version 1.0
Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome I, complete sequence - 1..3599677 3391 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1131 41.64 0 1209101..1210015 + 304 183220558 cysK1 LEPBI_I1162 - cysteine synthase A 1132 35.57 0 1210111..1211988 + 625 183220559 topA LEPBI_I1163 - DNA topoisomerase I 1133 39.30 0 1211978..1213066 + 362 183220560 hemH LEPBI_I1164 - ferrochelatase (Protoheme ferro-lyase; Heme synthetase) 1134 36.72 0 1213037..1214248 - 403 183220561 hemG LEPBI_I1165 - protoporphyrinogen oxidase (PPO) 1135 37.73 0 1214245..1215585 - 446 183220562 hemN LEPBI_I1166 - oxygen-independent coproporphyrinogen III oxidase (coproporphyrinogenase; coprogen oxidase) 1136 38.31 0 1215582..1216625 - 347 183220563 hemE LEPBI_I1167 - uroporphyrinogen decarboxylase 1137 42.41 0 1216629..1217906 - 425 183220564 hemL1 LEPBI_I1168 - glutamate-1-semialdehyde aminotransferase 1138 39.10 0 1217903..1218856 - 317 183220565 hemB LEPBI_I1169 - Delta-aminolevulinic acid dehydratase 1139 37.50 0 1218853..1220388 - 511 183220566 hemC LEPBI_I1170 - porphobilinogen deaminase (PBG; hydroxymethylbilane synthase) 1140 38.37 0 1220381..1221253 - 290 183220567 hemA LEPBI_I1171 - glutamyl-tRNA reductase (GluTR) 1141 44.62 +1 1221363..1221743 + 126 183220568 msrB LEPBI_I1172 - peptide methionine sulfoxide reductase MsrB 1142 35.77 0 1221784..1221906 - 40 183220569 - LEPBI_I1173 - hypothetical protein 1143 43.14 +1 1222040..1222498 - 152 183220570 - LEPBI_I1174 - hypothetical protein 1144 48.29 +2 1222668..1222901 - 77 183220571 - LEPBI_I1175 - hypothetical protein 1145 35.32 0 1222934..1224493 - 519 183220572 - LEPBI_I1176 - hypothetical protein 1146 37.84 0 1224516..1225136 + 206 183220573 - LEPBI_I1177 - hypothetical protein 1147 41.58 0 1225141..1225734 - 197 183220574 sirA LEPBI_I1178 - siroheme synthase 1148 47.11 +2 1225731..1226543 - 270 183220575 cobA1 LEPBI_I1179 - uroporphyrin-III C/tetrapyrrole methyltransferase 1149 38.72 0 1226690..1228453 + 587 183220576 cysJ LEPBI_I1180 - sulfite reductase [NADPH] flavoprotein alpha-component (SIR-FP) 1150 39.87 0 1228461..1230128 + 555 183220577 cysI LEPBI_I1181 - sulfite reductase [NADPH] hemoprotein beta-component (SIR-HP; SIRHP) 1151 41.93 0 1230329..1231561 - 410 183220578 cysN LEPBI_I1182 - ATP-sulfurylase, subunit 1 (ATP:sulfate adenylyltransferase) 1152 40.70 0 1231561..1232469 - 302 183220579 cysD LEPBI_I1183 - Sulfate adenylyltransferase subunit 2 1153 44.63 +1 1232476..1233201 - 241 183220580 cysH LEPBI_I1184 - 5'-adenylylsulfate reductase (APS reductase; cysH-like) 1154 43.29 +1 1233270..1234334 - 354 183220581 cysA LEPBI_I1185 - ABC-type transport sulfate/thiosulfate system, ATP-binding protein 1155 40.55 0 1234336..1235139 - 267 183220582 cysW LEPBI_I1186 - ABC-type transport sulfate protein, permease; putative signal peptide 1156 41.16 0 1235136..1235966 - 276 183220583 cysT LEPBI_I1187 - ABC-type transport sulfate system, permease; putative signal peptide 1157 39.21 0 1235967..1237004 - 345 183220584 sbp LEPBI_I1188 - ABC-type sulfate transport system, periplamic binding protein 1158 36.36 0 1237184..1238836 + 550 183220585 - LEPBI_I1189 - putative flagellar protein 1159 35.56 0 1238866..1239450 + 194 183220586 flgD LEPBI_I1190 - basal-body rod modification protein FlgD 1160 43.15 +1 1239489..1240883 + 464 183220587 flgE LEPBI_I1191 - flagellar hook