version 1.0
Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome I, complete sequence - 1..3599677 3391 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1509 37.33 0 1616701..1617702 + 333 183220936 - LEPBI_I1549 - two-component response regulator 1510 40.57 0 1617762..1618493 - 243 183220937 - LEPBI_I1550 - hypothetical protein 1511 40.18 0 1618533..1619189 - 218 183220938 - LEPBI_I1551 - putative L-fuculose-phosphate aldolase 1512 40.42 0 1619347..1621194 + 615 183220939 - LEPBI_I1552 - hypothetical protein 1513 36.11 0 1621335..1621766 + 143 183220940 - LEPBI_I1553 - hypothetical protein 1514 38.96 0 1621888..1622562 - 224 183220941 pgsA LEPBI_I1554 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyl-transferase 1515 43.14 +1 1622774..1623793 - 339 183220942 fliG3 LEPBI_I1555 - flagellar motor switch protein 1516 42.86 0 1623925..1624134 + 69 183220943 - LEPBI_I1556 - hypothetical protein 1517 45.09 +1 1624148..1625542 - 464 183220944 acoC LEPBI_I1557 - dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex 1518 45.54 +1 1625550..1626524 - 324 183220945 acoB LEPBI_I1558 - pyruvate dehydrogenase E1 beta subunit 1519 47.06 +2 1626525..1627493 - 322 183220946 acoA LEPBI_I1559 - pyruvate dehydrogenase E1 alpha subunit 1520 38.47 0 1627598..1628881 + 427 183220947 - LEPBI_I1560 - hypothetical protein 1521 36.95 0 1628940..1629188 - 82 183220948 - LEPBI_I1561 - hypothetical protein 1522 44.88 +1 1629292..1630443 - 383 183220949 fbp LEPBI_I1562 - fructose-1,6-bisphosphatase 1523 45.51 +1 1630443..1631255 + 270 183220950 - LEPBI_I1563 - hypothetical protein 1524 37.90 0 1631344..1631562 + 72 183220951 rpsU LEPBI_I1564 - 30S ribosomal protein S21 1525 42.54 0 1631582..1632037 + 151 183220952 - LEPBI_I1565 - hypothetical protein 1526 41.50 0 1632050..1633861 + 603 183220953 dnaG LEPBI_I1566 - DNA primase 1527 40.61 0 1633878..1635650 + 590 183220954 rpoD LEPBI_I1567 - RNA polymerase sigma factor rpoD (sigma-70) 1528 38.60 0 1635796..1636878 + 360 183220955 - LEPBI_I1568 - hypothetical protein 1529 42.79 0 1636932..1638539 - 535 183220956 glpD LEPBI_I1569 - aerobic glycerol-3-phosphate dehydrogenase 1530 43.68 +1 1638637..1639863 + 408 183220957 tyrS LEPBI_I1570 - tyrosyl-tRNA synthetase (tyrosine--tRNA ligase; TyrRS) 1531 40.39 0 1639935..1641125 + 396 183220958 - LEPBI_I1571 - hypothetical protein 1532 42.89 0 1641188..1644442 - 1084 183220959 - LEPBI_I1572 - putative cation efflux system protein; putative membrane protein; putative signal peptide 1533 42.04 0 1644490..1645029 - 179 183220960 def LEPBI_I1573 - peptide deformylase (PDF; polypeptide deformylase) 1534 36.54 0 1645292..1645603 + 103 183220961 - LEPBI_I1574 - hypothetical protein 1535 39.67 0 1645608..1648355 + 915 183220962 - LEPBI_I1575 - putative phosphodiesterase or phosphatase 1536 38.30 0 1648352..1648693 + 113 183220963 - LEPBI_I1576 - putative anti-sigma factor antagonist 1537 45.72 +1 1648741..1650387 + 548 183220964 accA LEPBI_I1577 - Acetyl-CoA carboxylase alpha subunit 1538 40.89 0 1650393..1653146 + 917 183220965 fabG7 LEPBI_I1578 - biotin carboxylase (A subunit of acetyl-CoA carboxylase; ACC) 1539 42.55 0 1653147..1654199 - 350 183220966 cheB4 LEPBI_I1579 - protein-glutamate methylesterase CheB 1540 36.20 0 1654203..1654691 - 162 183220967 cheD4 LEPBI_I1580 - chemotaxis protein cheD 1541 37.11 0 1654692..1655168 - 158 183220968 cheW4 LEPBI_I1581 - chemotaxis protein CheW 1542 38.21 0 1655183..1657909 - 908 183220969 - LEPBI_I1582 - putative methyl-accepting chemotaxis protein 1543 37.52 0 1657911..1660106 - 731 183220970 cheA4 LEPBI_I1583 - chemotaxis protein CheA 1544 37.10 0 1660106..1660477 - 123 183220971 - LEPBI_I1584 - putative anti-sigma factor antagonist 1545 35.25 0 1660480..1660845 - 121 183220972 cheY4 LEPBI_I1585 - chemotaxis protein CheY 1546 34.04 -1 1660857..1662137 - 426 183220973 - LEPBI_I1586 - putative transcriptional regulatory protein ZraR 1547 35.43 0 1662186..1663808 - 540 183220974 - LEPBI_I1587 - putative sensor protein 1548 41.88 0 1663810..1664757 - 315 183220975 ispH LEPBI_I1588 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1549 44.41 +1 1664994..1665842 + 282 183220976 flaB LEPBI_I1589 - flagellar filament core protein FlaB 1550 38.97 0 1666115..1667392 + 425 183220977 ilvA LEPBI_I1590 - threonine dehydratase biosynthetic 1551 35.44 0 1667735..1668352 - 205 183220978 metW LEPBI_I1591 - methionine biosynthesis protein; putative cystathionine synthase 1552 41.25 0 1668349..1669485 - 378 183220979 metX LEPBI_I1592 - homoserine O-acetyltransferase 1553 42.53 0 1669494..1670798 - 434 183220980 metY LEPBI_I1593 - O-acetylhomoserine sulfhydrylase 1554 38.65 0 1670952..1672550 + 532 183220981 - LEPBI_I1594 - hypothetical protein 1555 37.66 0 1672540..1673256 - 238 183220982 - LEPBI_I1595 - hypothetical protein 1556 38.18 0 1673260..1673754 - 164 183220983 - LEPBI_I1596 - hypothetical protein 1557 35.13 0 1673774..1674607 - 277 183220984 - LEPBI_I1597 - putative signal peptide 1558 42.66 0 1674730..1676016 - 428 183220985 - LEPBI_I1598 - ATPase 1559 48.94 +2 1676067..1676585 + 172 183220986 fliN LEPBI_I1599 - flagellar motor switch protein 1560 39.04 0 1676624..1677079 + 151 183220987 - LEPBI_I1600 - putative acetyltransferase 1561 46.43 +1 1677234..1677737 + 167 183220988 - LEPBI_I1601 - hypothetical protein 1562 43.00 +1 1677755..1678675 - 306 183220989 - LEPBI_I1602 - hypothetical protein 1563 41.26 0 1678677..1679597 - 306 183220990 - LEPBI_I1603 - hypothetical protein 1564 37.33 0 1679691..1680215 - 174 183220991 - LEPBI_I1604 - hypothetical protein 1565 40.09 0 1680242..1680670 + 142 183220992 - LEPBI_I1605 - putative signal peptide 1566 40.22 0 1680667..1682103 + 478 183220993 argH LEPBI_I1606 - argininosuccinate lyase (arginosuccinase; ASAL) 1567 41.38 0 1682100..1682981 + 293 183220994 - LEPBI_I1607 - putative peptidyl-prolyl cis-trans isomerase; putative peptide signal 1568 39.33 0 1682978..1683577 + 199 183220995 - LEPBI_I1608 - hypothetical protein 1569 41.13 0 1683657..1684643 + 328 183220996 - LEPBI_I1609 - hypothetical protein 1570 45.32 +1 1684640..1685665 + 341 183220997 - LEPBI_I1610 - flagellar motor switch protein FliM 1571 40.45 0 1685706..1687208 + 500 183220998 - LEPBI_I1611 - putative hydrolase; putative signal peptide 1572 36.99 0 1687290..1687508 - 72 183220999 - LEPBI_I1612 - putative ferredoxin 1573 38.37 0 1687505..1687762 - 85 183221000 - LEPBI_I1613 - hypothetical protein 1574 41.04 0 1687763..1688164 - 133 183221001 - LEPBI_I1614 - hypothetical protein 1575 42.78 0 1688207..1690006 + 599 183221002 guaA LEPBI_I1615 - GMP synthetase [glutamine-hydrolyzing] (glutamine amidotransferase; GMP synthetase) 1576 40.38 0 1690066..1690491 - 141 183221003 - LEPBI_I1616 - hypothetical protein 1577 55.56 +2 1690970..1691167 - 65 183221004 - LEPBI_I1617 - hypothetical protein 1578 38.51 0 1691205..1693136 - 643 183221005 - LEPBI_I1618 - hypothetical protein 1579 39.17 0 1693155..1693976 + 273 183221006 - LEPBI_I1619 - putative glycosyltransferase 1580 37.83 0 1694047..1694736 + 229 183221007 - LEPBI_I1620 - hypothetical protein 1581 41.16 0 1694726..1695313 + 195 183221008 gmhA LEPBI_I1621 - phosphoheptose isomerase (sedoheptulose 7-phosphate isomerase) 1582 39.77 0 1695456..1696061 + 201 183221009 - LEPBI_I1622 - ABC-type transport system, ATP binding protein, putative dipeptide/oligopeptide/nickel transport system 1583 39.13 0 1696186..1697496 + 436 183221010 - LEPBI_I1623 - hypothetical protein 1584 44.36 +1 1697498..1698331 + 277 183221011 - LEPBI_I1624 - hypothetical protein 1585 44.80 +1 1698410..1699804 + 464 183221012 leuC2 LEPBI_I1625 - 3-isopropylmalate dehydratase large subunit 1586 39.39 0 1699806..1700432 + 208 183221013 leuD2 LEPBI_I1626 - 3-isopropylmalate dehydratase small subunit 1587 41.86 0 1700432..1700818 + 128 183221014 fkpA LEPBI_I1627 - FK506-binding protein 1588 42.32 0 1700819..1701820 + 333 183221015 cysM LEPBI_I1628 - cysteine synthase B 1589 40.42 0 1701817..1703523 - 568 183221016 - LEPBI_I1629 - putative cyclic nucleotide-binding protein 1590 43.80 +1 1703654..1705363 + 569 183221017 - LEPBI_I1630 - putative DNA repair protein RecN 1591 44.72 +1 1705438..1706052 + 204 183221018 exbB3 LEPBI_I1631 - biopolymer transport ExbB protein; putative membrane protein 1592 36.57 0 1706063..1706494 + 143 183221019 exbD4 LEPBI_I1632 - biopolymer transport ExbD protein 1593 38.06 0 1706498..1709374 + 958 183221020 - LEPBI_I1633 - hypothetical protein 1594 36.86 0 1709375..1711558 + 727 183221021 pcrA1 LEPBI_I1634 - ATP-dependent DNA helicase PcrA 1595 31.24 -1 1711577..1712005 + 142 183221022 - LEPBI_I1635 - putative signal peptide 1596 36.78 0 1712028..1712897 + 289 183221023 cysQ LEPBI_I1636 - PAPS (adenosine 3'-phosphate 5'-phosphosulfate) 3'(2'),5'-bisphosphate nucleotidase 1597 38.77 0 1712891..1714030 + 379 183221024 - LEPBI_I1637 - putative glycosyltransferase 1598 40.45 0 1714013..1714321 - 102 183221025 - LEPBI_I1638 - hypothetical protein 1599 40.64 0 1714399..1714932 + 177 183221026 - LEPBI_I1639 - putative thioredoxin-related protein 1600 40.88 0 1715068..1717002 + 644 183221027 - LEPBI_I1640 - putative long-chain-fatty-acid CoA ligase 1601 35.71 0 1717089..1717760 + 223 183221028 - LEPBI_I1641 - hypothetical protein 1602 36.78 0 1717744..1718352 - 202 183221029 - LEPBI_I1642 - putative ATP-dependent protease La 1603 40.88 0 1718407..1719426 + 339 183221030 - LEPBI_I1643 - carbohydrate kinase subunit RfaE 1604 39.06 0 1719423..1719911 + 162 183221031 - LEPBI_I1644 - nucleotidyltransferase RfaE domain-containing protein 1605 39.19 0 1719975..1721597 + 540 183221032 pyrG LEPBI_I1645 - CTP synthase (UTP--ammonia ligase; CTP synthetase) 1606 42.08 0 1721599..1722444 + 281 183221033 kdsA LEPBI_I1646 - 2-dehydro-3-deoxyphosphooctonate aldolase 1607 37.52 0 1722478..1723002 + 174 183221034 - LEPBI_I1647 - hypothetical protein 1608 35.65 0 1722999..1724336 + 445 183221035 - LEPBI_I1648 - putative signal peptide 38.82 MEAN 4.08 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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