 2680381..2681127 - 248 183221953 - LEPBI_I2594 - hypothetical protein 2527 42.39 0 2681132..2682832 - 566 183221954 rpsA LEPBI_I2595 - 30S ribosomal protein S1 2528 46.75 +1 2682853..2683605 - 250 183221955 cmk LEPBI_I2596 - cytidylate kinase 2529 37.34 0 2683764..2685311 + 515 183221956 - LEPBI_I2597 - putative signal transduction histidine kinase 2530 42.89 0 2685297..2686583 - 428 183221957 aroA LEPBI_I2598 - 3-phosphoshikimate 1-carboxyvinyltransferase 2531 39.48 0 2686671..2689208 + 845 183221958 - LEPBI_I2599 - hypothetical protein 2532 36.32 0 2689247..2690149 + 300 183221959 - LEPBI_I2600 - putative thioredoxin-disulfide reductase 2533 41.78 0 2690150..2690836 - 228 183221960 - LEPBI_I2601 - hypothetical protein 2534 40.49 0 2690920..2691324 + 134 183221961 - LEPBI_I2602 - hypothetical protein 2535 39.39 0 2691325..2691819 + 164 183221962 - LEPBI_I2603 - hypothetical protein 2536 38.55 0 2691816..2692313 - 165 183221963 - LEPBI_I2604 - TPR repeat-containing protein 2537 43.92 +1 2692366..2694255 - 629 183221964 dxs LEPBI_I2605 - 1-deoxy-D-xylulose-5-phosphate synthase 2538 40.42 0 2694263..2696590 - 775 183221965 - LEPBI_I2606 - putative adenylate/guanylate cyclase; putative membrane protein 2539 40.20 0 2696681..2697481 - 266 183221966 trpA LEPBI_I2607 - tryptophan synthase alpha protein 2540 43.16 +1 2697478..2698668 - 396 183221967 trpB LEPBI_I2608 - tryptophan synthase subunit beta 2541 41.79 0 2698866..2700626 - 586 183221968 proS LEPBI_I2609 - prolyl-tRNA synthetase (proline--tRNA ligase; ProRS) 2542 39.89 0 2700674..2702380 - 568 183221969 - LEPBI_I2610 - membrane-associated Zn-dependent metalloprotease 2543 43.76 +1 2702377..2703537 - 386 183221970 dxr LEPBI_I2611 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase 2 2544 39.91 0 2703568..2704479 - 303 183221971 cdsA LEPBI_I2612 - phosphatidate cytidylyltransferase (CDP-diglyceride synthetase) 2545 40.90 0 2704476..2705189 - 237 183221972 uppS LEPBI_I2613 - undecaprenyl pyrophosphate synthetase 2546 39.31 0 2705196..2705747 - 183 183221973 frr LEPBI_I2614 - ribosome recycling factor (ribosome releasing factor; RRF) 2547 43.24 +1 2705737..2706483 - 248 183221974 pyrH LEPBI_I2615 - uridylate kinase 2548 43.72 +1 2706473..2707069 - 198 183221975 tsf LEPBI_I2616 - elongation factor Ts (EF-Ts) 2549 39.87 0 2707069..2707971 - 300 183221976 rpsB LEPBI_I2617 - 30S ribosomal protein S2 2550 42.31 0 2707974..2708207 - 77 183221977 - LEPBI_I2618 - putative signal peptide 2551 38.44 0 2708807..2710999 + 730 183221978 tpsA LEPBI_I2619 - trehalose-6-phosphate synthase 2552 36.20 0 2710980..2712758 + 592 183221979 - LEPBI_I2620 - putative glycosyl hydrolase 2553 33.66 -1 2712889..2715936 + 1015 183221980 - LEPBI_I2621 - putative two-component sensor histidine kinase 2554 40.52 0 2716017..2716364 - 115 183221981 - LEPBI_I2622 - hypothetical protein 2555 26.60 -2 2716363..2716659 + 98 183221982 - LEPBI_Ia2609 - hypothetical protein 2556 33.84 -1 2716702..2717097 + 131 183221983 - LEPBI_I2623 - hypothetical protein 2557 35.98 0 2717136..2718005 + 289 183221984 - LEPBI_I2624 - putative transcriptional regulator, AraC-type 2558 36.81 0 2718163..2718996 + 277 183221985 - LEPBI_I2625 - hypothetical protein 2559 37.76 0 2719237..2720817 + 526 183221986 - LEPBI_I2626 - putative methyl-accepting chemotaxis protein (MCP); putative membrane protein 2560 38.57 0 