protein FlgE 1161 36.27 0 1240980..1243325 + 781 183220588 - LEPBI_I1192 - hypothetical protein 1162 36.23 0 1243322..1244323 + 333 183220589 - LEPBI_I1193 - hypothetical protein 1163 36.07 0 1244375..1246348 + 657 183220590 - LEPBI_I1194 - hypothetical protein 1164 41.22 0 1246420..1247256 + 278 183220591 - LEPBI_I1195 - putative enoyl-(Acyl-carrier-protein) reductase 1165 39.51 0 1247260..1248651 - 463 183220592 murD LEPBI_I1196 - UDP-N-acetylmuramoylalanine--D-glutamate ligase 1166 36.34 0 1248712..1249044 + 110 183220593 - LEPBI_I1197 - putative anti-sigma factor antagonist 1167 38.22 0 1249054..1249830 + 258 183220594 trpC LEPBI_I1198 - indole-3-glycerol phosphate synthase (IGPS) 1168 35.53 0 1249924..1251606 + 560 183220595 - LEPBI_I1199 - putative two-component sensor; putative membrane protein 1169 34.81 0 1251629..1253863 - 744 183220596 - LEPBI_I1200 - putative signal transduction histidine kinase; putative membrane protein 1170 40.16 0 1256153..1256533 + 126 183220597 - LEPBI_I1203 - hypothetical protein 1171 36.25 0 1256625..1257242 - 205 183220598 - LEPBI_I1204 - hypothetical protein 1172 33.00 -1 1257441..1258337 - 298 183220599 - LEPBI_I1205 - putative integrase/recombinase 1173 36.46 0 1258410..1259687 - 425 183220600 - LEPBI_I1206 - ankyrin repeat-containing protein 1174 37.85 0 1259689..1261215 - 508 183220601 - LEPBI_I1207 - parallel beta-helix repeat-containing electron transport protein 1175 40.27 0 1261215..1262453 - 412 183220602 - LEPBI_I1208 - putative di-haem cytochrome c peroxidase 1176 38.18 0 1262652..1263002 - 116 183220603 - LEPBI_I1209 - hypothetical protein 1177 39.41 0 1263009..1263518 - 169 183220604 - LEPBI_I1210 - hypothetical protein 1178 37.48 0 1263610..1264284 + 224 183220605 - LEPBI_I1211 - hypothetical protein 1179 39.72 0 1264442..1264582 - 46 183220606 - LEPBI_I1212 - hypothetical protein 1180 37.34 0 1264804..1265751 - 315 183220607 - LEPBI_I1213 - hypothetical protein 1181 35.99 0 1266086..1266649 + 187 183220608 - LEPBI_I1214 - putative dihydrofolate reductase 1182 38.31 0 1266752..1267837 - 361 183220609 - LEPBI_I1215 - hypothetical protein 1183 35.58 0 1268344..1268610 + 88 183220610 - LEPBI_I1216 - putative transposase A 1184 34.46 -1 1268793..1269413 + 206 183220611 - LEPBI_I1217 - putative transposase B, catalytic region 1185 32.62 -1 1269429..1269992 - 187 183220612 - LEPBI_I1218 - putative two-component sensor histidine kinase 1186 32.76 -1 1270080..1271126 - 348 183220613 - LEPBI_I1219 - putative sensory transduction histidine kinase 1187 34.38 -1 1271822..1272013 + 63 183220614 - LEPBI_I1220 - hypothetical protein 1188 40.51 0 1272340..1273482 + 380 183220615 - LEPBI_I1221 - hypothetical protein 1189 35.08 0 1273489..1274805 - 438 183220616 - LEPBI_I1222 - putative transcriptional factor; putative membrane protein 1190 36.14 0 1274787..1275071 - 94 183220617 - LEPBI_I1223 - hypothetical protein 1191 35.94 0 1275178..1275369 - 63 183220618 - LEPBI_I1224 - hypothetical protein 1192 38.24 0 1275526..1277052 - 508 183220619 - LEPBI_I1225 - HD-GYP domain-containing protein 1193 28.57 -2 1277169..1277336 + 55 183220620 - LEPBI_I1226 - hypothetical protein 1194 39.02 0 1277387..1278706 + 439 183220621 - LEPBI_I1227 - hypothetical protein 1195 36.54 0 1278737..1279639 - 300 183220622 - LEPBI_I1228 - LysR family transcriptional regulator 1196 42.02 0 1279731..1281134 + 467 