version 1.0
Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome I, complete sequence - 1..3599677 3391 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1477 39.41 0 1582475..1583215 + 246 183220904 - LEPBI_I1517 - hypothetical protein 1478 42.68 0 1583522..1583992 + 156 183220905 - LEPBI_I1518 - putative transcriptional regulator 1479 43.10 +1 1584003..1584422 + 139 183220906 - LEPBI_I1519 - hypothetical protein 1480 38.24 0 1584423..1585034 - 203 183220907 - LEPBI_I1520 - hypothetical protein 1481 41.09 0 1585034..1586542 - 502 183220908 - LEPBI_I1521 - hypothetical protein 1482 43.09 +1 1586543..1587649 - 368 183220909 - LEPBI_I1522 - hypothetical protein 1483 44.17 +1 1587782..1588270 + 162 183220910 - LEPBI_I1523 - hypothetical protein 1484 46.04 +1 1588275..1589675 + 466 183220911 nusA LEPBI_I1524 - N utilization substance protein A 1485 47.93 +2 1589691..1592444 + 917 183220912 infB LEPBI_I1525 - translation initiation factor IF-2 1486 40.89 0 1592455..1592904 + 149 183220913 rbfA LEPBI_I1526 - ribosome-binding factor A 1487 46.99 +2 1592973..1593902 + 309 183220914 truB LEPBI_I1527 - tRNA pseudouridine synthase B 1488 39.70 0 1593929..1594195 + 88 183220915 rpsO LEPBI_I1528 - 30S ribosomal protein S15 1489 43.57 +1 1594201..1596291 + 696 183220916 pnp LEPBI_I1529 - polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase; PNPase) 1490 40.09 0 1596329..1597615 + 428 183220917 - LEPBI_I1530 - putative Zn-dependent peptidase 1491 52.44 +2 1597669..1598118 + 149 183220918 dut LEPBI_I1531 - deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase; dUTP pyrophosphatase) 1492 45.99 +1 1598190..1598987 + 265 183220919 flgG1 LEPBI_I1532 - flagellar basal-body rod protein FlgG (Distal rod protein) 1493 39.49 0 1598987..1599928 + 313 183220920 flgA LEPBI_I1533 - flagellar protein FlgA; putative signal peptide 1494 37.88 0 1599929..1600720 + 263 183220921 flgH LEPBI_I1534 - flagellar L-ring protein (basal body L-ring protein) 1495 44.61 +1 1600713..1601891 + 392 183220922 flgI LEPBI_I1535 - flagellar P-ring protein (basal body P-ring protein) 1496 38.27 0 1601927..1602412 + 161 183220923 flgJ LEPBI_I1536 - peptidoglycan hydrolase FlgJ (muramidase FlgJ) 1497 39.50 0 1602409..1604793 - 794 183220924 - LEPBI_I1537 - putative ribonuclease BN; putative membrane protein 1498 40.82 0 1604803..1605684 - 293 183220925 - LEPBI_I1538 - putative S-adenosylmethionine-dependent methyltransferase 1499 40.23 0 1605684..1606292 - 202 183220926 - LEPBI_I1539 - putative S-adenosylmethionine-dependent methyltransferase 1500 38.65 0 1606289..1607491 - 400 183220927 - LEPBI_I1540 - hypothetical protein 1501 49.59 +2 1607492..1607860 - 122 183220928 - LEPBI_I1541 - putative glycine-rich RNA binding protein 1502 43.21 +1 1607974..1608834 + 286 183220929 flgG2 LEPBI_I1542 - flagellar basal-body rod protein FlgG (Distal rod protein) 1503 34.88 0 1608977..1609300 - 107 183220930 - LEPBI_I1543 - hypothetical protein 1504 39.72 0 1609476..1610477 - 333 183220931 - LEPBI_I1544 - zinc-containing alcohol dehydrogenase superfamily protein 1505 35.45 0 1610502..1611305 - 267 183220932 - LEPBI_I1545 - putative short-chain dehydrogenase/reductase SDR 1506 35.95 0 1611421..1611840 + 139 183220933 - LEPBI_I1546 - hypothetical protein 1507 42.97 +1 1612096..1612884 - 262 183220934 - LEPBI_I1547 - putative short-chain dehydrogenase/reductase SDR 1508 36.92 0 