version 1.0
Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome I, complete sequence - 1..3599677 3391 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1762 39.74 0 1882033..1882953 + 306 183221189 - LEPBI_I1803 - hypothetical protein 1763 37.00 0 1882950..1883876 + 308 183221190 - LEPBI_I1804 - hypothetical protein 1764 32.55 -1 1883877..1885790 + 637 183221191 - LEPBI_I1805 - hypothetical protein 1765 40.63 0 1885791..1887380 - 529 183221192 prfC LEPBI_I1806 - peptide chain release factor 3 1766 36.18 0 1887509..1889542 + 677 183221193 - LEPBI_I1807 - hypothetical protein 1767 32.98 -1 1889568..1891535 + 655 183221194 - LEPBI_I1808 - hypothetical protein 1768 34.90 0 1891501..1892076 - 191 183221195 - LEPBI_I1809 - hypothetical protein 1769 34.23 -1 1892152..1892595 + 147 183221196 - LEPBI_I1810 - hypothetical protein 1770 37.94 0 1892557..1893012 - 151 183221197 mgsA LEPBI_I1811 - methylglyoxal synthase (MGS) 1771 38.33 0 1893063..1893863 + 266 183221198 - LEPBI_I1812 - putative signal peptide 1772 38.15 0 1893866..1894696 - 276 183221199 - LEPBI_I1813 - hypothetical protein 1773 38.54 0 1894767..1896359 - 530 183221200 - LEPBI_I1814 - putative permease; putative membrane protein 1774 37.84 0 1896352..1897728 - 458 183221201 - LEPBI_I1815 - putative tRNA-i(6)A37 modification enzyme MiaB 1775 38.72 0 1897791..1898384 + 197 183221202 - LEPBI_I1816 - putative chaperone protein DnaJ 1776 34.22 -1 1898381..1899511 - 376 183221203 - LEPBI_I1817 - hypothetical protein 1777 34.67 -1 1899513..1900937 - 474 183221204 - LEPBI_I1818 - putative poly(beta-D-mannuronate) O-acetylase (alginate biosynthesis protein AlgI); putative membrane protein; putative signal peptide 1778 35.36 0 1900963..1902144 - 393 183221205 - LEPBI_I1819 - hypothetical protein 1779 34.97 0 1902406..1904727 + 773 183221206 - LEPBI_I1820 - putative signal peptide 1780 35.48 0 1904702..1905541 - 279 183221207 uppP LEPBI_I1821 - undecaprenyl-diphosphatase 1781 35.99 0 1905548..1906225 - 225 183221208 lipL31 LEPBI_I1822 - LipL31; putative signal peptide 1782 37.89 0 1906326..1909748 - 1140 183221209 mfd LEPBI_I1823 - transcription-repair coupling factor 1783 37.56 0 1909758..1910609 - 283 183221210 panC LEPBI_I1824 - pantoate--beta-alanine ligase 1784 43.54 +1 1910606..1911898 - 430 183221211 hisD LEPBI_I1825 - histidinol dehydrogenase 1785 40.95 0 1911942..1913018 - 358 183221212 - LEPBI_I1826 - hypothetical protein 1786 37.01 0 1913113..1915236 - 707 183221213 - LEPBI_I1827 - hypothetical protein 1787 40.16 0 1915244..1918069 - 941 183221214 - LEPBI_I1828 - putative adenylate cyclase 1788 41.12 0 1918120..1918890 + 256 183221215 exoA LEPBI_I1829 - exodeoxyribonuclease 1789 37.86 0 1918924..1919895 + 323 183221216 - LEPBI_I1830 - hypothetical protein 1790 42.77 0 1919950..1920585 - 211 183221217 - LEPBI_I1831 - putative lipoprotein; putative signal peptide 1791 42.02 0 1920649..1922052 - 467 183221218 - LEPBI_I1832 - putative divalent cation transporter; putative MgtE transporter; putative membrane protein 1792 40.26 0 1922118..1922810 + 230 183221219 - LEPBI_I1833 - hypothetical protein 1793 38.03 0 1922797..1923861 + 354 183221220 - LEPBI_I1834 - hypothetical protein 1794 40.57 0 1923854..1924834 + 326 183221221 - LEPBI_I1835 - putative cation efflux system protein; putative membrane protein; putative signal peptide 1795 41.03 0 1924843..1925895 - 350 183221222 - LEPBI_I1836 - putative acyl-CoA dehydrogenase 1796 