version 1.0
Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome I, complete sequence - 1..3599677 3391 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2338 39.94 0 2467261..2467578 - 105 183221765 - LEPBI_I2395 - hypothetical protein 2339 43.86 +1 2467584..2468096 - 170 183221766 - LEPBI_I2396 - hypothetical protein 2340 40.44 0 2468093..2468275 - 60 183221767 - LEPBI_I2397 - hypothetical protein 2341 42.09 0 2468288..2468641 - 117 183221768 rplT LEPBI_I2398 - 50S ribosomal protein L20 2342 39.30 0 2468645..2468845 - 66 183221769 rpmI LEPBI_I2399 - 50S ribosomal protein L35 2343 43.26 +1 2468854..2469417 - 187 183221770 infC LEPBI_I2400 - translation initiation factor IF-3 2344 46.75 +1 2469507..2470430 - 307 183221771 - LEPBI_I2401 - hypothetical protein 2345 42.04 0 2470440..2472356 - 638 183221772 thrS LEPBI_I2402 - threonyl-tRNA synthetase (threonine--tRNA ligase; ThrRS) 2346 39.56 0 2472406..2472999 - 197 183221773 - LEPBI_I2403 - putative transcriptional regulator 2347 37.63 0 2472984..2473775 - 263 183221774 - LEPBI_I2404 - putative alpha/beta hydrolase; putative signal peptide 2348 34.27 -1 2474082..2475782 + 566 183221775 - LEPBI_I2405 - ABC-type transport system, permease and ATPase; putative membrane protein 2349 36.81 0 2475779..2479060 + 1093 183221776 - LEPBI_I2406 - putative cellobiose phosphorylase 2350 35.07 0 2479124..2479468 - 114 183221777 glnK LEPBI_I2407 - nitrogen regulatory protein P-II 2351 42.27 0 2479489..2480898 - 469 183221778 amtB2 LEPBI_I2408 - ammonium transporter 2352 37.36 0 2481168..2482658 + 496 183221779 phr LEPBI_I2409 - deoxyribodipyrimidine photo-lyase 2353 34.74 0 2482655..2482939 + 94 183221780 - LEPBI_I2410 - putative ATP-dependent Clp protease adaptor protein C 2354 34.57 -1 2482936..2483661 + 241 183221781 - LEPBI_I2411 - hypothetical protein 2355 37.42 0 2483658..2485712 - 684 183221782 - LEPBI_I2412 - putative adenylate or guanylate cyclase; putative membrane protein 2356 39.02 0 2485759..2487078 + 439 183221783 - LEPBI_I2413 - putative RNA methyltransferase 2357 39.45 0 2487129..2488256 + 375 183221784 - LEPBI_I2414 - putative signal peptide 2358 39.62 0 2488320..2489162 + 280 183221785 - LEPBI_I2415 - hypothetical protein 2359 35.69 0 2489169..2490401 - 410 183221786 - LEPBI_I2416 - putative adenylate or guanylate cyclase 2360 41.48 0 2490407..2491228 - 273 183221787 hycG LEPBI_I2417 - hydrogenase-4 subunit G 2361 36.48 0 2491225..2492652 - 475 183221788 hycE LEPBI_I2419 - hydrogenase-4 subunit E 2362 32.59 -1 2492649..2493857 - 402 183221789 hyfF LEPBI_I2420 - hydrogenase-4 subunit F 2363 33.66 -1 2493854..2494465 - 203 183221790 hyfE LEPBI_I2421 - hydrogenase-4 subunit E 2364 35.49 0 2494475..2495353 - 292 183221791 hycD LEPBI_I2422 - hydrogenase-4 subunit D 2365 32.82 -1 2495362..2497098 - 578 183221792 hycC LEPBI_I2423 - hydrogenase-4 subunit C; putative membrane protein 2366 35.60 0 2497476..2498180 + 234 183221793 - LEPBI_I2424 - ABC-type transport system, ATP binding protein 2367 30.38 -2 2498177..2500648 + 823 183221794 - LEPBI_I2425 - ABC-type transport system, permease; putative membrane protein 2368 34.78 0 2500687..2501586 + 299 183221795 - LEPBI_I2426 - hypothetical protein 2369 30.94 -1 2501608..2502360 - 250 183221796 - LEPBI_I2427 - hypothetical protein 2370 39.61 0 2502360..2502917 - 185 183221797 pyrE LEPBI_I2428 - orotate phosphoribosyltransferase (oprt; oprtase) 2371 41.70 0 