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Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome I, complete sequence - 1..3599677 3391 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1884 39.39 0 2016113..2016772 - 219 183221311 ccmB LEPBI_I1928 - cytochrome c-type biogenesis protein CcmB 1885 41.05 0 2016756..2017364 - 202 183221312 ccmA LEPBI_I1929 - ABC-type transport system, heme exporter protein A, ATP binding protein (protein CcmA) 1886 39.05 0 2017340..2018389 + 349 183221313 - LEPBI_I1930 - TPR repeat-containing signal peptide 1887 36.76 0 2018344..2019132 - 262 183221314 - LEPBI_I1931 - ABC-type transport system, ATP binding 1888 39.67 0 2019208..2020107 + 299 183221315 mvaB LEPBI_I1932 - hydroxymethylglutaryl-CoA lyase 1889 33.33 -1 2020097..2020993 + 298 183221316 - LEPBI_I1933 - hypothetical protein 1890 39.53 0 2021221..2022495 - 424 183221317 purA LEPBI_I1934 - adenylosuccinate synthetase 1891 36.96 0 2022503..2023549 - 348 183221318 - LEPBI_I1935 - putative histidyl-tRNA synthetase 1892 41.46 0 2023651..2025669 + 672 183221319 gpsA1 LEPBI_I1936 - glycerol-3-phosphate dehydrogenase [NAD(P)+] (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) 1893 39.48 0 2025659..2027365 - 568 183221320 - LEPBI_I1937 - putative histidine kinase sensor protein 1894 38.15 0 2027592..2028110 - 172 183221321 rplQ LEPBI_I1938 - 50S ribosomal subunit protein L17 1895 39.26 0 2028112..2029089 - 325 183221322 rpoA LEPBI_I1939 - DNA-directed RNA polymerase alpha chain 1896 39.65 0 2029115..2029747 - 210 183221323 rpsD LEPBI_I1940 - 30S ribosomal protein S4 1897 42.51 0 2029757..2030170 - 137 183221324 rpsK LEPBI_I1941 - 30S ribosomal protein S11 1898 43.92 +1 2030182..2030559 - 125 183221325 rpsM LEPBI_I1942 - 30S ribosomal protein S13 1899 42.77 0 2030689..2030847 - 52 183221326 infA LEPBI_I1943 - translation initiation factor IF-1 1900 45.28 +1 2030921..2031481 - 186 183221327 adk LEPBI_I1944 - adenylate kinase 1901 40.94 0 2031485..2032864 - 459 183221328 secY LEPBI_I1945 - preprotein translocase SecY subunit; putative membrane protein 1902 44.94 +1 2032871..2033404 - 177 183221329 - LEPBI_I1946 - 50S ribosomal protein L15 1903 37.22 0 2033409..2033588 - 59 183221330 rpmD LEPBI_I1947 - 50S ribosomal protein L30 1904 43.59 +1 2033603..2034109 - 168 183221331 rpsE LEPBI_I1948 - 30S ribosomal protein S5 1905 44.17 +1 2034110..2034478 - 122 183221332 rplR LEPBI_I1949 - 50S ribosomal protein L18 1906 45.00 +1 2034485..2035024 - 179 183221333 rplF LEPBI_I1950 - 50S ribosomal protein L6 1907 40.85 0 2035039..2035437 - 132 183221334 rpsH LEPBI_I1951 - 30S ribosomal protein S8 1908 42.75 0 2035651..2036202 - 183 183221335 rplE LEPBI_I1952 - 50S ribosomal protein L5 1909 41.67 0 2036205..2036588 - 127 183221336 rplX LEPBI_I1953 - 50S ribosomal protein L24 1910 44.27 +1 2036590..2036982 - 130 183221337 rplN LEPBI_I1954 - 50S ribosomal protein L14 1911 38.52 0 2036979..2037248 - 89 183221338 rpsQ LEPBI_I1955 - 30S ribosomal protein S17 1912 39.93 0 2037252..2037524 - 90 183221339 rpmC LEPBI_I1956 - 50S ribosomal protein L29 1913 43.96 +1 2037521..2037934 - 137 183221340 rplP LEPBI_I1957 - 50S ribosomal protein L16 1914 41.45 0 2037957..2038634 - 225 183221341 rpsC LEPBI_I1958 - 30S ribosomal protein S3 1915 41.53 0 2038638..2038991 - 117 183221342 rplV