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Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome I, complete sequence - 1..3599677 3391 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1823 43.73 +1 1956772..1957560 + 262 183221250 - LEPBI_I1866 - ABC-type transport system, ATP-binding protein; putative resistance to organic solvant 1824 44.83 +1 1957593..1958366 + 257 183221251 - LEPBI_I1867 - putative ABC transporter 1825 47.85 +2 1958545..1959453 + 302 183221252 lpxC LEPBI_I1868 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (UDP-3-O-acyl-GlcNAc deacetylase) 1826 42.13 0 1959516..1961243 + 575 183221253 ptsI LEPBI_I1869 - phosphoenolpyruvate-protein phosphotransferase (phosphotransferase system, enzyme I) 1827 41.44 0 1961265..1962596 - 443 183221254 - LEPBI_I1870 - major facilitator superfamily permease 1828 42.76 0 1962638..1963210 - 190 183221255 - LEPBI_I1871 - putative cobalamin adenosyltransferase 1829 42.22 0 1963407..1964261 + 284 183221256 flaB4 LEPBI_I1872 - flagellar filament 35 kDa core protein (flagellin class B; 35 kDa antigen) 1830 41.42 0 1964275..1965090 + 271 183221257 - LEPBI_I1873 - OmpA domain-containing protein 1831 39.88 0 1965196..1965516 - 106 183221258 - LEPBI_I1874 - hypothetical protein 1832 37.61 0 1965579..1966958 + 459 183221259 - LEPBI_I1875 - putative cyclic-nucleotide-gated cation channel; putative membrane protein 1833 39.79 0 1966976..1967749 - 257 183221260 - LEPBI_I1876 - putative ParA family protein 1834 32.57 -1 1967833..1968225 + 130 183221261 - LEPBI_I1877 - hypothetical protein 1835 34.21 -1 1968222..1969703 + 493 183221262 - LEPBI_I1878 - hypothetical protein 1836 38.77 0 1969736..1971610 + 624 183221263 - LEPBI_I1879 - long-chain acyl-CoA synthetase, AMP-forming 1837 38.33 0 1971607..1974186 - 859 183221264 pepN1 LEPBI_I1880 - aminopeptidase N 1838 38.15 0 1974228..1974497 - 89 183221265 rbpA2 LEPBI_I1881 - RNA binding protein 1839 38.78 0 1974642..1976312 + 556 183221266 - LEPBI_I1882 - putative two-component response regulator 1840 42.11 0 1976301..1978772 - 823 183221267 fecA LEPBI_I1883 - Iron(III) dicitrate TonB-dependent receptor; putative signal peptide 1841 37.16 0 1978848..1979945 + 365 183221268 - LEPBI_I1885 - hypothetical protein 1842 38.82 0 1980010..1980264 - 84 183221269 - LEPBI_I1886 - hypothetical protein 1843 40.70 0 1980395..1981846 + 483 183221270 - LEPBI_I1887 - putative amino acid permease 1844 38.78 0 1981874..1982497 - 207 183221271 - LEPBI_I1888 - hypothetical protein 1845 38.33 0 1982509..1982748 + 79 183221272 - LEPBI_I1889 - hypothetical protein 1846 39.43 0 1982799..1983881 + 360 183221273 - LEPBI_I1890 - hypothetical protein 1847 36.53 0 1983876..1984313 - 145 183221274 - LEPBI_I1891 - hypothetical protein 1848 39.77 0 1984383..1985267 + 294 183221275 - LEPBI_I1892 - alpha/beta family hydrolase 1849 39.12 0 1985336..1985767 + 143 183221276 - LEPBI_I1893 - hypothetical protein 1850 27.75 -2 1985878..1986897 - 339 183221277 - LEPBI_I1894 - hypothetical protein 1851 41.86 0 1987505..1988782 + 425 183221278 - LEPBI_I1895 - hypothetical protein 1852 36.46 0 1988875..1989513 + 212 183221279 - LEPBI_I1896 - putative signal peptide 1853 42.24 0 1989515..1991008 + 497 183221280 lysS LEPBI_I1897 - lysyl-tRNA synthetase (lysine--tRNA ligase; LysRS) 1854 38.98 0 1991169..1991717 - 182 183221281 - LEPBI_I1898 - hypothetical protein 1855 40.28 0 1991775..1992998 + 407 183221282 serA2 LEPBI_I1899 - D-3-phosphoglycerate dehydrogenase (PGDH) 1856 