version 1.0
Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome I, complete sequence - 1..3599677 3391 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 953 38.53 0 1012059..1013078 - 339 183220380 - LEPBI_I0976 - putative signal peptide 954 34.25 -1 1013089..1013523 + 144 183220381 - LEPBI_I0977 - hypothetical protein 955 37.33 0 1013520..1014095 + 191 183220382 - LEPBI_I0978 - hypothetical protein 956 38.67 0 1014066..1016012 - 648 183220383 prlC LEPBI_I0979 - oligopeptidase A 957 42.11 0 1016086..1016484 + 132 183220384 - LEPBI_I0980 - hypothetical protein 958 37.23 0 1016481..1017944 - 487 183220385 - LEPBI_I0981 - hypothetical protein 959 40.69 0 1018063..1019217 + 384 183220386 - LEPBI_I0982 - hypothetical protein 960 42.34 0 1019307..1020527 - 406 183220387 - LEPBI_I0983 - putative signal peptide 961 43.63 +1 1020531..1020734 - 67 183220388 - LEPBI_I0984 - hypothetical protein 962 44.34 +1 1020776..1021693 - 305 183220389 - LEPBI_I0985 - hypothetical protein 963 41.57 0 1021696..1022436 - 246 183220390 - LEPBI_I0986 - putative signal peptide 964 36.94 0 1022636..1024078 + 480 183220391 - LEPBI_I0987 - hypothetical protein 965 41.68 0 1024080..1025444 + 454 183220392 - LEPBI_I0988 - hypothetical protein 966 38.54 0 1025441..1025959 + 172 183220393 - LEPBI_I0989 - hypothetical protein 967 33.71 -1 1025956..1026480 + 174 183220394 - LEPBI_I0990 - hypothetical protein 968 32.03 -1 1026480..1027094 + 204 183220395 - LEPBI_I0991 - hypothetical protein 969 33.76 -1 1027091..1028488 + 465 183220396 - LEPBI_I0992 - putative RTX secretion protein D 970 34.31 -1 1028485..1031457 + 990 183220397 - LEPBI_I0993 - putative multidrug resistance protein; putative membrane protein 971 34.31 -1 1031461..1034130 + 889 183220398 - LEPBI_I0994 - putative multidrug protein; putative membrane protein 972 36.93 0 1034164..1040061 + 1965 183220399 - LEPBI_I0995 - hypothetical protein 973 30.69 -1 1040051..1040692 + 213 183220400 - LEPBI_I0996 - hypothetical protein 974 37.70 0 1040706..1042562 - 618 183220401 - LEPBI_I0997 - putative adenylate cyclase 975 40.16 0 1042559..1044535 - 658 183220402 - LEPBI_I0998 - hypothetical protein 976 35.44 0 1044540..1045868 - 442 183220403 - LEPBI_I0999 - putative lipid A core -O-antigen ligase; putative membrane protein 977 38.14 0 1045918..1047207 + 429 183220404 - LEPBI_I1000 - glycosyltransferase 978 38.35 0 1047204..1047821 + 205 183220405 - LEPBI_I1001 - hypothetical protein 979 36.48 0 1047808..1048857 - 349 183220406 - LEPBI_I1002 - putative signal peptide 980 41.19 0 1048900..1049955 - 351 183220407 - LEPBI_I1003 - putative lipopolysaccharide core biosynthesis glycosyl transferase RfaQ 981 40.22 0 1049952..1050575 - 207 183220408 - LEPBI_I1004 - hypothetical protein 982 43.14 +1 1050668..1051462 + 264 183220409 - LEPBI_I1005 - hypothetical protein 983 43.17 +1 1051467..1052717 - 416 183220410 glyA LEPBI_I1006 - Serine hydroxymethyltransferase (Serine methylase; SHMT) 984 40.69 0 1052714..1053583 - 289 183220411 - LEPBI_I1007 - putative lipoate-protein ligase A 985 42.91 +1 1053580..1054404 - 274 183220412 - LEPBI_I1008 - hypothetical protein 986 41.40 0 1054463..1055416 + 317 183220413 - LEPBI_I1009 - hypothetical protein 987 43.11 +1 1055416..1057839 + 807 183220414 - LEPBI_I1010 - putative penicillin-binding protein 1A 988 