version 1.0
Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome I, complete sequence - 1..3599677 3391 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2457 43.55 +1 2604043..2605197 + 384 183221884 - LEPBI_I2520 - putative cAMP-dependent protein kinase 2458 43.16 +1 2605243..2606361 + 372 183221885 - LEPBI_I2521 - putative phopholipase 2459 45.13 +1 2606458..2608152 + 564 183221886 - LEPBI_I2522 - hypothetical protein 2460 36.56 0 2608153..2608617 + 154 183221887 - LEPBI_I2523 - hypothetical protein 2461 38.15 0 2608951..2609220 + 89 183221888 - LEPBI_I2524 - hypothetical protein 2462 33.09 -1 2609438..2612692 + 1084 183221889 - LEPBI_I2525 - putative adenylate cyclase; putative membrane protein 2463 34.12 -1 2612685..2613323 + 212 183221890 - LEPBI_I2526 - putative two-component response regulator 2464 32.82 -1 2613320..2615269 + 649 183221891 - LEPBI_I2527 - hypothetical protein 2465 50.31 +2 2615897..2616055 + 52 183221892 - LEPBI_I2528 - hypothetical protein 2466 30.83 -1 2616328..2617206 - 292 183221893 - LEPBI_I2529 - hypothetical protein 2467 32.69 -1 2617277..2618362 - 361 183221894 - LEPBI_I2530 - hypothetical protein 2468 33.07 -1 2618364..2619509 - 381 183221895 - LEPBI_I2531 - hypothetical protein 2469 41.29 0 2623360..2623560 - 66 183221896 - LEPBI_I2535 - hypothetical protein 2470 38.10 0 2623843..2624871 + 342 183221897 - LEPBI_I2536 - putative signal peptide 2471 37.85 0 2624881..2626608 + 575 183221898 - LEPBI_I2537 - hypothetical protein 2472 36.39 0 2626746..2627660 - 304 183221899 - LEPBI_I2538 - alpha/beta family hydrolase 2473 39.63 0 2627659..2628405 + 248 183221900 - LEPBI_I2539 - hypothetical protein 2474 42.04 0 2628472..2628942 + 156 183221901 - LEPBI_I2540 - Dps family DNA-binding stress response protein 2475 38.35 0 2628977..2629774 - 265 183221902 - LEPBI_I2541 - putative esterase/lipase 2476 36.13 0 2629809..2630882 - 357 183221903 - LEPBI_I2542 - hypothetical protein 2477 42.94 +1 2631001..2632218 - 405 183221904 aatA LEPBI_I2543 - aspartate aminotransferase A (transaminase A; AspAT) 2478 42.52 0 2632227..2633924 - 565 183221905 - LEPBI_I2544 - putative DNA repair helicase 2479 44.14 +1 2634292..2635263 - 323 183221906 dusA LEPBI_I2545 - tRNA-dihydrouridine synthase A 2480 43.45 +1 2635274..2637388 - 704 183221907 flhA LEPBI_I2546 - flagellar biosynthesis protein FlhA; putative membrane protein 2481 42.99 +1 2637393..2638604 - 403 183221908 flhB LEPBI_I2547 - flagellar biosynthetic protein FlhB; putative membrane protein 2482 41.51 0 2638724..2639506 - 260 183221909 fliR LEPBI_I2548 - flagellar biosynthetic protein FliR 2483 39.39 0 2639508..2639771 - 87 183221910 fliQ LEPBI_I2549 - flagellar biosynthetic protein FliQ 2484 38.64 0 2639768..2640577 - 269 183221911 fliP LEPBI_I2550 - flagellar biosynthetic protein FliP; putative membrane protein; putative signal peptide 2485 41.43 0 2640574..2641425 - 283 183221912 - LEPBI_I2551 - putative flagellar biogenesis protein FliO 2486 46.50 +1 2641422..2642492 - 356 183221913 fliY LEPBI_I2552 - flagellar motor switch protein FliY 2487 48.15 +2 2642589..2642912 - 107 183221914 - LEPBI_I2553 - hypothetical protein 2488 40.36 0 2642914..2645160 - 748 183221915 - LEPBI_I2554 - bifunctional Sodium:alanine symporter/phosphatidylserine decarboxylase proenzyme/putative membrane protein 2489 39.03 0 2645196..2646020 + 274 183221916 - LEPBI_I2555 - hypothetical protein 2490 34.17 -1 2646059..2646298 + 79 183221917 - LEPBI_I2556 - hypothetical protein 2491 37.64 0 2646295..2646642 + 115 183221918 - LEPBI_I2557 - putative arsenate reductase-like protein 2492 31.24 -1 2646643..2647071 + 142 183221919 - LEPBI_I2558 - hypothetical protein 2493 38.53 0 2647076..2648095 - 339 183221920 lpxD LEPBI_I2559 - UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 2494 34.39 -1 2648299..2648676 + 125 183221921 - LEPBI_I2560 - hypothetical protein 2495 35.39 0 2648673..2649206 - 177 183221922 - LEPBI_I2561 - hypothetical protein 2496 31.68 -1 2649214..2650485 - 423 183221923 - LEPBI_I2562 - hypothetical protein 2497 36.64 0 2650501..2651226 - 241 183221924 - LEPBI_I2563 - putative glycosyl transferase 2498 39.84 0 2651204..2652493 - 429 183221925 - LEPBI_I2564 - hypothetical protein 2499 40.80 0 2652529..2653425 - 298 183221926 - LEPBI_I2565 - putative thiosulfate sulfurtransferase; putative signal peptide 2500 40.25 0 2653566..2654042 + 158 183221927 - LEPBI_I2566 - hypothetical protein 2501 41.69 0 2654066..2655250 - 394 183221928 - LEPBI_I2567 - putative Cys/Met metabolism PLP-dependent enzyme 2502 40.18 0 2655335..2656006 - 223 183221929 - LEPBI_I2568 - ABC-type transport system, ATP binding protein; putative lipoprotein-releasing system ATP-binding protein LolD 2503 40.83 0 2656003..2657256 - 417 183221930 - LEPBI_I2569 - ABC-type transport system, permease; putative membrane protein 2504 40.44 0 2657257..2658030 - 257 183221931 - LEPBI_I2570 - putative signal peptide 2505 38.99 0 2658081..2659370 - 429 183221932 - LEPBI_I2571 - hypothetical protein 2506 36.79 0 2659367..2660146 - 259 183221933 - LEPBI_I2572 - putative signal peptide 2507 39.77 0 2660143..2660577 - 144 183221934 - LEPBI_I2573 - hypothetical protein 2508 42.31 0 2660602..2663151 - 849 183221935 clpC LEPBI_I2574 - ATPase ClpC, ATP-binding subunit 2509 40.18 0 2663212..2663985 - 257 183221936 - LEPBI_I2575 - hypothetical protein 2510 43.63 +1 2663982..2664680 - 232 183221937 - LEPBI_I2576 - ABC-type transport system, ATP binding protein 2511 43.75 +1 2664673..2666025 - 450 183221938 - LEPBI_I2577 - putative lipoprotein releasing system transmembrane protein LolC; putative membrane protein 2512 41.13 0 2666086..2667072 + 328 183221939 - LEPBI_I2578 - hypothetical protein 2513 33.53 -1 2667078..2668097 + 339 183221940 - LEPBI_I2579 - putative signal peptide 2514 37.76 0 2668181..2668813 - 210 183221941 - LEPBI_I2580 - putative signal peptide 2515 35.45 0 2668896..2669792 - 298 183221942 - LEPBI_I2581 - putative small conductance mechanosensitive ion channel; putative membrane protein 2516 39.33 0 2669785..2670885 - 366 183221943 aroB2 LEPBI_I2582 - 3-dehydroquinate synthase 2517 37.20 0 2670882..2671346 - 154 183221944 - LEPBI_I2583 - ADP-ribose phosphorylase 2518 41.15 0 2671343..2672071 - 242 183221945 rnc LEPBI_I2584 - ribonuclease III 2519 37.18 0 2672125..2672358 - 77 183221946 acpP LEPBI_I2585 - Acyl carrier protein (ACP) 2520 42.57 0 2672735..2674228 + 497 183221947 - LEPBI_I2586 - hypothetical protein 2521 37.36 0 2674336..2676246 + 636 183221948 - LEPBI_I2587 - hypothetical protein 2522 37.25 0 2676243..2677364 + 373 183221949 - LEPBI_I2588 - hypothetical protein 2523 43.83 +1 2677486..2678247 - 253 183221950 fabG LEPBI_I2590 - 3-oxoacyl-[acyl-carrier-protein] reductase (3-ketoacyl-acyl carrier protein