40.67 0 1993023..1993799 + 258 183221283 - LEPBI_I1900 - putative hydroxyacylglutathione hydrolase 1857 39.95 0 1993845..1994237 + 130 183221284 - LEPBI_I1901 - putative signal peptide 1858 42.38 0 1994246..1995019 + 257 183221285 endA LEPBI_I1902 - endonuclease I; putative signal peptide 1859 42.93 +1 1995133..1996518 + 461 183221286 lpdA2 LEPBI_I1903 - dihydrolipoyl dehydrogenase (E3 component of pyruvate and 2-oxoglutarate dehydrogenases complexes; dihydrolipoamide dehydrogenase) 1860 38.08 0 1996515..1997546 + 343 183221287 - LEPBI_I1904 - hypothetical protein 1861 38.56 0 1997547..1998464 + 305 183221288 - LEPBI_I1905 - ABC-type transport system, ATP binding protein 1862 35.02 0 1998467..1999237 + 256 183221289 - LEPBI_I1906 - ABC-type transport system, permease 1863 43.14 +1 1999257..1999511 + 84 183221290 - LEPBI_I1907 - putative BolA-like protein 1864 38.24 0 1999517..2000188 + 223 183221291 - LEPBI_I1908 - putative glutathione S-transferase protein 1865 38.67 0 2000190..2000414 + 74 183221292 - LEPBI_I1909 - putative BolA-like protein 1866 38.83 0 2000417..2000725 + 102 183221293 - LEPBI_I1910 - putative glutaredoxin-related protein 1867 43.62 +1 2000730..2000972 + 80 183221294 - LEPBI_I1911 - putative glutathione S-transferase 1868 40.08 0 2001133..2002140 - 335 183221295 gshB LEPBI_I1912 - glutathione synthase 1869 36.27 0 2002142..2003743 - 533 183221296 gshA LEPBI_I1913 - glutamate--cysteine ligase (gamma-glutamylcysteine synthetase; gamma-ECS) (GCS) 1870 42.53 0 2003747..2005519 - 590 183221297 ggtA LEPBI_I1914 - gamma-glutamyltranspeptidase (gamma-glutamyltransferase large chain; gamma-glutamyltransferase small) chain 1871 45.06 +1 2005516..2005839 - 107 183221298 - LEPBI_I1915 - putative metal-sulfur cluster biosynthetic enzyme 1872 34.67 -1 2005836..2006135 - 99 183221299 - LEPBI_I1916 - NifU-like domain-containing protein 1873 40.64 0 2006245..2007489 - 414 183221300 sufS LEPBI_I1917 - cysteine desulfurase 1874 40.25 0 2007486..2007803 - 105 183221301 - LEPBI_I1918 - reductase/dioxygenase 1875 38.14 0 2007800..2008963 - 387 183221302 - LEPBI_I1919 - hypothetical protein 1876 42.50 0 2008960..2009712 - 250 183221303 sufC LEPBI_I1920 - ABC-type transport system associated with Fe-S cluster assembly, ATPase 1877 43.26 +1 2009804..2011042 - 412 183221304 - LEPBI_I1921 - putative diguanylate phosphodiesterase 1878 43.22 +1 2011160..2012443 - 427 183221305 glgC LEPBI_I1922 - glucose-1-phosphate adenylyltransferase small subunit 1879 41.82 0 2012498..2013145 - 215 183221306 purQ LEPBI_I1923 - phosphoribosylformylglycinamidine synthase I (FGAM synthase I) 1880 40.16 0 2013142..2013390 - 82 183221307 purS LEPBI_I1924 - phosphorybosylformylglycinamidine synthase PurS component 1881 41.49 0 2013372..2014229 - 285 183221308 purC LEPBI_I1925 - phosphoribosylaminoimidazole-succinocarboxamide synthase (SAICAR synthetase) 1882 38.21 0 2014226..2015353 - 375 183221309 - LEPBI_I1926 - putative two-component regulator 1883 39.48 0 2015360..2016058 - 232 183221310 ccmC LEPBI_I1927 - cytochrome c-type biogenesis protein CcmC 1884 39.39 0 2016113..2016772 - 219 183221311 ccmB LEPBI_I1928 - cytochrome c-type biogenesis protein CcmB 1885 41.05 0 2016756..2017364 - 202 183221312 ccmA LEPBI_I1929 - ABC-type transport system, heme exporter protein A, ATP binding protein (protein CcmA) 1886 39.05 0 2017340..2018389 + 349 183221313 - LEPBI_I1930 - TPR repeat-containing signal peptide 1887 36.76 0 2018344..2019132 - 262 183221314 - LEPBI_I1931 - ABC-type transport system, ATP binding 1888 39.67 0 2019208..2020107 + 299 183221315 mvaB LEPBI_I1932 - hydroxymethylglutaryl-CoA lyase 1889 33.33 -1 2020097..2020993 + 298 183221316 - LEPBI_I1933 - hypothetical protein 1890 39.53 0 2021221..2022495 - 424 183221317 purA LEPBI_I1934 - adenylosuccinate synthetase 1891 36.96 0 2022503..2023549 - 348 183221318 - LEPBI_I1935 - putative histidyl-tRNA synthetase 1892 41.46 0 2023651..2025669 + 672 183221319 gpsA1 LEPBI_I1936 - glycerol-3-phosphate dehydrogenase [NAD(P)+] (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) 1893 39.48 0 2025659..2027365 - 568 183221320 - LEPBI_I1937 - putative histidine kinase sensor protein 1894 38.15 0 2027592..2028110 - 172 183221321 rplQ LEPBI_I1938 - 50S ribosomal subunit protein L17 1895 39.26 0 2028112..2029089 - 325 183221322 rpoA LEPBI_I1939 - DNA-directed RNA polymerase alpha chain 1896 39.65 0 2029115..2029747 - 210 183221323 rpsD LEPBI_I1940 - 30S ribosomal protein S4 1897 42.51 0 2029757..2030170 - 137 183221324 rpsK LEPBI_I1941 - 30S ribosomal protein S11 1898 43.92 +1 2030182..2030559 - 125 183221325 rpsM LEPBI_I1942 - 30S ribosomal protein S13 1899 42.77 0 2030689..2030847 - 52 183221326 infA LEPBI_I1943 - translation initiation factor IF-1 1900 45.28 +1 2030921..2031481 - 186 183221327 adk LEPBI_I1944 - adenylate kinase 1901 40.94 0 2031485..2032864 - 459 183221328 secY LEPBI_I1945 - preprotein translocase SecY subunit; putative membrane protein 1902 44.94 +1 2032871..2033404 - 177 183221329 - LEPBI_I1946 - 50S ribosomal protein L15 1903 37.22 0 2033409..2033588 - 59 183221330 rpmD LEPBI_I1947 - 50S ribosomal protein L30 1904 43.59 +1 2033603..2034109 - 168 183221331 rpsE LEPBI_I1948 - 30S ribosomal protein S5 1905 44.17 +1 2034110..2034478 - 122 183221332 rplR LEPBI_I1949 - 50S ribosomal protein L18 1906 45.00 +1 2034485..2035024 - 179 183221333 rplF LEPBI_I1950 - 50S ribosomal protein L6 1907 40.85 0 2035039..2035437 - 132 183221334 rpsH LEPBI_I1951 - 30S ribosomal protein S8 1908 42.75 0 2035651..2036202 - 183 183221335 rplE LEPBI_I1952 - 50S ribosomal protein L5 1909 41.67 0 2036205..2036588 - 127 183221336 rplX LEPBI_I1953 - 50S ribosomal protein L24 1910 44.27 +1 2036590..2036982 - 130 183221337 rplN LEPBI_I1954 - 50S ribosomal protein L14 1911 38.52 0 2036979..2037248 - 89 183221338 rpsQ LEPBI_I1955 - 30S ribosomal protein S17 1912 39.93 0 2037252..2037524 - 90 183221339 rpmC LEPBI_I1956 - 50S ribosomal protein L29 1913 43.96 +1 2037521..2037934 - 137 183221340 rplP LEPBI_I1957 - 50S ribosomal protein L16 1914 41.45 0 2037957..2038634 - 225 183221341 rpsC LEPBI_I1958 - 30S ribosomal protein S3 1915 41.53 0 2038638..2038991 - 117 183221342 rplV LEPBI_I1959 - 50S ribosomal protein L22 1916 38.71 0 2038997..2039275 - 92 183221343 rpsS LEPBI_I1960 - 30S ribosomal protein S19 1917 43.49 +1 2039289..2040125 - 278 183221344 rplB LEPBI_I1961 - 50S ribosomal protein L2 1918 39.87 0 2040128..2040433 - 101 183221345 rplW LEPBI_I1962 - 50S ribosomal protein L23 1919 42.14 0 2040438..2041073 - 211 183221346 rplD LEPBI_I1963 - 50S ribosomal protein L4 1920 44.71 +1 2041085..2041708 - 207 183221347 rplC LEPBI_I1964 - 50S ribosomal protein L3 1921 41.75 0 2041720..2042028 - 102 183221348 rpsJ LEPBI_I1965 - 30S ribosomal protein S10 1922 42.70 0 2042033..2043238 - 401 183221349 tuf LEPBI_I1966 - elongation factor Tu (EF-Tu) 38.82 MEAN 4.08 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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