version 1.0
Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome I, complete sequence - 1..3599677 3391 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1534 36.54 0 1645292..1645603 + 103 183220961 - LEPBI_I1574 - hypothetical protein 1535 39.67 0 1645608..1648355 + 915 183220962 - LEPBI_I1575 - putative phosphodiesterase or phosphatase 1536 38.30 0 1648352..1648693 + 113 183220963 - LEPBI_I1576 - putative anti-sigma factor antagonist 1537 45.72 +1 1648741..1650387 + 548 183220964 accA LEPBI_I1577 - Acetyl-CoA carboxylase alpha subunit 1538 40.89 0 1650393..1653146 + 917 183220965 fabG7 LEPBI_I1578 - biotin carboxylase (A subunit of acetyl-CoA carboxylase; ACC) 1539 42.55 0 1653147..1654199 - 350 183220966 cheB4 LEPBI_I1579 - protein-glutamate methylesterase CheB 1540 36.20 0 1654203..1654691 - 162 183220967 cheD4 LEPBI_I1580 - chemotaxis protein cheD 1541 37.11 0 1654692..1655168 - 158 183220968 cheW4 LEPBI_I1581 - chemotaxis protein CheW 1542 38.21 0 1655183..1657909 - 908 183220969 - LEPBI_I1582 - putative methyl-accepting chemotaxis protein 1543 37.52 0 1657911..1660106 - 731 183220970 cheA4 LEPBI_I1583 - chemotaxis protein CheA 1544 37.10 0 1660106..1660477 - 123 183220971 - LEPBI_I1584 - putative anti-sigma factor antagonist 1545 35.25 0 1660480..1660845 - 121 183220972 cheY4 LEPBI_I1585 - chemotaxis protein CheY 1546 34.04 -1 1660857..1662137 - 426 183220973 - LEPBI_I1586 - putative transcriptional regulatory protein ZraR 1547 35.43 0 1662186..1663808 - 540 183220974 - LEPBI_I1587 - putative sensor protein 1548 41.88 0 1663810..1664757 - 315 183220975 ispH LEPBI_I1588 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1549 44.41 +1 1664994..1665842 + 282 183220976 flaB LEPBI_I1589 - flagellar filament core protein FlaB 1550 38.97 0 1666115..1667392 + 425 183220977 ilvA LEPBI_I1590 - threonine dehydratase biosynthetic 1551 35.44 0 1667735..1668352 - 205 183220978 metW LEPBI_I1591 - methionine biosynthesis protein; putative cystathionine synthase 1552 41.25 0 1668349..1669485 - 378 183220979 metX LEPBI_I1592 - homoserine O-acetyltransferase 1553 42.53 0 1669494..1670798 - 434 183220980 metY LEPBI_I1593 - O-acetylhomoserine sulfhydrylase 1554 38.65 0 1670952..1672550 + 532 183220981 - LEPBI_I1594 - hypothetical protein 1555 37.66 0 1672540..1673256 - 238 183220982 - LEPBI_I1595 - hypothetical protein 1556 38.18 0 1673260..1673754 - 164 183220983 - LEPBI_I1596 - hypothetical protein 1557 35.13 0 1673774..1674607 - 277 183220984 - LEPBI_I1597 - putative signal peptide 1558 42.66 0 1674730..1676016 - 428 183220985 - LEPBI_I1598 - ATPase 1559 48.94 +2 1676067..1676585 + 172 183220986 fliN LEPBI_I1599 - flagellar motor switch protein 1560 39.04 0 1676624..1677079 + 151 183220987 - LEPBI_I1600 - putative acetyltransferase 1561 46.43 +1 1677234..1677737 + 167 183220988 - LEPBI_I1601 - hypothetical protein 1562 43.00 +1 1677755..1678675 - 306 183220989 - LEPBI_I1602 - hypothetical protein 1563 41.26 0 1678677..1679597 - 306 183220990 - LEPBI_I1603 - hypothetical protein 1564 37.33 0 1679691..1680215 - 174 183220991 - LEPBI_I1604 - hypothetical protein 1565 40.09 0 1680242..1680670 + 142 183220992 - LEPBI_I1605 - putative signal peptide 1566 40.22 0 1680667..1682103 + 478 183220993 argH LEPBI_I1606 - argininosuccinate lyase (arginosuccinase; ASAL) 1567 41.38 0 1682100..1682981 + 293 