2720913..2722133 + 406 183221987 - LEPBI_I2628 - hypothetical protein 2561 39.56 0 2722154..2722603 - 149 183221988 - LEPBI_I2629 - rhodanese-like domain-containing protein 2562 38.63 0 2722656..2723372 + 238 183221989 - LEPBI_I2630 - putative hydroxyacylglutathione hydrolase 2563 41.53 0 2723369..2723734 + 121 183221990 - LEPBI_I2631 - hypothetical protein 2564 40.29 0 2723750..2724310 + 186 183221991 - LEPBI_I2632 - hypothetical protein 2565 37.57 0 2724376..2725059 + 227 183221992 msrA2 LEPBI_I2633 - peptide methionine sulfoxide reductase MsrA (protein-methionine-S-oxide reductase; peptide Met(O) reductase) 2566 35.11 0 2725034..2726554 - 506 183221993 - LEPBI_I2634 - hypothetical protein 2567 37.46 0 2726748..2727377 - 209 183221994 - LEPBI_I2635 - putative signal peptide 2568 44.21 +1 2727372..2730560 + 1062 183221995 - LEPBI_I2636 - hypothetical protein 2569 39.58 0 2730592..2731632 - 346 183221996 - LEPBI_I2637 - putative strictosidine synthase; putative signal peptide 2570 36.29 0 2731629..2732507 - 292 183221997 - LEPBI_I2638 - putative acyltransferase 2571 36.22 0 2732509..2733753 - 414 183221998 - LEPBI_I2639 - putative serine phosphatase 2572 39.94 0 2733766..2734128 - 120 183221999 - LEPBI_I2640 - hypothetical protein 2573 36.36 0 2734130..2734987 - 285 183222000 - LEPBI_I2641 - putative short chain dehydrogenase 2574 35.86 0 2734984..2736765 - 593 183222001 - LEPBI_I2642 - putative signal transduction histidine kinase; putative membrane protein 2575 42.55 0 2736767..2737135 - 122 183222002 - LEPBI_I2643 - hypothetical protein 2576 36.89 0 2737141..2737365 - 74 183222003 - LEPBI_I2644 - hypothetical protein 2577 46.09 +1 2737362..2737745 - 127 183222004 acpS LEPBI_I2645 - Holo-[acyl-carrier-protein] synthase (Holo-ACP synthase; 4'-phosphopantetheinyl transferase AcpS) 2578 34.47 -1 2737748..2743468 - 1906 183222005 - LEPBI_I2646 - putative serine/threonine protein kinase 2579 39.35 0 2743478..2744242 - 254 183222006 fabG5 LEPBI_I2647 - 3-oxoacyl-[acyl-carrier protein] reductase 2580 35.62 0 2744239..2745507 - 422 183222007 - LEPBI_I2648 - hypothetical protein 2581 41.67 0 2745601..2746032 - 143 183222008 - LEPBI_I2649 - UspA-like DNA binding protein 2582 43.28 +1 2746185..2746988 - 267 183222009 - LEPBI_I2650 - ABC-type transport system, permease, putative sperimidine/putrescine transport protein PotC; putative membrane protein 2583 40.52 0 2746978..2747895 - 305 183222010 - LEPBI_I2651 - ABC-type transport system, permease, putative sperimidine/putrescine transport protein PotH; putative membrane protein 2584 42.01 0 2747906..2748931 - 341 183222011 - LEPBI_I2652 - putrescine ABC transporter ATP-binding protein 2585 41.03 0 2748966..2750135 - 389 183222012 - LEPBI_I2653 - putative spermidine/putrescine-binding periplasmic protein PotF/PotD; putative signal peptide 2586 46.09 +1 2750274..2751731 + 485 183222013 gabD LEPBI_I2654 - succinate-semialdehyde dehydrogenase [NADP+] (SSDH) 2587 45.58 +1 2751728..2753017 + 429 183222014 gabT LEPBI_I2655 - 4-aminobutyrate aminotransferase 2588 45.44 +1 2753025..2754470 + 481 183222015 - LEPBI_I2656 - putative betaine aldehyde dehydrogenase 2589 40.84 0 2754496..2755827 + 443 183222016 - LEPBI_I2657 - hypothetical protein 2590 42.28 0 2755872..2756519 - 215 183222017 - LEPBI_I2658 - putative signal peptide 2591 42.07 0 2756554..2757846 + 430 183222018 - LEPBI_I2660 - hypothetical protein 2592 43.01 +1 2757846..2758310 + 154 183222019 cheX LEPBI_I2661 - chemotaxis protein 2593 38.52 0 2758383..2759327 - 314 183222020 - LEPBI_I2662 - hypothetical protein 2594 39.92 0 2759324..2760052 - 242 183222021 - LEPBI_I2663 - hypothetical protein 2595 41.68 0 2760057..2761913 - 618 183222022 - LEPBI_I2664 - hypothetical protein 2596 44.24 +1 2761964..2763604 + 546 183222023 ybiT LEPBI_I2665 - ABC-type transport system, ATP-binding component 2597 40.13 0 2763601..2764659 - 352 183222024 - LEPBI_I2666 - hypothetical protein 2598 38.67 0 2764769..2765311 - 180 183222025 - LEPBI_I2667 - putative HAM1-related protein 2599 38.14 0 2765362..2765652 - 96 183222026 - LEPBI_I2668 - putative anti-sigma factor antagonist 2600 39.94 0 2765690..2766400 - 236 183222027 - LEPBI_I2669 - putative competence-related protein 2601 39.24 0 2766450..2767532 - 360 183222028 - LEPBI_I2670 - putative signal peptide 2602 36.92 0 2767597..2768238 + 213 183222029 - LEPBI_I2671 - hypothetical protein 2603 43.42 +1 2768328..2768783 + 151 183222030 - LEPBI_I2672 - hypothetical protein 2604 36.24 0 2768834..2770174 - 446 183222031 - LEPBI_I2673 - hypothetical protein 2605 38.10 0 2770341..2772104 - 587 183222032 lntB LEPBI_I2674 - apolipoprotein N-acyltransferase 2 (ALP N-acyltransferase 2); putative membrane protein 2606 42.10 0 2772129..2773166 - 345 183222033 - LEPBI_I2675 - putative signal peptide 2607 40.55 0 2773207..2773788 - 193 183222034 - LEPBI_I2676 - CarD family transcriptional regulator 2608 44.17 +1 2773873..2774490 - 205 183222035 - LEPBI_I2677 - hypothetical protein 2609 34.12 -1 2774650..2775540 + 296 183222036 - LEPBI_I2678 - hypothetical protein 2610 34.93 0 2775657..2776283 + 208 183222037 - LEPBI_I2679 - putative methyltransferase 2611 36.35 0 2776290..2778242 - 650 183222038 - LEPBI_I2680 - hypothetical protein 2612 40.37 0 2778311..2778907 - 198 183222039 ctaF LEPBI_I2681 - cytochrome c oxidase polypeptide IVB (cytochrome aa3 subunit 4B; Caa-3605 subunit 4B) 2613 43.28 +1 2778921..2779694 - 257 183222040 ctaE LEPBI_I2682 - cytochrome c oxidase polypeptide III (cytochrome aa3 subunit 3; oxidase aa(3) subunit 3) 2614 45.29 +1 2779681..2781294 - 537 183222041 ctaD LEPBI_I2683 - cytochrome c oxidase polypeptide I 2615 42.58 0 2781304..2782266 - 320 183222042 ctaC LEPBI_I2684 - cytochrome c oxidase polypeptide II (cytochrome aa3 subunit 2; oxidase aa(3) subunit 2) 2616 41.94 0 2782267..2783103 - 278 183222043 - LEPBI_I2685 - putative protein involved in the biogenesis of respiratory; putative signal peptide 2617 40.23 0 2783398..2784282 + 294 183222044 ctaA LEPBI_I2686 - cytochrome oxidase assembly protein; putative membrane protein 2618 41.49 0 2784279..2785136 + 285 183222045 ctaB LEPBI_I2687 - Protoheme IX farnesyltransferase (Heme O synthase); putative membrane protein; putative signal peptide 2619 39.46 0 2785146..2785847 + 233 183222046 - LEPBI_I2688 - hypothetical protein 2620 44.19 +1 2785847..2786776 + 309 183222047 - LEPBI_I2689 - hypothetical protein 2621 36.16 0 2786874..2788958 - 694 183222048 - LEPBI_I2690 - putative phosphoserine phosphatase; putative membrane protein 2622 39.50 0 2788975..2790255 - 426 183222049 gltA2 LEPBI_I2691 - citrate synthase 1 38.82 MEAN 4.08 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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