41.04 0 1058098..1058538 + 146 183220415 - LEPBI_I1011 - hypothetical protein 989 37.66 0 1058604..1059227 - 207 183220416 - LEPBI_I1012 - putative signal peptide 990 40.83 0 1059289..1060716 - 475 183220417 - LEPBI_I1013 - alginate O-acetyltransferase 991 41.84 0 1060737..1061735 - 332 183220418 sppA LEPBI_I1014 - signal peptide peptidase SppA 992 44.26 +1 1061791..1062687 + 298 183220419 - LEPBI_Ia1014 - hypothetical protein 993 36.67 0 1062748..1062957 + 69 183220420 - LEPBI_I1017 - hypothetical protein 994 38.10 0 1062908..1063768 - 286 183220421 - LEPBI_I1018 - hypothetical protein 995 46.41 +1 1063791..1064555 + 254 183220422 - LEPBI_I1019 - putative Rossmann fold nucleotide-binding protein 996 43.64 +1 1064574..1064864 + 96 183220423 rpmB LEPBI_I1020 - 50S ribosomal protein L28 997 46.11 +1 1064891..1065532 + 213 183220424 nth LEPBI_I1021 - endonuclease III (DNA-(apurinic or apyrimidinic site) lyase) 998 41.49 0 1065408..1066241 - 277 183220425 - LEPBI_I1022 - hypothetical protein 999 39.14 0 1066335..1067246 + 303 183220426 ubiA LEPBI_I1023 - 4-hydroxybenzoate polyprenyltransferase; putative membrane protein; putative signal peptide 1000 44.56 +1 1067243..1067839 + 198 183220427 ubiX LEPBI_I1024 - 3-octaprenyl-4-hydroxybenzoate carboxylyase 1001 45.93 +1 1067823..1068203 - 126 183220428 - LEPBI_I1025 - putative acyl-CoA thioester hydrolase (modular protein) 1002 45.55 +1 1068303..1069235 + 310 183220429 pyrB LEPBI_I1026 - aspartate carbamoyltransferase, catalytic subunit (aspartate transcarbamylase; ATCase) 1003 37.13 0 1069228..1069596 + 122 183220430 - LEPBI_I1027 - hypothetical protein 1004 44.91 +1 1069580..1070806 + 408 183220431 - LEPBI_I1028 - putative aspartate aminotransferase 1005 40.89 0 1070887..1071852 + 321 183220432 - LEPBI_I1029 - hypothetical protein 1006 42.61 0 1071854..1072489 + 211 183220433 - LEPBI_I1030 - hypothetical protein 1007 38.39 0 1072538..1073743 + 401 183220434 - LEPBI_I1031 - putative transcriptional regulator 1008 45.16 +1 1073886..1075289 + 467 183220435 rho LEPBI_I1032 - transcription termination factor Rho 1009 41.79 0 1075300..1075500 + 66 183220436 rpmE LEPBI_I1033 - 50S ribosomal protein L31 1010 44.65 +1 1075550..1076344 + 264 183220437 - LEPBI_I1034 - hypothetical protein 1011 38.62 0 1076341..1076529 + 62 183220438 - LEPBI_I1035 - hypothetical protein 1012 37.78 0 1076595..1076954 + 119 183220439 - LEPBI_I1036 - putative anti-sigma factor antagonist 1013 35.42 0 1076962..1077726 + 254 183220440 - LEPBI_I1037 - putative signal peptide 1014 42.60 0 1077715..1079397 - 560 183220441 - LEPBI_I1038 - hypothetical protein 1015 38.58 0 1079398..1080465 - 355 183220442 - LEPBI_I1039 - hypothetical protein 1016 41.37 0 1080462..1081295 - 277 183220443 - LEPBI_I1040 - putative rRNA methyltransferase 1017 43.85 +1 1081311..1082147 - 278 183220444 - LEPBI_I1041 - putative SAM dependent methyltransferase 1018 37.38 0 1082144..1084069 - 641 183220445 - LEPBI_I1042 - putative phosphoserine phosphatase RsbP; putative membrane protein; putative signal peptide 1019 40.39 0 1084118..1085407 - 429 183220446 gltA LEPBI_I1043 - citrate synthase 1020 40.26 0 1085476..1087743 - 755 183220447 slt LEPBI_I1044 - soluble lytic murein transglycosylase 1021 39.83 0 1087792..1088991 + 399 183220448 - LEPBI_I1045 - hypothetical protein 1022 