LEPBI_I1959 - 50S ribosomal protein L22 1916 38.71 0 2038997..2039275 - 92 183221343 rpsS LEPBI_I1960 - 30S ribosomal protein S19 1917 43.49 +1 2039289..2040125 - 278 183221344 rplB LEPBI_I1961 - 50S ribosomal protein L2 1918 39.87 0 2040128..2040433 - 101 183221345 rplW LEPBI_I1962 - 50S ribosomal protein L23 1919 42.14 0 2040438..2041073 - 211 183221346 rplD LEPBI_I1963 - 50S ribosomal protein L4 1920 44.71 +1 2041085..2041708 - 207 183221347 rplC LEPBI_I1964 - 50S ribosomal protein L3 1921 41.75 0 2041720..2042028 - 102 183221348 rpsJ LEPBI_I1965 - 30S ribosomal protein S10 1922 42.70 0 2042033..2043238 - 401 183221349 tuf LEPBI_I1966 - elongation factor Tu (EF-Tu) 1923 44.57 +1 2043288..2045219 - 643 183221350 - LEPBI_I1967 - putative elongation factor G 1924 43.04 +1 2045290..2045763 - 157 183221351 rpsG LEPBI_I1968 - 30S ribosomal protein S7 1925 47.20 +2 2045778..2046152 - 124 183221352 rpsL LEPBI_I1969 - 30S ribosomal protein S12 1926 45.19 +1 2046300..2050601 - 1433 183221353 rpoC LEPBI_I1971 - DNA-directed RNA polymerase beta' chain 1927 44.24 +1 2050616..2054302 - 1228 183221354 rpoB LEPBI_I1972 - DNA-directed RNA polymerase subunit beta 1928 46.35 +1 2054428..2054811 - 127 183221355 rplL LEPBI_I1973 - 50S ribosomal protein L7/L12 1929 43.26 +1 2054847..2055380 - 177 183221356 rplJ LEPBI_I1974 - 50S ribosomal protein L10 1930 44.16 +1 2055393..2056085 - 230 183221357 rplA LEPBI_I1975 - 50S ribosomal protein L1 1931 44.37 +1 2056111..2056536 - 141 183221358 rplK LEPBI_I1976 - 50S ribosomal protein L11 1932 41.26 0 2056576..2057130 - 184 183221359 nusG LEPBI_I1977 - transcription antitermination protein NusG 1933 38.10 0 2057140..2057328 - 62 183221360 secE LEPBI_I1978 - preprotein translocase SecE subunit 1934 41.56 0 2057735..2058427 + 230 183221361 - LEPBI_I1979 - hypothetical protein 1935 46.09 +1 2058501..2059268 + 255 183221362 fabG3a LEPBI_I1980 - 3-oxoacyl-[acyl-carrier-protein] reductase (3-ketoacyl-acyl carrier protein reductase) 1936 36.00 0 2059418..2059717 + 99 183221363 - LEPBI_I1981 - ArsR family transcriptional regulator 1937 39.40 0 2059721..2060692 - 323 183221364 hldD LEPBI_I1982 - ADP-L-glycero-D-manno-heptose-6-epimerase 1938 45.74 +1 2060775..2062547 - 590 183221365 - LEPBI_I1983 - putative 3-octaprenyl-4-hydroxybenzoate carboxy-lyase family protein 1939 39.61 0 2062601..2064145 + 514 183221366 - LEPBI_I1984 - hypothetical protein 1940 32.79 -1 2064171..2065643 - 490 183221367 - LEPBI_I1985 - putative acyltransferase; putative membrane protein 1941 32.39 -1 2065753..2067345 + 530 183221368 - LEPBI_I1986 - hypothetical protein 1942 28.50 -2 2067351..2068859 + 502 183221369 - LEPBI_I1987 - putative signal peptide 1943 31.37 -1 2068922..2069074 - 50 183221370 - LEPBI_I1988 - hypothetical protein 1944 30.10 -2 2069147..2070508 - 453 183221371 - LEPBI_I1989 - hypothetical protein 1945 32.51 -1 2070546..2070788 - 80 183221372 - LEPBI_I1990 - hypothetical protein 1946 38.79 0 2070832..2071821 - 329 183221373 - LEPBI_I1991 - putative glycosyltransferase 1947 31.70 -1 2071920..2073323 - 467 183221374 - LEPBI_I1992 - hypothetical protein 1948 31.58 -1 2073320..2074855 - 511 183221375 - LEPBI_I1993 - hypothetical protein 1949 34.65 -1 2074858..2075997 - 379 183221376 - LEPBI_I1994 - putative glycosyltransferase 1950 30.10 -2 2075994..2077940 - 