183220994 - LEPBI_I1607 - putative peptidyl-prolyl cis-trans isomerase; putative peptide signal 1568 39.33 0 1682978..1683577 + 199 183220995 - LEPBI_I1608 - hypothetical protein 1569 41.13 0 1683657..1684643 + 328 183220996 - LEPBI_I1609 - hypothetical protein 1570 45.32 +1 1684640..1685665 + 341 183220997 - LEPBI_I1610 - flagellar motor switch protein FliM 1571 40.45 0 1685706..1687208 + 500 183220998 - LEPBI_I1611 - putative hydrolase; putative signal peptide 1572 36.99 0 1687290..1687508 - 72 183220999 - LEPBI_I1612 - putative ferredoxin 1573 38.37 0 1687505..1687762 - 85 183221000 - LEPBI_I1613 - hypothetical protein 1574 41.04 0 1687763..1688164 - 133 183221001 - LEPBI_I1614 - hypothetical protein 1575 42.78 0 1688207..1690006 + 599 183221002 guaA LEPBI_I1615 - GMP synthetase [glutamine-hydrolyzing] (glutamine amidotransferase; GMP synthetase) 1576 40.38 0 1690066..1690491 - 141 183221003 - LEPBI_I1616 - hypothetical protein 1577 55.56 +2 1690970..1691167 - 65 183221004 - LEPBI_I1617 - hypothetical protein 1578 38.51 0 1691205..1693136 - 643 183221005 - LEPBI_I1618 - hypothetical protein 1579 39.17 0 1693155..1693976 + 273 183221006 - LEPBI_I1619 - putative glycosyltransferase 1580 37.83 0 1694047..1694736 + 229 183221007 - LEPBI_I1620 - hypothetical protein 1581 41.16 0 1694726..1695313 + 195 183221008 gmhA LEPBI_I1621 - phosphoheptose isomerase (sedoheptulose 7-phosphate isomerase) 1582 39.77 0 1695456..1696061 + 201 183221009 - LEPBI_I1622 - ABC-type transport system, ATP binding protein, putative dipeptide/oligopeptide/nickel transport system 1583 39.13 0 1696186..1697496 + 436 183221010 - LEPBI_I1623 - hypothetical protein 1584 44.36 +1 1697498..1698331 + 277 183221011 - LEPBI_I1624 - hypothetical protein 1585 44.80 +1 1698410..1699804 + 464 183221012 leuC2 LEPBI_I1625 - 3-isopropylmalate dehydratase large subunit 1586 39.39 0 1699806..1700432 + 208 183221013 leuD2 LEPBI_I1626 - 3-isopropylmalate dehydratase small subunit 1587 41.86 0 1700432..1700818 + 128 183221014 fkpA LEPBI_I1627 - FK506-binding protein 1588 42.32 0 1700819..1701820 + 333 183221015 cysM LEPBI_I1628 - cysteine synthase B 1589 40.42 0 1701817..1703523 - 568 183221016 - LEPBI_I1629 - putative cyclic nucleotide-binding protein 1590 43.80 +1 1703654..1705363 + 569 183221017 - LEPBI_I1630 - putative DNA repair protein RecN 1591 44.72 +1 1705438..1706052 + 204 183221018 exbB3 LEPBI_I1631 - biopolymer transport ExbB protein; putative membrane protein 1592 36.57 0 1706063..1706494 + 143 183221019 exbD4 LEPBI_I1632 - biopolymer transport ExbD protein 1593 38.06 0 1706498..1709374 + 958 183221020 - LEPBI_I1633 - hypothetical protein 1594 36.86 0 1709375..1711558 + 727 183221021 pcrA1 LEPBI_I1634 - ATP-dependent DNA helicase PcrA 1595 31.24 -1 1711577..1712005 + 142 183221022 - LEPBI_I1635 - putative signal peptide 1596 36.78 0 1712028..1712897 + 289 183221023 cysQ LEPBI_I1636 - PAPS (adenosine 3'-phosphate 5'-phosphosulfate) 3'(2'),5'-bisphosphate nucleotidase 1597 38.77 0 1712891..1714030 + 379 183221024 - LEPBI_I1637 - putative glycosyltransferase 1598 40.45 0 1714013..1714321 - 102 183221025 - LEPBI_I1638 - hypothetical protein 1599 40.64 0 1714399..1714932 + 177 183221026 - LEPBI_I1639 - putative thioredoxin-related protein 1600 40.88 0 1715068..1717002 + 644 183221027 - LEPBI_I1640 - putative long-chain-fatty-acid