2503338..2504006 + 222 183221798 - LEPBI_I2429 - TetR family transcriptional regulator 2372 39.21 0 2504007..2504993 - 328 183221799 - LEPBI_I2430 - putative di-haem cytochrome C peroxidase (CCP) 2373 38.06 0 2505275..2505634 + 119 183221800 - LEPBI_I2431 - hypothetical protein 2374 38.69 0 2505716..2506648 + 310 183221801 argF LEPBI_I2432 - ornithine carbamoyltransferase (OTCase) 2375 42.15 0 2506765..2507229 - 154 183221802 - LEPBI_I2433 - putative globin 2376 40.00 0 2507321..2507500 + 59 183221803 - LEPBI_I2434 - hypothetical protein 2377 41.19 0 2507491..2508483 + 330 183221804 - LEPBI_I2435 - putative malate synthase-like protein 2378 38.54 0 2508541..2510613 - 690 183221805 - LEPBI_I2436 - putative methyl-accepting chemotaxis protein McpB 2379 39.30 0 2510771..2511943 - 390 183221806 - LEPBI_I2437 - putative signal peptide 2380 39.02 0 2511985..2512635 - 216 183221807 - LEPBI_I2438 - hypothetical protein 2381 38.80 0 2512693..2513955 - 420 183221808 - LEPBI_I2439 - putative voltage-gated chloride channel protein; putative membrane protein; putative signal peptide 2382 37.93 0 2513991..2514164 + 57 183221809 - LEPBI_I2440 - hypothetical protein 2383 32.04 -1 2514225..2514998 - 257 183221810 - LEPBI_I2441 - hypothetical protein 2384 35.19 0 2515069..2517225 - 718 183221811 - LEPBI_I2442 - putative two-component response regulator 2385 37.28 0 2517368..2518813 - 481 183221812 - LEPBI_I2443 - putative apolipoprotein N-acyltransferase; putative membrane protein 2386 34.17 -1 2518810..2519523 - 237 183221813 - LEPBI_I2444 - hypothetical protein 2387 38.25 0 2519737..2520672 - 311 183221814 xerC LEPBI_I2445 - tyrosine recombinase XerC 2388 45.45 +1 2520970..2522133 + 387 183221815 recA LEPBI_I2446 - protein RecA (recombinase A) 2389 36.29 0 2522313..2523362 + 349 183221816 - LEPBI_I2447 - hypothetical protein 2390 37.92 0 2523373..2524200 - 275 183221817 dkgA LEPBI_I2448 - 2,5-diketo-D-gluconic acid reductase A 2391 38.69 0 2524272..2526659 - 795 183221818 clpB LEPBI_I2449 - chaperone ClpB 2392 34.20 -1 2526817..2528784 + 655 183221819 - LEPBI_I2450 - putative serine phosphatase RsbU regulator; putative membrane protein; putative signal peptide 2393 32.55 -1 2528788..2530959 - 723 183221820 - LEPBI_I2451 - putative two-component regulator 2394 32.40 -1 2531003..2532940 - 645 183221821 - LEPBI_I2452 - putative two-component regulator 2395 35.30 0 2532940..2533803 - 287 183221822 - LEPBI_I2453 - hypothetical protein 2396 36.04 0 2533827..2536340 - 837 183221823 - LEPBI_I2454 - putative cation-transporting ATPase; putative membrane protein 2397 35.93 0 2536393..2537742 + 449 183221824 - LEPBI_I2455 - putative peptidase 2398 36.53 0 2537719..2538906 - 395 183221825 - LEPBI_I2456 - putative hydroxypyruvate reductase 2399 36.56 0 2538911..2541172 - 753 183221826 - LEPBI_I2457 - putative thioredoxin-disulfide reductase; putative membrane protein 2400 33.10 -1 2541215..2542519 - 434 183221827 - LEPBI_I2458 - putative two-component sensor protein; putative membrane protein 2401 33.65 -1 2542516..2544405 - 629 183221828 - LEPBI_I2459 - putative serine phosphatase RsbU; putative membrane protein; putative signal peptide 2402 37.04 0 2544410..2544598 - 62 183221829 - LEPBI_I2460 - hypothetical protein 2403 40.46 0 2544866..2545300 + 144 183221830 - LEPBI_I2461 - ferric uptake regulation protein 2404 36.72 0 2545330..2545713 - 127 183221831 - LEPBI_I2462 - putative