648 183221377 - LEPBI_I1995 - hypothetical protein 1951 37.13 0 2077945..2078655 - 236 183221378 - LEPBI_I1996 - putative glycosyltransferase 1952 36.73 0 2078810..2079574 - 254 183221379 - LEPBI_I1997 - putative glycosyltransferase 1953 36.89 0 2079629..2080753 - 374 183221380 glf LEPBI_I1998 - UDP-galactopyranose mutase 1954 33.33 -1 2080750..2081679 - 309 183221381 - LEPBI_I1999 - hypothetical protein 1955 32.68 -1 2081669..2082889 - 406 183221382 - LEPBI_Ia1994 - putative glycosyl transferase, group 1 1956 35.20 0 2082873..2084102 - 409 183221383 - LEPBI_I2001 - putative glycosyltransferase 1957 32.02 -1 2084161..2084388 - 75 183221384 - LEPBI_I2002 - hypothetical protein 1958 34.76 0 2084396..2085307 - 303 183221385 - LEPBI_I2003 - putative glycosyltransferase 1959 31.39 -1 2085314..2086597 - 427 183221386 - LEPBI_I2004 - hypothetical protein 1960 37.18 0 2086594..2087580 - 328 183221387 serA1 LEPBI_I2005 - D-3-phosphoglycerate dehydrogenase (PGDH) 1961 31.22 -1 2087622..2088662 - 346 183221388 - LEPBI_I2006 - putative alginate biosynthesis protein AlgJ precursor 1962 32.24 -1 2088662..2089117 - 151 183221389 - LEPBI_I2007 - hypothetical protein 1963 32.19 -1 2089159..2090034 - 291 183221390 - LEPBI_I2008 - putative poly(beta-D-mannuronate) O-acetylase (alginate biosynthesis protein AlgI) 1964 31.26 -1 2090093..2091058 - 321 183221391 - LEPBI_I2009 - putative glycosyltransferase 1965 31.44 -1 2091045..2092256 - 403 183221392 - LEPBI_I2010 - putative glycosyltransferase 1966 32.64 -1 2092263..2093696 - 477 183221393 - LEPBI_I2011 - hypothetical protein 1967 34.14 -1 2093700..2094812 - 370 183221394 - LEPBI_I2012 - putative pyridoxal-phosphate-dependent aminotransferase 1968 33.10 -1 2094805..2095239 - 144 183221395 - LEPBI_I2013 - hypothetical protein 1969 31.75 -1 2095248..2095940 - 230 183221396 - LEPBI_I2014 - hypothetical protein 1970 33.39 -1 2095937..2097649 - 570 183221397 - LEPBI_I2015 - hypothetical protein 1971 31.86 -1 2097688..2098365 - 225 183221398 - LEPBI_I2016 - putative SAM-dependent methyltransferase 1972 36.46 0 2098393..2099673 - 426 183221399 - LEPBI_I2017 - ABC-type transport system, ATP binding protein 1973 31.62 -1 2099705..2100580 - 291 183221400 - LEPBI_I2018 - ABC-type transport system, permease component 1974 34.74 0 2100658..2101653 - 331 183221401 - LEPBI_I2019 - putative transferase 1975 34.26 -1 2101650..2102726 - 358 183221402 - LEPBI_I2020 - hypothetical protein 1976 34.76 0 2102740..2104491 - 583 183221403 - LEPBI_I2021 - hypothetical protein 1977 33.70 -1 2104557..2105102 - 181 183221404 - LEPBI_I2022 - putative acetyltransferase 1978 33.23 -1 2105099..2106103 - 334 183221405 - LEPBI_I2023 - hypothetical protein 1979 35.61 0 2106100..2107374 - 424 183221406 - LEPBI_I2024 - putative aminotransferase 1980 34.04 -1 2107375..2108367 - 330 183221407 - LEPBI_I2025 - hypothetical protein 1981 35.07 0 2108364..2109113 - 249 183221408 - LEPBI_I2026 - putative acylneuraminate cytidylyltransferase 1982 39.06 0 2109117..2110163 - 348 183221409 - LEPBI_I2027 - N-acetylneuraminic acid (Neu5Ac) synthase NeuB family 1983 38.91 0 2110160..2110840 - 226 183221410 - LEPBI_I2028 - putative methionyl-tRNA formyltransferase 38.82 MEAN 4.08 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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