version 1.0
Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome I, complete sequence - 1..3599677 3391 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2298 41.51 0 2424273..2425691 - 472 183221725 hslU LEPBI_I2354 - ATPase component of the HslUV protease 2299 44.19 +1 2425693..2426226 - 177 183221726 hslV LEPBI_I2355 - heat shock protein, HslVU, proteasome-related peptidase subunit 2300 37.04 0 2426273..2426704 - 143 183221727 - LEPBI_I2356 - putative kinase 2301 38.28 0 2426704..2427612 - 302 183221728 xerD LEPBI_I2357 - tyrosine recombinase xerD 2302 40.80 0 2427710..2428231 + 173 183221729 - LEPBI_I2358 - hypothetical protein 2303 47.77 +2 2428292..2429233 + 313 183221730 trxB LEPBI_I2359 - thioredoxin reductase 1 2304 39.34 0 2429370..2431133 - 587 183221731 - LEPBI_I2360 - hypothetical protein 2305 42.33 0 2431169..2431657 - 162 183221732 ilvH LEPBI_I2361 - acetolactate synthase small subunit 2306 44.73 +1 2431654..2433381 - 575 183221733 ilvB2 LEPBI_I2362 - acetolactate synthase large subunit 2307 38.78 0 2433460..2434578 + 372 183221734 - LEPBI_I2363 - TPR repeat-containing protein 2308 37.32 0 2434815..2435993 - 392 183221735 - LEPBI_I2364 - major facilitator superfamily permease 2309 39.05 0 2436170..2437849 - 559 183221736 - LEPBI_I2365 - putative signal peptide 2310 39.62 0 2437972..2439069 + 365 183221737 serC LEPBI_I2366 - phosphoserine aminotransferase (psat) 2311 39.75 0 2439062..2439700 + 212 183221738 - LEPBI_I2367 - hypothetical protein 2312 46.35 +1 2439697..2440134 + 145 183221739 rpiB LEPBI_I2368 - ribose-5-phosphate isomerase B (phosphoriboisomerase B) 2313 37.28 0 2440302..2441795 + 497 183221740 - LEPBI_I2369 - hypothetical protein 2314 34.36 -1 2441760..2442149 - 129 183221741 - LEPBI_I2370 - hypothetical protein 2315 38.02 0 2442146..2442337 - 63 183221742 - LEPBI_I2371 - hypothetical protein 2316 34.57 -1 2442337..2442900 - 187 183221743 - LEPBI_I2372 - putative signal peptide 2317 33.48 -1 2442917..2445715 - 932 183221744 - LEPBI_I2373 - hypothetical protein 2318 41.03 0 2445740..2446714 + 324 183221745 - LEPBI_I2374 - hypothetical protein 2319 34.96 0 2446711..2447880 - 389 183221746 - LEPBI_I2375 - hemolysin; putative signal peptide 2320 38.67 0 2447877..2449562 - 561 183221747 - LEPBI_I2376 - putative signal peptide 2321 41.52 0 2449607..2450302 + 231 183221748 - LEPBI_I2377 - putative SAM-dependent methyltransferase 2322 36.76 0 2450345..2451628 + 427 183221749 pcrA2 LEPBI_I2378 - ATP-dependent DNA helicase PcrA 2323 38.49 0 2451792..2452508 + 238 183221750 - LEPBI_I2380 - hypothetical protein 2324 39.23 0 2452534..2453448 + 304 183221751 - LEPBI_I2381 - hypothetical protein 2325 39.89 0 2453491..2454741 + 416 183221752 - LEPBI_I2382 - hypothetical protein 2326 38.16 0 2454731..2456161 + 476 183221753 - LEPBI_I2383 - putative alginate o-acetyltransferase; putative membrane protein 2327 40.37 0 2456298..2456894 - 198 183221754 - LEPBI_I2384 - hypothetical protein 2328 38.17 0 2456943..2458100 - 385 183221755 - LEPBI_I2385 - putative signal peptide 2329 39.26 0 2458097..2458990 - 297 183221756 tyrA LEPBI_I2386 - prephenate dehydrogenase 2330 38.28 0 2458987..2460078 - 363 183221757 pheA LEPBI_I2387 - P-protein 2331 38.03 0 2460071..2460709 - 212 183221758 scpB LEPBI_I2388 - chromosome segregation and condensation protein ScpB 2332 41.26 