1613103..1616723 + 1206 183220935 - LEPBI_I1548 - putative signal transduction histidine kinase; putative membrane protein 1509 37.33 0 1616701..1617702 + 333 183220936 - LEPBI_I1549 - two-component response regulator 1510 40.57 0 1617762..1618493 - 243 183220937 - LEPBI_I1550 - hypothetical protein 1511 40.18 0 1618533..1619189 - 218 183220938 - LEPBI_I1551 - putative L-fuculose-phosphate aldolase 1512 40.42 0 1619347..1621194 + 615 183220939 - LEPBI_I1552 - hypothetical protein 1513 36.11 0 1621335..1621766 + 143 183220940 - LEPBI_I1553 - hypothetical protein 1514 38.96 0 1621888..1622562 - 224 183220941 pgsA LEPBI_I1554 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyl-transferase 1515 43.14 +1 1622774..1623793 - 339 183220942 fliG3 LEPBI_I1555 - flagellar motor switch protein 1516 42.86 0 1623925..1624134 + 69 183220943 - LEPBI_I1556 - hypothetical protein 1517 45.09 +1 1624148..1625542 - 464 183220944 acoC LEPBI_I1557 - dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex 1518 45.54 +1 1625550..1626524 - 324 183220945 acoB LEPBI_I1558 - pyruvate dehydrogenase E1 beta subunit 1519 47.06 +2 1626525..1627493 - 322 183220946 acoA LEPBI_I1559 - pyruvate dehydrogenase E1 alpha subunit 1520 38.47 0 1627598..1628881 + 427 183220947 - LEPBI_I1560 - hypothetical protein 1521 36.95 0 1628940..1629188 - 82 183220948 - LEPBI_I1561 - hypothetical protein 1522 44.88 +1 1629292..1630443 - 383 183220949 fbp LEPBI_I1562 - fructose-1,6-bisphosphatase 1523 45.51 +1 1630443..1631255 + 270 183220950 - LEPBI_I1563 - hypothetical protein 1524 37.90 0 1631344..1631562 + 72 183220951 rpsU LEPBI_I1564 - 30S ribosomal protein S21 1525 42.54 0 1631582..1632037 + 151 183220952 - LEPBI_I1565 - hypothetical protein 1526 41.50 0 1632050..1633861 + 603 183220953 dnaG LEPBI_I1566 - DNA primase 1527 40.61 0 1633878..1635650 + 590 183220954 rpoD LEPBI_I1567 - RNA polymerase sigma factor rpoD (sigma-70) 1528 38.60 0 1635796..1636878 + 360 183220955 - LEPBI_I1568 - hypothetical protein 1529 42.79 0 1636932..1638539 - 535 183220956 glpD LEPBI_I1569 - aerobic glycerol-3-phosphate dehydrogenase 1530 43.68 +1 1638637..1639863 + 408 183220957 tyrS LEPBI_I1570 - tyrosyl-tRNA synthetase (tyrosine--tRNA ligase; TyrRS) 1531 40.39 0 1639935..1641125 + 396 183220958 - LEPBI_I1571 - hypothetical protein 1532 42.89 0 1641188..1644442 - 1084 183220959 - LEPBI_I1572 - putative cation efflux system protein; putative membrane protein; putative signal peptide 1533 42.04 0 1644490..1645029 - 179 183220960 def LEPBI_I1573 - peptide deformylase (PDF; polypeptide deformylase) 1534 36.54 0 1645292..1645603 + 103 183220961 - LEPBI_I1574 - hypothetical protein 1535 39.67 0 1645608..1648355 + 915 183220962 - LEPBI_I1575 - putative phosphodiesterase or phosphatase 1536 38.30 0 1648352..1648693 + 113 183220963 - LEPBI_I1576 - putative anti-sigma factor antagonist 1537 45.72 +1 1648741..1650387 + 548 183220964 accA LEPBI_I1577 - Acetyl-CoA carboxylase alpha subunit 1538 40.89 0 1650393..1653146 + 917 183220965 fabG7 LEPBI_I1578 - biotin carboxylase (A subunit of acetyl-CoA carboxylase; ACC) 1539 42.55 0 1653147..1654199 - 350 183220966 cheB4 LEPBI_I1579 - protein-glutamate methylesterase CheB 1540 36.20 0 1654203..1654691 - 162 183220967 cheD4 LEPBI_I1580 - chemotaxis protein cheD 1541 37.11 0 1654692..1655168 - 158 183220968 cheW4 LEPBI_I1581 - chemotaxis protein CheW 1542 38.21 