version 1.0
Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome I, complete sequence - 1..3599677 3391 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1216 37.01 0 1295698..1296594 + 298 183220643 - LEPBI_I1251 - hypothetical protein 1217 43.13 +1 1296863..1298128 + 421 183220644 - LEPBI_I1252 - putative signal peptide 1218 38.64 0 1298141..1298818 + 225 183220645 - LEPBI_I1253 - hypothetical protein 1219 41.46 0 1298904..1300466 + 520 183220646 - LEPBI_I1254 - HEAT-like repeat-containing protein 1220 38.45 0 1300556..1301083 - 175 183220647 - LEPBI_I1255 - hypothetical protein 1221 40.09 0 1301080..1302351 - 423 183220648 - LEPBI_I1256 - putative cobalt reductase 1222 40.00 0 1302357..1302491 + 44 183220649 - LEPBI_I1257 - hypothetical protein 1223 38.81 0 1302543..1304150 + 535 183220650 - LEPBI_I1258 - putative methyl-accepting chemotaxis protein; putative membrane protein 1224 43.00 +1 1304279..1306036 + 585 183220651 - LEPBI_I1259 - Acyl-CoA dehydrogenase family protein 1225 40.49 0 1306269..1307036 + 255 183220652 - LEPBI_I1260 - putative metal-dependent hydrolase 1226 40.24 0 1307090..1307842 + 250 183220653 - LEPBI_I1262 - hypothetical protein 1227 43.99 +1 1308116..1309222 + 368 183220654 - LEPBI_I1263 - hypothetical protein 1228 39.98 0 1309238..1310200 + 320 183220655 - LEPBI_I1264 - ABC-type transport system, periplasmic adhesin; putative signal peptide 1229 42.66 0 1310238..1310891 + 217 183220656 - LEPBI_I1265 - ABC-type transport system, ATPase 1230 41.40 0 1310884..1311738 + 284 183220657 - LEPBI_I1266 - ABC-type transport system, permease; putative membrane protein 1231 42.68 0 1311746..1312633 + 295 183220658 - LEPBI_I1267 - putative 3-demethylubiquinone-9 3-O-methyltransferase 1232 41.50 0 1312630..1313241 - 203 183220659 tmk LEPBI_I1268 - thymidylate kinase (dTMP kinase) 1233 38.92 0 1313675..1314946 + 423 183220660 - LEPBI_I1269 - diguanylate phosphodiesterase 1234 42.39 0 1314979..1316910 + 643 183220661 - LEPBI_I1270 - hypothetical protein 1235 38.60 0 1316925..1318082 - 385 183220662 - LEPBI_I1271 - hypothetical protein 1236 43.48 +1 1318180..1319706 + 508 183220663 guaB LEPBI_I1272 - inosine-5'-monophosphate dehydrogenase 1237 39.30 0 1319716..1320486 + 256 183220664 - LEPBI_I1273 - putative signal peptide 1238 40.09 0 1320499..1321179 + 226 183220665 - LEPBI_I1274 - hypothetical protein 1239 39.23 0 1321551..1323026 + 491 183220666 - LEPBI_I1276 - hypothetical protein 1240 38.40 0 1323027..1324211 + 394 183220667 - LEPBI_I1277 - hypothetical protein 1241 38.30 0 1324224..1325009 + 261 183220668 - LEPBI_I1278 - hypothetical protein 1242 42.90 0 1325197..1330800 + 1867 183220669 - LEPBI_I1279 - putative signal peptide 1243 39.01 0 1330830..1333103 + 757 183220670 - LEPBI_I1280 - putative sulfatase; putative membrane protein 1244 41.73 0 1333121..1336432 + 1103 183220671 carB LEPBI_I1281 - carbamoyl-phosphate synthase large subunit 1245 37.50 0 1336539..1336994 - 151 183220672 - LEPBI_I1282 - hypothetical protein 1246 35.57 0 1337019..1338272 - 417 183220673 - LEPBI_I1283 - hypothetical protein 1247 37.12 0 1338269..1339957 - 562 183220674 - LEPBI_I1284 - hypothetical protein 1248 42.46 0 1340001..1342028 - 675 183220675 ispG LEPBI_I1285 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase) 1249 41.55 0 1342247..1342453 + 68 183220676 - LEPBI_I1286 - hypothetical protein 1250 38.98 0 1342450..1343511 + 353 183220677 - LEPBI_I1287 - putative A/G-specific DNA glycosylase 1251 38.68 0 1343536..1346247 + 903 183220678 - LEPBI_I1288 - hypothetical protein 1252 42.45 0 1346263..1346679 + 138 183220679 - LEPBI_I1289 - putative two-component response regulator 1253 45.65 +1 1346701..1346976 + 91 183220680 - LEPBI_I1290 - putative DNA mismatch repair protein 1254 42.19 0 1346973..1348508 + 511 183220681 leuA1 LEPBI_I1291 - 2-isopropylmalate synthase (Alpha-isopropylmalate synthase; Alpha-IPM synthetase 1) 1255 43.03 +1 1348505..1349071 + 188 183220682 pthA LEPBI_I1292 - peptidyl-tRNA hydrolase (PTH) 1256 42.33 0 1349122..1349721 + 199 183220683 - LEPBI_I1293 - putative cytoplasmic membrane protein 1257 38.74 0 1349723..1349944 + 73 183220684 - LEPBI_I1294 - hypothetical protein 1258 46.11 +1 1349946..1351205 + 419 183220685 - LEPBI_I1295 - putative ATPase involved in DNA replication 1259 39.90 0 1351303..1351698 + 131 183220686 nuoA LEPBI_I1296 - NADH-quinone oxidoreductase, chain A 1260 45.81 +1 1351689..1352249 + 186 183220687 nuoB LEPBI_I1297 - NADH-quinone oxidoreductase chain B 1261 43.30 +1 1352246..1352767 + 173 183220688 nuoC LEPBI_I1298 - NADH-quinone oxidoreductase, chain C 1262 43.24 +1 1352784..1354004 + 406 183220689 nuoD LEPBI_I1299 - NADH-quinone oxidoreductase, chain D 1263 41.21 0 1353998..1354492 + 164 183220690 nuoE LEPBI_I1300 - NADH-quinone oxidoreductase, chain E 1264 43.87 +1 1354494..1355765 + 423 183220691 nuoF LEPBI_I1301 - NADH-quinone oxidoreductase, chain F 1265 43.98 +1 1355781..1356851 + 356 183220692 nuoH LEPBI_I1302 - NADH-quinone oxidoreductase, chain H 1266 40.83 0 1356848..1357447 + 199 183220693 nuoJ LEPBI_I1303 - NADH-quinone oxidoreductase, chain J 1267 42.99 +1 1357444..1357764 + 106 183220694 nuoK LEPBI_I1304 - NADH-quinone oxidoreductase, chain K 1268 39.76 0 1357769..1359697 + 642 183220695 nuoL LEPBI_I1305 - NADH-quinone oxidoreductase, chain L 1269 39.83 0 1359699..1361438 + 579 183220696 nuoM LEPBI_I1306 - NADH-quinone oxidoreductase, chain M 1270 41.37 0 1361442..1362884 + 480 183220697 nuoN LEPBI_I1307 - NADH-quinone oxidoreductase, chain N 1271 41.67 0 1362970..1363509 + 179 183220698 - LEPBI_I1308 - putative acireductone dioxygenase, ARD 1272 40.93 0 1363581..1365569 - 662 183220699 recJ LEPBI_I1309 - single-stranded-DNA-specific exonuclease RecJ 1273 37.69 0 1365590..1365910 - 106 183220700 - LEPBI_I1310 - hypothetical protein 1274 42.20 0 1366064..1366390 + 108 183220701 - LEPBI_I1311 - hypothetical protein 1275 42.78 0 1366464..1369754 + 1096 183220702 - LEPBI_I1312 - putative heavy metal efflux pump CzcA; putative signal peptide 1276 39.90 0 1369755..1370378 + 207 183220703 ppa LEPBI_I1313 - inorganic pyrophosphatase (pyrophosphate phospho-hydrolase; PPase) 1277 37.33 0 1370375..1371700 + 441 183220704 - LEPBI_I1314 - putative cation efflux system protein CzcC 1278 38.24 0 1371707..1372888 + 393 183220705 - LEPBI_I1315 - putative cobalt-zinc-cadmium resistance protein CzcB 1279 47.45 +2 1372939..1373547 + 202 183220706 lexA LEPBI_I1316 - LexA repressor 1280 40.89 0 1373584..1373874 + 96 183220707 - LEPBI_I1317 - hypothetical protein 1281 37.86 0 1373867..1375237 + 456 183220708 - LEPBI_I1318 - putative carboxy-terminal processing protease 1282 40.84 0 1375238..1376263 + 341 183220709 - LEPBI_I1319 - putative O-sialoglycoprotein endopeptidase 1283 42.59 0 1376260..1377015 + 251 183220710 pssA LEPBI_I1320 - CDP-diacylglycerol--serine O-phosphatidyltransferase 1284 34.63 -1 1377017..1377325 - 102 183220711 - LEPBI_I1321 - putative anti-sigma factor antagonist 1285 39.92 0 1377411..1378367 + 318 183220712 - LEPBI_I1322 - beta-lactamase family hydrolase 1286 41.82 0 1378369..1379865 + 498 183220713 glpK LEPBI_I1323 - glycerol kinase 1287 38.76 0 1379876..1381054 - 392 183220714 - LEPBI_I1324 - putative flagellar motor switch protein 1288 39.02 0 1381051..1381296 - 81 183220715 - LEPBI_I1325 - hypothetical protein 1289 40.96 0 1381304..1382470 - 388 183220716 - LEPBI_I1326 - putative alcohol dehydrogenase 1290 39.76 0 1382554..1382880 - 108 183220717 - LEPBI_I1327 - hypothetical protein 1291 45.92 +1 1382901..1383623 - 240 183220718 - LEPBI_I1328 - putative methyltransferase 1292 47.37 +2 1383613..1384353 - 246 183220719 - LEPBI_I1329 - hypothetical protein 1293 45.83 +1 1384396..1385091 + 231 183220720 - LEPBI_I1330 - hypothetical protein 1294 41.99 0 1385088..1387028 - 646 183220721 - LEPBI_I1331 - putative glutamine-dependent NAD(+) synthetase 1295 39.98 0 1387015..1388292 - 425 183220722 - LEPBI_I1332 - putative 3-deoxy-D-manno-octulosonic-acid transferase 1296 42.17 0 1388293..1389039 - 248 183220723 - LEPBI_I1333 - putative signal peptide 1297 39.73 0 1389112..1389924 + 270 183220724 - LEPBI_I1334 - putative signal peptide 1298 37.77 0 1389927..1390625 + 232 183220725 - LEPBI_I1335 - hypothetical protein 1299 48.12 +2 1390654..1391397 + 247 183220726 proC LEPBI_I1336 - pyrroline-5-carboxylate reductase (P5CR; P5C reductase) 1300 43.03 +1 1391644..1392705 + 353 183220727 - LEPBI_I1337 - hypothetical protein 1301 39.91 0 1392728..1392955 + 75 183220728 - LEPBI_I1338 - hypothetical protein 1302 45.07 +1 1392979..1393830 + 283 183220729 - LEPBI_I1339 - hypothetical protein 1303 42.52 0 1393832..1394974 + 380 183220730 trmU LEPBI_I1340 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 1304 44.74 +1 1394971..1397223 + 750 183220731 - LEPBI_I1341 - putative oxidase or carboxylase 1305 42.00 0 1397220..1398488 + 422 183220732 - LEPBI_I1342 - hypothetical protein 1306 38.73 0 1398489..1399451 + 320 183220733 - LEPBI_I1343 - putative ribosomal large subunit pseudouridine synthase 1307 38.60 0 1399528..1400685 + 385 183220734 - LEPBI_I1344 - putative methyltransferase DNA modification enzyme 1308 37.53 0 1400697..1401125 + 142 183220735 - LEPBI_I1345 - putative signal peptide 1309 36.69 0 1401130..1401576 - 148 183220736 - LEPBI_I1346 - putative signal peptide 1310 41.92 0 1401577..1402263 - 228 183220737 - LEPBI_I1347 - putative signal peptide 1311 37.09 0 1402273..1403817 + 514 183220738 - LEPBI_I1348 - putative metalloendopeptidase 1312 39.06 0 1403820..1405217 + 465 183220739 - LEPBI_I1349 - putative metallopeptidase; putative signal peptide 1313 37.14 0 1405217..1406056 + 279 183220740 - LEPBI_I1350 - putative metallo-hydrolase/oxidoreductase 1314 42.59 0 1406053..1406700 + 215 183220741 - LEPBI_I1351 - putative O-methyltransferase 1315 39.14 0 1406728..1407519 + 263 183220742 - LEPBI_I1352 - putative signal peptide 38.82 MEAN 4.08 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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