43.14 +1 1925901..1928765 - 954 183221223 uvrA LEPBI_I1837 - excinuclease ABC subunit A 1797 39.45 0 1928834..1930468 + 544 183221224 - LEPBI_I1838 - S49 family peptidase 1798 42.63 0 1930618..1931574 - 318 183221225 - LEPBI_I1839 - putative translation factor SUA5 1799 42.69 0 1931636..1933216 - 526 183221226 - LEPBI_I1840 - putative glycosidase 1800 42.62 0 1933362..1934072 + 236 183221227 - LEPBI_I1841 - hypothetical protein 1801 43.53 +1 1934077..1934841 + 254 183221228 ugpQ LEPBI_I1842 - glycerophosphoryl diester phosphodiesterase (glycerophosphodiester phosphodiesterase) 1802 42.92 +1 1934826..1935065 - 79 183221229 - LEPBI_I1843 - hypothetical protein 1803 39.87 0 1935201..1936592 + 463 183221230 - LEPBI_I1844 - hypothetical protein 1804 47.64 +2 1936625..1938127 + 500 183221231 leuA LEPBI_I1845 - 2-isopropylmalate synthase (Alpha-isopropylmalate synthase; Alpha-IPM synthetase) 1805 41.19 0 1938131..1939225 + 364 183221232 hisC LEPBI_I1846 - histidinol-phosphate aminotransferase (imidazole acetol-phosphate transaminase) 1806 37.04 0 1939332..1939736 - 134 183221233 - LEPBI_I1848 - Hsp20 family heat-shock protein 1807 40.77 0 1939745..1940188 - 147 183221234 - LEPBI_I1849 - heat shock protein IbpB 1808 44.73 +1 1940336..1940800 + 154 183221235 - LEPBI_I1850 - hypothetical protein 1809 31.52 -1 1940797..1941348 + 183 183221236 - LEPBI_I1851 - hypothetical protein 1810 40.51 0 1941403..1943673 - 756 183221237 clpA LEPBI_I1852 - ATP-dependent Clp protease ATP-binding subunit ClpA 1811 35.96 0 1943670..1944011 - 113 183221238 clpS LEPBI_I1853 - ATP-dependent Clp protease adaptor protein Clp 1812 39.52 0 1944011..1945174 - 387 183221239 - LEPBI_I1854 - hypothetical protein 1813 37.63 0 1945178..1948339 - 1053 183221240 - LEPBI_I1855 - putative histidine kinase sensor protein; putative membrane protein 1814 38.47 0 1948367..1949008 - 213 183221241 - LEPBI_I1856 - hypothetical protein 1815 37.64 0 1949088..1949528 + 146 183221242 - LEPBI_I1858 - hypothetical protein 1816 35.32 0 1949531..1950640 + 369 183221243 - LEPBI_I1859 - putative signal peptide 1817 41.59 0 1950641..1951936 + 431 183221244 xseA LEPBI_I1860 - exodeoxyribonuclease VII large subunit (exonuclease VII large subunit) 1818 35.87 0 1951926..1952201 + 91 183221245 xseB LEPBI_I1861 - exodeoxyribonuclease VII small subunit (exonuclease VII small subunit) 1819 40.96 0 1952205..1953515 + 436 183221246 - LEPBI_I1862 - sodium:solute symporter family protein 1820 42.29 0 1953484..1954533 - 349 183221247 ddlB LEPBI_I1863 - D-alanine--D-alanine ligase B (D-alanylalanine synthetase B; D-Ala-D-Ala ligase B) 1821 37.38 0 1954581..1955990 + 469 183221248 - LEPBI_I1864 - putative signal PEP)tide 1822 45.30 +1 1955987..1956763 + 258 183221249 - LEPBI_I1865 - ABC-type transport system, permease; putative resistance to organic solvant; putative membrane protein 1823 43.73 +1 1956772..1957560 + 262 183221250 - LEPBI_I1866 - ABC-type transport system, ATP-binding protein; putative resistance to organic solvant 1824 44.83 +1 1957593..1958366 + 257 183221251 - LEPBI_I1867 - putative ABC transporter 1825 47.85 +2 1958545..1959453 + 302 183221252 lpxC LEPBI_I1868 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (UDP-3-O-acyl-GlcNAc deacetylase) 1826 42.13 0 1959516..1961243 + 575 183221253 ptsI LEPBI_I1869 - phosphoenolpyruvate-protein phosphotransferase (phosphotransferase system, enzyme I) 1827 41.44 0 1961265..1962596 - 443 183221254 - LEPBI_I1870 - major facilitator superfamily permease 1828 42.76 0 1962638..1963210 - 190 183221255 - LEPBI_I1871 - putative cobalamin adenosyltransferase 1829 42.22 0 1963407..1964261 + 284 183221256 flaB4 LEPBI_I1872 - flagellar filament 35 kDa core protein (flagellin class B; 35 kDa antigen) 1830 41.42 0 1964275..1965090 + 271 183221257 - LEPBI_I1873 - OmpA domain-containing protein 1831 39.88 0 1965196..1965516 - 106 183221258 - LEPBI_I1874 - hypothetical protein 1832 37.61 0 1965579..1966958 + 459 183221259 - LEPBI_I1875 - putative cyclic-nucleotide-gated cation channel; putative membrane protein 1833 39.79 0 1966976..1967749 - 257 183221260 - LEPBI_I1876 - putative ParA family protein 1834 32.57 -1 1967833..1968225 + 130 183221261 - LEPBI_I1877 - hypothetical protein 1835 34.21 -1 1968222..1969703 + 493 183221262 - LEPBI_I1878 - hypothetical protein 1836 38.77 0 1969736..1971610 + 624 183221263 - LEPBI_I1879 - long-chain acyl-CoA synthetase, AMP-forming 1837 38.33 0 1971607..1974186 - 859 183221264 pepN1 LEPBI_I1880 - aminopeptidase N 1838 38.15 0 1974228..1974497 - 89 183221265 rbpA2 LEPBI_I1881 - RNA binding protein 1839 38.78 0 1974642..1976312 + 556 183221266 - LEPBI_I1882 - putative two-component response regulator 1840 42.11 0 1976301..1978772 - 823 183221267 fecA LEPBI_I1883 - Iron(III) dicitrate TonB-dependent receptor; putative signal peptide 1841 37.16 0 1978848..1979945 + 365 183221268 - LEPBI_I1885 - hypothetical protein 1842 38.82 0 1980010..1980264 - 84 183221269 - LEPBI_I1886 - hypothetical protein 1843 40.70 0 1980395..1981846 + 483 183221270 - LEPBI_I1887 - putative amino acid permease 1844 38.78 0 1981874..1982497 - 207 183221271 - LEPBI_I1888 - hypothetical protein 1845 38.33 0 1982509..1982748 + 79 183221272 - LEPBI_I1889 - hypothetical protein 1846 39.43 0 1982799..1983881 + 360 183221273 - LEPBI_I1890 - hypothetical protein 1847 36.53 0 1983876..1984313 - 145 183221274 - LEPBI_I1891 - hypothetical protein 1848 39.77 0 1984383..1985267 + 294 183221275 - LEPBI_I1892 - alpha/beta family hydrolase 1849 39.12 0 1985336..1985767 + 143 183221276 - LEPBI_I1893 - hypothetical protein 1850 27.75 -2 1985878..1986897 - 339 183221277 - LEPBI_I1894 - hypothetical protein 1851 41.86 0 1987505..1988782 + 425 183221278 - LEPBI_I1895 - hypothetical protein 1852 36.46 0 1988875..1989513 + 212 183221279 - LEPBI_I1896 - putative signal peptide 1853 42.24 0 1989515..1991008 + 497 183221280 lysS LEPBI_I1897 - lysyl-tRNA synthetase (lysine--tRNA ligase; LysRS) 1854 38.98 0 1991169..1991717 - 182 183221281 - LEPBI_I1898 - hypothetical protein 1855 40.28 0 1991775..1992998 + 407 183221282 serA2 LEPBI_I1899 - D-3-phosphoglycerate dehydrogenase (PGDH) 1856 40.67 0 1993023..1993799 + 258 183221283 - LEPBI_I1900 - putative hydroxyacylglutathione hydrolase 1857 39.95 0 1993845..1994237 + 130 183221284 - LEPBI_I1901 - putative signal peptide 1858 42.38 0 1994246..1995019 + 257 183221285 endA LEPBI_I1902 - endonuclease I; putative signal peptide 1859 42.93 +1 1995133..1996518 + 461 183221286 lpdA2 LEPBI_I1903 - dihydrolipoyl dehydrogenase (E3 component of pyruvate and 2-oxoglutarate dehydrogenases complexes; dihydrolipoamide dehydrogenase) 1860 38.08 0 1996515..1997546 + 343 183221287 - LEPBI_I1904 - hypothetical protein 1861 38.56 0 1997547..1998464 + 305 183221288 - LEPBI_I1905 - ABC-type transport system, ATP binding protein 38.82 MEAN 4.08 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0