reductase) 2524 44.18 +1 2678467..2679489 - 340 183221951 plsX LEPBI_I2591 - Fatty acid/phospholipid synthesis protein PlsX 2525 43.90 +1 2679763..2680377 - 204 183221952 hisG LEPBI_I2593 - ATP phosphoribosyltransferase 2526 36.95 0 2680381..2681127 - 248 183221953 - LEPBI_I2594 - hypothetical protein 2527 42.39 0 2681132..2682832 - 566 183221954 rpsA LEPBI_I2595 - 30S ribosomal protein S1 2528 46.75 +1 2682853..2683605 - 250 183221955 cmk LEPBI_I2596 - cytidylate kinase 2529 37.34 0 2683764..2685311 + 515 183221956 - LEPBI_I2597 - putative signal transduction histidine kinase 2530 42.89 0 2685297..2686583 - 428 183221957 aroA LEPBI_I2598 - 3-phosphoshikimate 1-carboxyvinyltransferase 2531 39.48 0 2686671..2689208 + 845 183221958 - LEPBI_I2599 - hypothetical protein 2532 36.32 0 2689247..2690149 + 300 183221959 - LEPBI_I2600 - putative thioredoxin-disulfide reductase 2533 41.78 0 2690150..2690836 - 228 183221960 - LEPBI_I2601 - hypothetical protein 2534 40.49 0 2690920..2691324 + 134 183221961 - LEPBI_I2602 - hypothetical protein 2535 39.39 0 2691325..2691819 + 164 183221962 - LEPBI_I2603 - hypothetical protein 2536 38.55 0 2691816..2692313 - 165 183221963 - LEPBI_I2604 - TPR repeat-containing protein 2537 43.92 +1 2692366..2694255 - 629 183221964 dxs LEPBI_I2605 - 1-deoxy-D-xylulose-5-phosphate synthase 2538 40.42 0 2694263..2696590 - 775 183221965 - LEPBI_I2606 - putative adenylate/guanylate cyclase; putative membrane protein 2539 40.20 0 2696681..2697481 - 266 183221966 trpA LEPBI_I2607 - tryptophan synthase alpha protein 2540 43.16 +1 2697478..2698668 - 396 183221967 trpB LEPBI_I2608 - tryptophan synthase subunit beta 2541 41.79 0 2698866..2700626 - 586 183221968 proS LEPBI_I2609 - prolyl-tRNA synthetase (proline--tRNA ligase; ProRS) 2542 39.89 0 2700674..2702380 - 568 183221969 - LEPBI_I2610 - membrane-associated Zn-dependent metalloprotease 2543 43.76 +1 2702377..2703537 - 386 183221970 dxr LEPBI_I2611 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase 2 2544 39.91 0 2703568..2704479 - 303 183221971 cdsA LEPBI_I2612 - phosphatidate cytidylyltransferase (CDP-diglyceride synthetase) 2545 40.90 0 2704476..2705189 - 237 183221972 uppS LEPBI_I2613 - undecaprenyl pyrophosphate synthetase 2546 39.31 0 2705196..2705747 - 183 183221973 frr LEPBI_I2614 - ribosome recycling factor (ribosome releasing factor; RRF) 2547 43.24 +1 2705737..2706483 - 248 183221974 pyrH LEPBI_I2615 - uridylate kinase 2548 43.72 +1 2706473..2707069 - 198 183221975 tsf LEPBI_I2616 - elongation factor Ts (EF-Ts) 2549 39.87 0 2707069..2707971 - 300 183221976 rpsB LEPBI_I2617 - 30S ribosomal protein S2 2550 42.31 0 2707974..2708207 - 77 183221977 - LEPBI_I2618 - putative signal peptide 2551 38.44 0 2708807..2710999 + 730 183221978 tpsA LEPBI_I2619 - trehalose-6-phosphate synthase 2552 36.20 0 2710980..2712758 + 592 183221979 - LEPBI_I2620 - putative glycosyl hydrolase 2553 33.66 -1 2712889..2715936 + 1015 183221980 - LEPBI_I2621 - putative two-component sensor histidine kinase 2554 40.52 0 2716017..2716364 - 115 183221981 - LEPBI_I2622 - hypothetical protein 2555 26.60 -2 2716363..2716659 + 98 183221982 - LEPBI_Ia2609 - hypothetical protein 2556 33.84 -1 2716702..2717097 + 131 183221983 - LEPBI_I2623 - hypothetical protein 38.82 MEAN 4.08 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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