CoA ligase 1601 35.71 0 1717089..1717760 + 223 183221028 - LEPBI_I1641 - hypothetical protein 1602 36.78 0 1717744..1718352 - 202 183221029 - LEPBI_I1642 - putative ATP-dependent protease La 1603 40.88 0 1718407..1719426 + 339 183221030 - LEPBI_I1643 - carbohydrate kinase subunit RfaE 1604 39.06 0 1719423..1719911 + 162 183221031 - LEPBI_I1644 - nucleotidyltransferase RfaE domain-containing protein 1605 39.19 0 1719975..1721597 + 540 183221032 pyrG LEPBI_I1645 - CTP synthase (UTP--ammonia ligase; CTP synthetase) 1606 42.08 0 1721599..1722444 + 281 183221033 kdsA LEPBI_I1646 - 2-dehydro-3-deoxyphosphooctonate aldolase 1607 37.52 0 1722478..1723002 + 174 183221034 - LEPBI_I1647 - hypothetical protein 1608 35.65 0 1722999..1724336 + 445 183221035 - LEPBI_I1648 - putative signal peptide 1609 38.77 0 1724395..1725093 + 232 183221036 - LEPBI_I1649 - ABC-type transport system, ATPase 1610 37.62 0 1725094..1726515 + 473 183221037 rpoN LEPBI_I1650 - RNA polymerase sigma-54 factor 1611 40.45 0 1726519..1727487 + 322 183221038 hprK LEPBI_I1651 - HPr kinase/phosphorylase (HPrK/P; HPr(Ser) kinase/phosphorylase) 1612 39.86 0 1727462..1727737 + 91 183221039 ptsH LEPBI_I1652 - phosphocarrier protein HPr (histidine-containing protein) 1613 35.09 0 1727727..1729550 + 607 183221040 - LEPBI_I1653 - histidine kinase sensor protein; putative membrane protein 1614 37.69 0 1729550..1730902 + 450 183221041 - LEPBI_I1654 - putative nitrogen assimilation regulatory protein NtrX 1615 35.41 0 1730904..1731722 + 272 183221042 - LEPBI_I1655 - hypothetical protein 1616 40.96 0 1731724..1733676 + 650 183221043 priA LEPBI_I1656 - primosomal protein N' (replication factor Y) 1617 46.03 +1 1733686..1734654 + 322 183221044 fmt LEPBI_I1657 - methionyl-tRNA formyltransferase 1618 40.20 0 1734651..1735670 + 339 183221045 - LEPBI_I1658 - putative signal peptide 1619 46.30 +1 1735672..1736334 + 220 183221046 rpe LEPBI_I1659 - ribulose-5-phosphate 3-epimerase 1620 41.42 0 1736331..1736639 + 102 183221047 rpsP LEPBI_I1660 - 30S ribosomal protein S16 1621 46.75 +1 1736647..1736877 + 76 183221048 - LEPBI_I1661 - RNA-binding protein 1622 44.38 +1 1736888..1737403 + 171 183221049 rimM LEPBI_I1662 - putative 16S rRNA processing protein RimM 1623 46.02 +1 1737393..1738046 + 217 183221050 trmD LEPBI_I1663 - tRNA (guanine-N(1)-)-methyltransferase 1624 41.96 0 1738055..1738483 + 142 183221051 rplS LEPBI_I1664 - 50S ribosomal protein L19 1625 43.87 +1 1738756..1739220 + 154 183221052 - LEPBI_I1665 - putative ribonuclease H 1626 40.53 0 1739300..1739869 + 189 183221053 - LEPBI_I1666 - hypothetical protein 1627 42.53 0 1739866..1740126 + 86 183221054 - LEPBI_I1667 - hypothetical protein 1628 40.99 0 1740161..1741348 + 395 183221055 - LEPBI_I1668 - HD family metal-dependent phosphohydrolase 1629 37.39 0 1741523..1741867 + 114 183221056 - LEPBI_I1669 - hypothetical protein 1630 35.59 0 1741949..1742170 + 73 183221057 - LEPBI_I1670 - hypothetical protein 1631 42.12 0 1742171..1743616 - 481 183221058 - LEPBI_I1671 - putative ATPase with chaperone activity 1632 38.42 0 1743713..1744105 + 130 183221059 - LEPBI_I1672 - putative lipoprotein 1633 43.68 +1 1744115..1745119 + 334 183221060 - LEPBI_I1673 - putative membrane peptidase 38.82 MEAN 4.08 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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