40.57 0 1088993..1089766 + 257 183220449 - LEPBI_I1046 - hypothetical protein 1023 41.27 0 1089835..1090275 + 146 183220450 - LEPBI_I1047 - hypothetical protein 1024 47.09 +2 1090276..1091220 + 314 183220451 pdxA LEPBI_I1048 - 4-hydroxythreonine-4-phosphate dehydrogenase (4-(phosphohydroxy)-L-threonine dehydrogenase) 1025 38.77 0 1091217..1091639 + 140 183220452 - LEPBI_I1049 - hypothetical protein 1026 43.49 +1 1091655..1092776 + 373 183220453 - LEPBI_I1050 - putative pyridoxal-phosphate-dependent aminotransferase 1027 35.40 0 1092773..1093546 + 257 183220454 - LEPBI_I1051 - putative signal peptide 1028 44.07 +1 1093551..1093820 - 89 183220455 - LEPBI_I1052 - hypothetical protein 1029 40.37 0 1093897..1094223 - 108 183220456 - LEPBI_I1053 - putative lipoprotein 1030 40.57 0 1094220..1094537 - 105 183220457 - LEPBI_I1054 - hypothetical protein 1031 39.16 0 1094534..1095409 - 291 183220458 - LEPBI_I1055 - hypothetical protein 1032 42.80 0 1095576..1098344 - 922 183220459 sucA LEPBI_I1056 - 2-oxoglutarate dehydrogenase E1 component (Alpha-ketoglutarate dehydrogenase) 1033 47.76 +2 1098379..1099785 - 468 183220460 lpdA1 LEPBI_I1057 - dihydrolipoyl dehydrogenase 1034 47.69 +2 1099793..1101025 - 410 183220461 sucB LEPBI_I1058 - dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 1035 49.64 +2 1101160..1101717 + 185 183220462 - LEPBI_I1059 - putative acetyltransferase 1036 44.03 +1 1102031..1102348 - 105 183220463 - LEPBI_I1060 - hypothetical protein 1037 40.19 0 1102349..1102990 + 213 183220464 - LEPBI_I1061 - hypothetical protein 1038 39.64 0 1103047..1104807 - 586 183220465 - LEPBI_I1062 - putative sigma factor sigB regulation protein RsbU 1039 43.57 +1 1105003..1106409 + 468 183220466 aniA LEPBI_I1063 - copper-containing nitrite reductase (major outer membrane protein Pan 1) 1040 33.33 -1 1106409..1106492 + 27 183220467 - LEPBI_I1064 - hypothetical protein 1041 38.87 0 1106493..1107287 + 264 183220468 - LEPBI_I1065 - putative signal peptide 1042 37.50 0 1107284..1107907 + 207 183220469 - LEPBI_I1066 - putative protein involved in biogenesis of respiratory system; putative signal peptide 1043 41.83 0 1107971..1109029 + 352 183220470 - LEPBI_I1067 - hypothetical protein 1044 39.70 0 1109051..1109788 - 245 183220471 - LEPBI_I1068 - putative short chain dehydrogenase 1045 33.46 -1 1109790..1112213 - 807 183220472 - LEPBI_I1069 - putative two-component response regulator; putative membrane protein 1046 36.06 0 1112235..1113188 - 317 183220473 - LEPBI_I1070 - putative RNA polymerase sigma-70-like factor 1047 36.36 0 1113185..1114372 - 395 183220474 - LEPBI_I1071 - putative NAD(FAD)-dependent dehydrogenase 1048 38.04 0 1114474..1115727 + 417 183220475 - LEPBI_I1072 - hypothetical protein 1049 39.36 0 1115720..1117228 - 502 183220476 mqo LEPBI_I1073 - malate dehydrogenase FAD/NAD(P)-binding subunit 1050 38.92 0 1117299..1118498 + 399 183220477 - LEPBI_I1074 - putative membrane-bound phosphoesterase; putative membrane protein; putative signal peptide 1051 36.03 0 1118639..1120420 + 593 183220478 - LEPBI_I1075 - putative methyl-accepting chemotaxis protein (MCP); putative membrane protein 1052 32.34 -1 1123405..1126014 + 869 183220479 - LEPBI_I1078 - putative two-component hybrid sensor and regulator 38.82 MEAN 4.08 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0