183220623 leuC1 LEPBI_I1229 - 3-isopropylmalate dehydratase large subunit 1197 40.35 0 1281131..1281757 + 208 183220624 leuD1 LEPBI_I1230 - 3-isopropylmalate dehydratase small subunit 1198 39.08 0 1281800..1282687 - 295 183220625 - LEPBI_I1231 - hypothetical protein 1199 35.07 0 1282807..1284360 - 517 183220626 - LEPBI_I1232 - putative methyl-accepting chemotaxis protein; putative membrane protein; putative signal peptide 1200 39.24 0 1284518..1285939 - 473 183220627 - LEPBI_I1233 - ankyrin repeat-containing protein 1201 35.68 0 1285947..1286372 - 141 183220628 - LEPBI_I1235 - hypothetical protein 1202 35.55 0 1286570..1287562 + 330 183220629 - LEPBI_I1236 - alpha/beta family hydrolase 1203 38.10 0 1287574..1287930 + 118 183220630 - LEPBI_I1237 - hypothetical protein 1204 34.15 -1 1287957..1289183 + 408 183220631 - LEPBI_I1238 - hypothetical protein 1205 38.83 0 1289592..1289882 + 96 183220632 - LEPBI_I1239 - hypothetical protein 1206 34.41 -1 1289971..1290525 - 184 183220633 - LEPBI_I1240 - putative dihydrofolate reductase 1207 41.87 0 1290819..1291181 - 120 183220634 - LEPBI_I1241 - ArsR family transcriptional regulator 1208 36.78 0 1291303..1291854 + 183 183220635 - LEPBI_I1242 - hypothetical protein 1209 39.00 0 1291961..1292401 - 146 183220636 - LEPBI_I1243 - hypothetical protein 1210 34.80 0 1292636..1293181 - 181 183220637 - LEPBI_I1244 - hypothetical protein 1211 36.06 0 1293187..1293699 - 170 183220638 - LEPBI_I1245 - hypothetical protein 1212 43.23 +1 1293734..1293925 - 63 183220639 - LEPBI_I1246 - hypothetical protein 1213 33.33 -1 1294046..1294372 - 108 183220640 - LEPBI_I1247 - hypothetical protein 1214 45.19 +1 1294714..1295295 + 193 183220641 - LEPBI_I1249 - hypothetical protein 1215 40.51 0 1295401..1295637 + 78 183220642 - LEPBI_I1250 - hypothetical protein 1216 37.01 0 1295698..1296594 + 298 183220643 - LEPBI_I1251 - hypothetical protein 1217 43.13 +1 1296863..1298128 + 421 183220644 - LEPBI_I1252 - putative signal peptide 1218 38.64 0 1298141..1298818 + 225 183220645 - LEPBI_I1253 - hypothetical protein 1219 41.46 0 1298904..1300466 + 520 183220646 - LEPBI_I1254 - HEAT-like repeat-containing protein 1220 38.45 0 1300556..1301083 - 175 183220647 - LEPBI_I1255 - hypothetical protein 1221 40.09 0 1301080..1302351 - 423 183220648 - LEPBI_I1256 - putative cobalt reductase 1222 40.00 0 1302357..1302491 + 44 183220649 - LEPBI_I1257 - hypothetical protein 1223 38.81 0 1302543..1304150 + 535 183220650 - LEPBI_I1258 - putative methyl-accepting chemotaxis protein; putative membrane protein 1224 43.00 +1 1304279..1306036 + 585 183220651 - LEPBI_I1259 - Acyl-CoA dehydrogenase family protein 1225 40.49 0 1306269..1307036 + 255 183220652 - LEPBI_I1260 - putative metal-dependent hydrolase 1226 40.24 0 1307090..1307842 + 250 183220653 - LEPBI_I1262 - hypothetical protein 1227 43.99 +1 1308116..1309222 + 368 183220654 - LEPBI_I1263 - hypothetical protein 1228 39.98 0 1309238..1310200 + 320 183220655 - LEPBI_I1264 - ABC-type transport system, periplasmic adhesin; putative signal peptide 1229 42.66 0 1310238..1310891 + 217 183220656 - LEPBI_I1265 - ABC-type transport system, ATPase 1230 41.40 0 1310884..1311738 + 284 183220657 - LEPBI_I1266 - ABC-type transport system, permease; putative membrane protein 38.82 MEAN 4.08 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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