signal peptide 2405 35.90 0 2545814..2546788 + 324 183221832 panE LEPBI_I2463 - 2-dehydropantoate 2-reductase 2406 38.41 0 2546811..2547125 - 104 183221833 - LEPBI_I2464 - hypothetical protein 2407 36.72 0 2547150..2547533 - 127 183221834 - LEPBI_I2465 - putative lipoprotein involved in motility and chitin utilization; putative membrane protein 2408 40.03 0 2547581..2548789 - 402 183221835 - LEPBI_I2466 - putative cAMP-binding protein 2409 37.85 0 2548831..2550225 - 464 183221836 - LEPBI_I2467 - putative type I phosphodiesterase/nucleotide pyrophosphatase 2410 35.90 0 2550240..2551448 - 402 183221837 - LEPBI_I2468 - hypothetical protein 2411 35.57 0 2551439..2552602 - 387 183221838 aroB1 LEPBI_I2469 - 3-dehydroquinate synthase 2412 37.73 0 2552608..2553471 - 287 183221839 - LEPBI_I2470 - hypothetical protein 2413 40.04 0 2553472..2554500 - 342 183221840 - LEPBI_I2471 - putative metallo-dependent hydrolase 2414 36.41 0 2554506..2555318 - 270 183221841 - LEPBI_I2472 - putative signal peptide 2415 40.28 0 2555614..2557455 + 613 183221842 - LEPBI_I2473 - hypothetical protein 2416 34.54 -1 2557463..2558125 - 220 183221843 - LEPBI_I2474 - TetR family transcriptional regulator 2417 37.81 0 2558230..2559234 + 334 183221844 - LEPBI_I2475 - putative alcohol dehydrogenase, zinc-containing 2418 42.94 +1 2559649..2560377 - 242 183221845 - LEPBI_I2477 - putative hemolysin-III related protein; putative membrane protein; putative signal peptide 2419 31.33 -1 2560403..2560552 - 49 183221846 - LEPBI_I2478 - hypothetical protein 2420 35.71 0 2560732..2561109 - 125 183221847 - LEPBI_I2479 - putative signal peptide 2421 40.28 0 2561137..2562891 - 584 183221848 - LEPBI_I2480 - Acyl-CoA dehydrogenase 2422 40.30 0 2562902..2564896 - 664 183221849 fadH LEPBI_I2481 - 2,4-dienoyl-CoA reductase (NADPH) 2423 38.38 0 2565024..2565677 + 217 183221850 - LEPBI_I2482 - TetR family transcriptional regulator 2424 38.61 0 2565682..2566344 - 220 183221851 - LEPBI_Ia2473 - TetR family transcriptional regulator 2425 42.00 0 2566442..2568610 - 722 183221852 - LEPBI_I2485 - putative neutral/alkaline ceramidase; putative signal peptide 2426 38.70 0 2568925..2571030 + 701 183221853 - LEPBI_I2486 - glycoside hydrolase family protein 5 2427 37.67 0 2571194..2572024 - 276 183221854 - LEPBI_I2487 - hypothetical protein 2428 33.33 -1 2572045..2572860 - 271 183221855 - LEPBI_I2488 - putative transcriptional regulator 2429 39.10 0 2573054..2574058 + 334 183221856 - LEPBI_I2489 - hypothetical protein 2430 39.51 0 2574136..2575188 + 350 183221857 - LEPBI_I2490 - putative lipoprotein 2431 37.96 0 2575199..2575912 - 237 183221858 - LEPBI_I2491 - hypothetical protein 2432 37.52 0 2576584..2577372 - 262 183221859 eutC LEPBI_I2492 - ethanolamine ammonia-lyase, light chain (ethanolamine ammonia-lyase small subunit) 2433 40.55 0 2577378..2578763 - 461 183221860 eutB LEPBI_I2493 - ethanolamine ammonia-lyase, heavy chain (ethanolamine ammonia-lyase large subunit) 2434 36.07 0 2578860..2580359 + 499 183221861 - LEPBI_I2494 - putative deoxyribodipyrimidine photo-lyase 2435 43.67 +1 2580556..2582781 + 741 183221862 katG LEPBI_I2495 - peroxidase/catalase 2436 39.15 0 2582782..2583159 + 125 183221863 - LEPBI_I2496 - putative high-potential iron-sulfur protein 2437 34.97 0 2583402..2585417 + 671 183221864 ppc LEPBI_I2497 - phosphoenolpyruvate carboxylase 38.82 MEAN 4.08 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0