version 1.0
Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome I, complete sequence - 1..3599677 3391 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1600 40.88 0 1715068..1717002 + 644 183221027 - LEPBI_I1640 - putative long-chain-fatty-acid CoA ligase 1601 35.71 0 1717089..1717760 + 223 183221028 - LEPBI_I1641 - hypothetical protein 1602 36.78 0 1717744..1718352 - 202 183221029 - LEPBI_I1642 - putative ATP-dependent protease La 1603 40.88 0 1718407..1719426 + 339 183221030 - LEPBI_I1643 - carbohydrate kinase subunit RfaE 1604 39.06 0 1719423..1719911 + 162 183221031 - LEPBI_I1644 - nucleotidyltransferase RfaE domain-containing protein 1605 39.19 0 1719975..1721597 + 540 183221032 pyrG LEPBI_I1645 - CTP synthase (UTP--ammonia ligase; CTP synthetase) 1606 42.08 0 1721599..1722444 + 281 183221033 kdsA LEPBI_I1646 - 2-dehydro-3-deoxyphosphooctonate aldolase 1607 37.52 0 1722478..1723002 + 174 183221034 - LEPBI_I1647 - hypothetical protein 1608 35.65 0 1722999..1724336 + 445 183221035 - LEPBI_I1648 - putative signal peptide 1609 38.77 0 1724395..1725093 + 232 183221036 - LEPBI_I1649 - ABC-type transport system, ATPase 1610 37.62 0 1725094..1726515 + 473 183221037 rpoN LEPBI_I1650 - RNA polymerase sigma-54 factor 1611 40.45 0 1726519..1727487 + 322 183221038 hprK LEPBI_I1651 - HPr kinase/phosphorylase (HPrK/P; HPr(Ser) kinase/phosphorylase) 1612 39.86 0 1727462..1727737 + 91 183221039 ptsH LEPBI_I1652 - phosphocarrier protein HPr (histidine-containing protein) 1613 35.09 0 1727727..1729550 + 607 183221040 - LEPBI_I1653 - histidine kinase sensor protein; putative membrane protein 1614 37.69 0 1729550..1730902 + 450 183221041 - LEPBI_I1654 - putative nitrogen assimilation regulatory protein NtrX 1615 35.41 0 1730904..1731722 + 272 183221042 - LEPBI_I1655 - hypothetical protein 1616 40.96 0 1731724..1733676 + 650 183221043 priA LEPBI_I1656 - primosomal protein N' (replication factor Y) 1617 46.03 +1 1733686..1734654 + 322 183221044 fmt LEPBI_I1657 - methionyl-tRNA formyltransferase 1618 40.20 0 1734651..1735670 + 339 183221045 - LEPBI_I1658 - putative signal peptide 1619 46.30 +1 1735672..1736334 + 220 183221046 rpe LEPBI_I1659 - ribulose-5-phosphate 3-epimerase 1620 41.42 0 1736331..1736639 + 102 183221047 rpsP LEPBI_I1660 - 30S ribosomal protein S16 1621 46.75 +1 1736647..1736877 + 76 183221048 - LEPBI_I1661 - RNA-binding protein 1622 44.38 +1 1736888..1737403 + 171 183221049 rimM LEPBI_I1662 - putative 16S rRNA processing protein RimM 1623 46.02 +1 1737393..1738046 + 217 183221050 trmD LEPBI_I1663 - tRNA (guanine-N(1)-)-methyltransferase 1624 41.96 0 1738055..1738483 + 142 183221051 rplS LEPBI_I1664 - 50S ribosomal protein L19 1625 43.87 +1 1738756..1739220 + 154 183221052 - LEPBI_I1665 - putative ribonuclease H 1626 40.53 0 1739300..1739869 + 189 183221053 - LEPBI_I1666 - hypothetical protein 1627 42.53 0 1739866..1740126 + 86 183221054 - LEPBI_I1667 - hypothetical protein 1628 40.99 0 1740161..1741348 + 395 183221055 - LEPBI_I1668 - HD family metal-dependent phosphohydrolase 1629 37.39 0 1741523..1741867 + 114 183221056 - LEPBI_I1669 - hypothetical protein 1630 35.59 0 1741949..1742170 + 73 183221057 - LEPBI_I1670 - hypothetical protein 1631 42.12 0 1742171..1743616 - 481 183221058 - LEPBI_I1671 - putative ATPase with chaperone activity 1632 38.42 0 1743713..1744105 + 130 183221059 - LEPBI_I1672 - putative lipoprotein 1633 43.68 +1 1744115..1745119 + 334 183221060 - LEPBI_I1673 - putative membrane peptidase 1634 43.50 +1 1745149..1746063 + 304 183221061 gspC LEPBI_I1674 - general secretion pathway protein C; putative signal peptide 1635 42.35 0 1746065..1747828 + 587 183221062 gspD LEPBI_I1675 - general secretory pathway protein D 1636 41.03 0 1747825..1749501 + 558 183221063 gspE LEPBI_I1676 - general secretion pathway protein E (Type II traffic warden ATPase) 1637 38.47 0 1749506..1750732 + 408 183221064 gspF LEPBI_I1677 - general secretion pathway protein F 1638 36.80 0 1750738..1751199 + 153 183221065 gspG LEPBI_I1678 - general secretory pathway protein G 1639 37.76 0 1751288..1751806 + 172 183221066 gspH LEPBI_I1679 - general secretion pathway protein H 1640 40.69 0 1751850..1752311 + 153 183221067 - LEPBI_I1680 - hypothetical protein 1641 37.05 0 1752311..1752982 + 223 183221068 - LEPBI_I1681 - putative pilisubunits; putative signal peptide 1642 41.67 0 1753002..1754045 + 347 183221069 gspK LEPBI_I1682 - general secretion pathway protein K; putative signal peptide 1643 33.83 -1 1754048..1755670 + 540 183221070 ftsA2 LEPBI_I1683 - cell division protein FtsA 1644 34.48 -1 1755670..1756194 + 174 183221071 - LEPBI_I1684 - hypothetical protein 1645 35.41 0 1756195..1757157 + 320 183221072 - LEPBI_I1685 - hypothetical protein 1646 43.12 +1 1757394..1761020 - 1208 183221073 nrdA LEPBI_I1686 - ribonucleoside-diphosphate reductase alpha subunit (ribonucleotide reductase) 1647 38.06 0 1761321..1762082 + 253 183221074 - LEPBI_I1687 - hypothetical protein 1648 41.51 0 1762234..1763700 - 488 183221075 - LEPBI_I1688 - putative flavin-containing monooxygenase 1649 36.59 0 1763990..1764112 + 40 183221076 - LEPBI_I1689 - hypothetical protein 1650 37.14 0 1764260..1764469 - 69 183221077 - LEPBI_I1691 - hypothetical protein 1651 38.54 0 1764557..1765132 + 191 183221078 - LEPBI_I1692 - hypothetical protein 1652 38.97 0 1765138..1765740 - 200 183221079 - LEPBI_I1693 - hypothetical protein 1653 39.02 0 1765944..1766330 + 128 183221080 - LEPBI_I1694 - putative signal peptide 1654 37.84 0 1766347..1768521 - 724 183221081 - LEPBI_I1695 - MFS superfamily sulfate transporter permease 1655 37.96 0 1768638..1769177 - 179 183221082 - LEPBI_I1696 - hypothetical protein 1656 42.90 0 1769351..1770040 + 229 183221083 sdhC LEPBI_I1697 - succinate dehydrogenase cytochrome B subunit SdhC; putative membrane protein 1657 45.48 +1 1770059..1771984 + 641 183221084 sdhA1 LEPBI_I1698 - succinate dehydrogenase flavoprotein subunit SdhA (fumarate reductase) 1658 44.26 +1 1771984..1772724 + 246 183221085 sdhB LEPBI_I1699 - succinate dehydrogenase iron-sulfur subunit SdhB 1659 34.78 0 1772791..1773621 - 276 183221086 - LEPBI_I1700 - hypothetical protein 1660 39.61 0 1773642..1774628 - 328 183221087 - LEPBI_I1701 - putative glycosyltransferase 1661 40.80 0 1774634..1775704 - 356 183221088 - LEPBI_I1702 - hypothetical protein 1662 44.57 +1 1775717..1777522 - 601 183221089 lepA LEPBI_I1703 - GTP-binding protein LepA 1663 44.78 +1 1777645..1778946 + 433 183221090 eno LEPBI_I1704 - enolase (2-phosphoglycerate dehydratase; 2-phospho-D-glycerate hydro-lyase) 1664 43.87 +1 1778948..1779412 + 154 183221091 - LEPBI_I1705 - hypothetical protein 1665 40.89 0 1779414..1780022 + 202 183221092 clpP1 LEPBI_I1706 - ATP-dependent Clp protease proteolytic subunit (ATP-dependent Clp protease proteolytic subunit) 1666 39.64 0 1780009..1781022 + 337 183221093 - LEPBI_I1707 - putative hydrolase 1667 44.30 +1 1781064..1782449 + 461 183221094 - LEPBI_I1708 - putative protease TldD 1668 39.55 0 1782446..1783828 + 460 183221095 - LEPBI_I1709 - putative protease tlde (PmbA) 1669 32.58 -1 1783831..1784364 + 177 183221096 - LEPBI_I1710 - hypothetical protein 1670 37.96 0 1784390..1784929 + 179 183221097 - LEPBI_I1711 - hypothetical protein 1671 37.35 0 1784940..1785686 - 248 183221098 - LEPBI_I1712 - hypothetical protein 1672 37.25 0 1785694..1786050 - 118 183221099 - LEPBI_I1713 - putative anti-sigma factor antagonist 1673 40.30 0 1786125..1786454 + 109 183221100 - LEPBI_I1714 - hypothetical protein 1674 37.35 0 1786491..1788008 + 505 183221101 - LEPBI_I1715 - hypothetical protein 1675 39.37 0 1788092..1788505 + 137 183221102 - LEPBI_I1716 - putative transcriptional regulator 1676 38.21 0 1788603..1790180 + 525 183221103 - LEPBI_I1717 - putative transporter; putative sodium and chloride dependent transporter; putative membrane protein 1677 37.61 0 1790181..1790297 + 38 183221104 - LEPBI_I1718 - hypothetical protein 1678 38.27 0 1790301..1792286 + 661 183221105 - LEPBI_I1719 - putative ATP-dependent helicase 1679 38.52 0 1792283..1793149 + 288 183221106 - LEPBI_I1720 - putative signal peptide 1680 34.95 0 1793112..1793915 - 267 183221107 - LEPBI_I1721 - hypothetical protein 1681 44.60 +1 1793975..1795279 - 434 183221108 asnS LEPBI_I1722 - asparaginyl-tRNA synthetase (asparagine--tRNA ligase; AsnRS) 1682 41.10 0 1795335..1796210 + 291 183221109 folD LEPBI_I1723 - FolD bifunctional proteins: methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolas 1683 37.56 0 1796194..1797162 + 322 183221110 - LEPBI_I1724 - hypothetical protein 1684 35.60 0 1797159..1798616 + 485 183221111 cysS LEPBI_I1725 - cysteinyl-tRNA synthetase (cysteine--tRNA ligase) 1685 38.89 0 1798670..1799371 + 233 183221112 - LEPBI_I1726 - TrmH family tRNA/rRNA methyltransferase 1686 37.43 0 1799358..1800455 + 365 183221113 - LEPBI_I1727 - putative signal peptide 1687 37.84 0 1800479..1802209 - 576 183221114 - LEPBI_I1728 - Sodium:solute symporter family protein; putative membrane protein; putative signal peptide 1688 41.41 0 1802206..1802973 - 255 183221115 hisF LEPBI_I1729 - imidazole glycerol phosphate synthase subunit HisF 1689 37.15 0 1802975..1804441 - 488 183221116 gatA LEPBI_I1730 - aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A 1690 30.53 -2 1804438..1804722 - 94 183221117 gatC LEPBI_I1731 - glutamyl-tRNA(Gln) amidotransferase subunit C 1 (Glu-ADT subunit C 1) 1691 34.76 0 1804732..1806132 - 466 183221118 - LEPBI_I1732 - putative undecaprenyl-phosphate galactose phosphotransferase; putative membrane protein 1692 38.95 0 1806146..1809103 - 985 183221119 - LEPBI_I1733 - putative cell envelope biogenesis protein; putative signal peptide 1693 38.46 0 1809278..1809628 + 116 183221120 - LEPBI_I1734 - hypothetical protein 1694 38.72 0 1809636..1810748 - 370 183221121 - LEPBI_I1735 - putative response regulator receiver 1695 36.84 0 1810808..1812802 + 664 183221122 pcrA3 LEPBI_I1736 - ATP-dependent DNA helicase PcrA 1696 37.55 0 1812847..1813392 + 181 183221123 - LEPBI_I1737 - putative signal peptide 1697 41.70 0 1813399..1814175 - 258 183221124 - LEPBI_I1738 - M48 family peptidase 1698 38.22 0 1814172..1816280 - 702 183221125 - LEPBI_I1739 - putative two-component sensor protein 1699 36.11 0 1816387..1816566 + 59 183221126 - LEPBI_I1740 - hypothetical protein 38.82 MEAN 4.08 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0