0 2460716..2461459 - 247 183221759 scpA LEPBI_I2389 - chromosome segregation and condensation protein ScpA 2333 40.22 0 2461463..2461825 - 120 183221760 cheY3 LEPBI_I2390 - chemotaxis protein CheY 2334 42.60 0 2461827..2462894 - 355 183221761 cheB3 LEPBI_I2391 - chemotaxis response regulator protein-glutamate methylesterase 2335 38.90 0 2462891..2466121 - 1076 183221762 cheA3 LEPBI_I2392 - chemotaxis protein CheA 2336 37.50 0 2466140..2466643 - 167 183221763 - LEPBI_I2393 - putative chemotaxis protein CheW-like protein 2337 41.54 0 2466680..2467264 - 194 183221764 - LEPBI_I2394 - putative 5-formyltetrahydrofolate cyclo-ligase 2338 39.94 0 2467261..2467578 - 105 183221765 - LEPBI_I2395 - hypothetical protein 2339 43.86 +1 2467584..2468096 - 170 183221766 - LEPBI_I2396 - hypothetical protein 2340 40.44 0 2468093..2468275 - 60 183221767 - LEPBI_I2397 - hypothetical protein 2341 42.09 0 2468288..2468641 - 117 183221768 rplT LEPBI_I2398 - 50S ribosomal protein L20 2342 39.30 0 2468645..2468845 - 66 183221769 rpmI LEPBI_I2399 - 50S ribosomal protein L35 2343 43.26 +1 2468854..2469417 - 187 183221770 infC LEPBI_I2400 - translation initiation factor IF-3 2344 46.75 +1 2469507..2470430 - 307 183221771 - LEPBI_I2401 - hypothetical protein 2345 42.04 0 2470440..2472356 - 638 183221772 thrS LEPBI_I2402 - threonyl-tRNA synthetase (threonine--tRNA ligase; ThrRS) 2346 39.56 0 2472406..2472999 - 197 183221773 - LEPBI_I2403 - putative transcriptional regulator 2347 37.63 0 2472984..2473775 - 263 183221774 - LEPBI_I2404 - putative alpha/beta hydrolase; putative signal peptide 2348 34.27 -1 2474082..2475782 + 566 183221775 - LEPBI_I2405 - ABC-type transport system, permease and ATPase; putative membrane protein 2349 36.81 0 2475779..2479060 + 1093 183221776 - LEPBI_I2406 - putative cellobiose phosphorylase 2350 35.07 0 2479124..2479468 - 114 183221777 glnK LEPBI_I2407 - nitrogen regulatory protein P-II 2351 42.27 0 2479489..2480898 - 469 183221778 amtB2 LEPBI_I2408 - ammonium transporter 2352 37.36 0 2481168..2482658 + 496 183221779 phr LEPBI_I2409 - deoxyribodipyrimidine photo-lyase 2353 34.74 0 2482655..2482939 + 94 183221780 - LEPBI_I2410 - putative ATP-dependent Clp protease adaptor protein C 2354 34.57 -1 2482936..2483661 + 241 183221781 - LEPBI_I2411 - hypothetical protein 2355 37.42 0 2483658..2485712 - 684 183221782 - LEPBI_I2412 - putative adenylate or guanylate cyclase; putative membrane protein 2356 39.02 0 2485759..2487078 + 439 183221783 - LEPBI_I2413 - putative RNA methyltransferase 2357 39.45 0 2487129..2488256 + 375 183221784 - LEPBI_I2414 - putative signal peptide 2358 39.62 0 2488320..2489162 + 280 183221785 - LEPBI_I2415 - hypothetical protein 2359 35.69 0 2489169..2490401 - 410 183221786 - LEPBI_I2416 - putative adenylate or guanylate cyclase 2360 41.48 0 2490407..2491228 - 273 183221787 hycG LEPBI_I2417 - hydrogenase-4 subunit G 2361 36.48 0 2491225..2492652 - 475 183221788 hycE LEPBI_I2419 - hydrogenase-4 subunit E 2362 32.59 -1 2492649..2493857 - 402 183221789 hyfF LEPBI_I2420 - hydrogenase-4 subunit F 2363 33.66 -1 2493854..2494465 - 203 183221790 hyfE LEPBI_I2421 - hydrogenase-4 subunit E 2364 35.49 0 2494475..2495353 - 292 183221791 hycD LEPBI_I2422 - hydrogenase-4 subunit D 2365 32.82 -1 2495362..2497098 - 578 183221792 hycC LEPBI_I2423 - hydrogenase-4 subunit C; putative