0 1655183..1657909 - 908 183220969 - LEPBI_I1582 - putative methyl-accepting chemotaxis protein 1543 37.52 0 1657911..1660106 - 731 183220970 cheA4 LEPBI_I1583 - chemotaxis protein CheA 1544 37.10 0 1660106..1660477 - 123 183220971 - LEPBI_I1584 - putative anti-sigma factor antagonist 1545 35.25 0 1660480..1660845 - 121 183220972 cheY4 LEPBI_I1585 - chemotaxis protein CheY 1546 34.04 -1 1660857..1662137 - 426 183220973 - LEPBI_I1586 - putative transcriptional regulatory protein ZraR 1547 35.43 0 1662186..1663808 - 540 183220974 - LEPBI_I1587 - putative sensor protein 1548 41.88 0 1663810..1664757 - 315 183220975 ispH LEPBI_I1588 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1549 44.41 +1 1664994..1665842 + 282 183220976 flaB LEPBI_I1589 - flagellar filament core protein FlaB 1550 38.97 0 1666115..1667392 + 425 183220977 ilvA LEPBI_I1590 - threonine dehydratase biosynthetic 1551 35.44 0 1667735..1668352 - 205 183220978 metW LEPBI_I1591 - methionine biosynthesis protein; putative cystathionine synthase 1552 41.25 0 1668349..1669485 - 378 183220979 metX LEPBI_I1592 - homoserine O-acetyltransferase 1553 42.53 0 1669494..1670798 - 434 183220980 metY LEPBI_I1593 - O-acetylhomoserine sulfhydrylase 1554 38.65 0 1670952..1672550 + 532 183220981 - LEPBI_I1594 - hypothetical protein 1555 37.66 0 1672540..1673256 - 238 183220982 - LEPBI_I1595 - hypothetical protein 1556 38.18 0 1673260..1673754 - 164 183220983 - LEPBI_I1596 - hypothetical protein 1557 35.13 0 1673774..1674607 - 277 183220984 - LEPBI_I1597 - putative signal peptide 1558 42.66 0 1674730..1676016 - 428 183220985 - LEPBI_I1598 - ATPase 1559 48.94 +2 1676067..1676585 + 172 183220986 fliN LEPBI_I1599 - flagellar motor switch protein 1560 39.04 0 1676624..1677079 + 151 183220987 - LEPBI_I1600 - putative acetyltransferase 1561 46.43 +1 1677234..1677737 + 167 183220988 - LEPBI_I1601 - hypothetical protein 1562 43.00 +1 1677755..1678675 - 306 183220989 - LEPBI_I1602 - hypothetical protein 1563 41.26 0 1678677..1679597 - 306 183220990 - LEPBI_I1603 - hypothetical protein 1564 37.33 0 1679691..1680215 - 174 183220991 - LEPBI_I1604 - hypothetical protein 1565 40.09 0 1680242..1680670 + 142 183220992 - LEPBI_I1605 - putative signal peptide 1566 40.22 0 1680667..1682103 + 478 183220993 argH LEPBI_I1606 - argininosuccinate lyase (arginosuccinase; ASAL) 1567 41.38 0 1682100..1682981 + 293 183220994 - LEPBI_I1607 - putative peptidyl-prolyl cis-trans isomerase; putative peptide signal 1568 39.33 0 1682978..1683577 + 199 183220995 - LEPBI_I1608 - hypothetical protein 1569 41.13 0 1683657..1684643 + 328 183220996 - LEPBI_I1609 - hypothetical protein 1570 45.32 +1 1684640..1685665 + 341 183220997 - LEPBI_I1610 - flagellar motor switch protein FliM 1571 40.45 0 1685706..1687208 + 500 183220998 - LEPBI_I1611 - putative hydrolase; putative signal peptide 1572 36.99 0 1687290..1687508 - 72 183220999 - LEPBI_I1612 - putative ferredoxin 1573 38.37 0 1687505..1687762 - 85 183221000 - LEPBI_I1613 - hypothetical protein 1574 41.04 0 1687763..1688164 - 133 183221001 - LEPBI_I1614 - hypothetical protein 1575 42.78 0 1688207..1690006 + 599 183221002 guaA LEPBI_I1615 - GMP synthetase [glutamine-hydrolyzing] (glutamine amidotransferase; GMP synthetase) 1576 40.38 0 1690066..1690491 - 141 183221003 - LEPBI_I1616 - hypothetical protein 38.82 MEAN 4.08 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0