membrane protein 2366 35.60 0 2497476..2498180 + 234 183221793 - LEPBI_I2424 - ABC-type transport system, ATP binding protein 2367 30.38 -2 2498177..2500648 + 823 183221794 - LEPBI_I2425 - ABC-type transport system, permease; putative membrane protein 2368 34.78 0 2500687..2501586 + 299 183221795 - LEPBI_I2426 - hypothetical protein 2369 30.94 -1 2501608..2502360 - 250 183221796 - LEPBI_I2427 - hypothetical protein 2370 39.61 0 2502360..2502917 - 185 183221797 pyrE LEPBI_I2428 - orotate phosphoribosyltransferase (oprt; oprtase) 2371 41.70 0 2503338..2504006 + 222 183221798 - LEPBI_I2429 - TetR family transcriptional regulator 2372 39.21 0 2504007..2504993 - 328 183221799 - LEPBI_I2430 - putative di-haem cytochrome C peroxidase (CCP) 2373 38.06 0 2505275..2505634 + 119 183221800 - LEPBI_I2431 - hypothetical protein 2374 38.69 0 2505716..2506648 + 310 183221801 argF LEPBI_I2432 - ornithine carbamoyltransferase (OTCase) 2375 42.15 0 2506765..2507229 - 154 183221802 - LEPBI_I2433 - putative globin 2376 40.00 0 2507321..2507500 + 59 183221803 - LEPBI_I2434 - hypothetical protein 2377 41.19 0 2507491..2508483 + 330 183221804 - LEPBI_I2435 - putative malate synthase-like protein 2378 38.54 0 2508541..2510613 - 690 183221805 - LEPBI_I2436 - putative methyl-accepting chemotaxis protein McpB 2379 39.30 0 2510771..2511943 - 390 183221806 - LEPBI_I2437 - putative signal peptide 2380 39.02 0 2511985..2512635 - 216 183221807 - LEPBI_I2438 - hypothetical protein 2381 38.80 0 2512693..2513955 - 420 183221808 - LEPBI_I2439 - putative voltage-gated chloride channel protein; putative membrane protein; putative signal peptide 2382 37.93 0 2513991..2514164 + 57 183221809 - LEPBI_I2440 - hypothetical protein 2383 32.04 -1 2514225..2514998 - 257 183221810 - LEPBI_I2441 - hypothetical protein 2384 35.19 0 2515069..2517225 - 718 183221811 - LEPBI_I2442 - putative two-component response regulator 2385 37.28 0 2517368..2518813 - 481 183221812 - LEPBI_I2443 - putative apolipoprotein N-acyltransferase; putative membrane protein 2386 34.17 -1 2518810..2519523 - 237 183221813 - LEPBI_I2444 - hypothetical protein 2387 38.25 0 2519737..2520672 - 311 183221814 xerC LEPBI_I2445 - tyrosine recombinase XerC 2388 45.45 +1 2520970..2522133 + 387 183221815 recA LEPBI_I2446 - protein RecA (recombinase A) 2389 36.29 0 2522313..2523362 + 349 183221816 - LEPBI_I2447 - hypothetical protein 2390 37.92 0 2523373..2524200 - 275 183221817 dkgA LEPBI_I2448 - 2,5-diketo-D-gluconic acid reductase A 2391 38.69 0 2524272..2526659 - 795 183221818 clpB LEPBI_I2449 - chaperone ClpB 2392 34.20 -1 2526817..2528784 + 655 183221819 - LEPBI_I2450 - putative serine phosphatase RsbU regulator; putative membrane protein; putative signal peptide 2393 32.55 -1 2528788..2530959 - 723 183221820 - LEPBI_I2451 - putative two-component regulator 2394 32.40 -1 2531003..2532940 - 645 183221821 - LEPBI_I2452 - putative two-component regulator 2395 35.30 0 2532940..2533803 - 287 183221822 - LEPBI_I2453 - hypothetical protein 2396 36.04 0 2533827..2536340 - 837 183221823 - LEPBI_I2454 - putative cation-transporting ATPase; putative membrane protein 2397 35.93 0 2536393..2537742 + 449 183221824 - LEPBI_I2455 - putative peptidase 38.82 MEAN 4.08 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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