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Lawsonia intracellularis PHE/MN1-00, complete genome - 1..1457619 1180 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 940 40.34 +1 1177061..1177531 + 156 94987385 rpsG LI0943 - 30S ribosomal protein S7 941 38.92 +1 1177547..1179622 + 691 94987386 fusA LI0944 - elongation factor G 942 31.87 0 1179650..1180744 - 364 94987387 - LI0945 - dienelactone hydrolase 943 36.17 0 1181886..1183754 + 622 94987388 gidA LI0946 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 944 32.18 0 1184004..1184525 + 173 94987389 - LI0947 - cell wall-associated hydrolases (invasion-associated proteins) 945 36.26 0 1184566..1185660 - 364 94987390 - LI0948 - glycosyltransferase 946 33.94 0 1185825..1186151 - 108 94987391 - LI0949 - hypothetical protein 947 31.23 -1 1186164..1187114 - 316 94987392 - LI0950 - branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 948 34.20 0 1187315..1188358 - 347 94987393 asd LI0951 - aspartate-semialdehyde dehydrogenase 949 29.40 -1 1189061..1189645 - 194 94987394 - LI0952 - hypothetical protein 950 36.40 0 1189772..1190455 - 227 94987395 ccmC LI0953 - ABC-type transport system involved in cytochrome c biogenesis, permease component 951 34.07 0 1190503..1191180 - 225 94987396 - LI0954 - ABC-type transport system involved in cytochrome c biogenesis, permease component 952 32.39 0 1191225..1191860 - 211 94987397 ccmA/ccmB LI0955 - ABC-type multidrug transport system, ATPase component 953 33.93 0 1191823..1193829 - 668 94987398 ccmF LI0956 - cytochrome c biogenesis factor 954 30.70 -1 1193968..1194384 - 138 94987399 b2503 LI0957 - hypothetical protein 955 33.81 0 1194473..1195519 - 348 94987400 yhdP LI0958 - hemolysin-like protein 956 37.42 0 1196267..1196584 + 105 94987401 rpsJ LI0959 - 30S ribosomal protein S10 957 38.39 +1 1196606..1197238 + 210 94987402 rplC LI0960 - 50S ribosomal protein L3 958 37.36 0 1197254..1197874 + 206 94987403 rplD LI0961 - 50S ribosomal protein L4 959 32.64 0 1197889..1198176 + 95 94987404 rplW LI0962 - 50S ribosomal protein L23 960 41.52 +2 1198179..1199009 + 276 94987405 rplB LI0963 - 50S ribosomal protein L2 961 35.82 0 1199018..1199299 + 93 94987406 rpsS LI0964 - 30S ribosomal protein S19 962 37.17 0 1199312..1199650 + 112 94987407 rplV LI0965 - 50S ribosomal protein L22 963 36.92 0 1199654..1200295 + 213 94987408 rpsC LI0966 - 30S ribosomal protein S3 964 39.37 +1 1200295..1200708 + 137 94987409 rplP LI0967 - 50S ribosomal protein L16 965 33.33 0 1200896..1201162 + 88 94987410 rpsQ LI0968 - 30S ribosomal protein S17 966 35.23 0 1201178..1201546 + 122 94987411 rplN LI0969 - 50S ribosomal protein L14 967 30.84 -1 1201555..1201875 + 106 94987412 rplX LI0970 - 50S ribosomal protein L24 968 32.96 0 1201885..1202424 + 179 94987413 rplE LI0971 - 50S ribosomal protein L5 969 32.81 0 1202656..1203036 + 126 94987414 rpsH LI0972 - 30S ribosomal protein S8 970 34.98 0 1203044..1203589 + 181 94987415 rplF LI0973 - 50S ribosomal protein L6 971 30.85 -1 1203602..1203964 + 120 94987416 rplR LI0974 - 50S ribosomal protein L18 972 41.06 +2 1203989..1204480 + 163 94987417 rpsE LI0975 - 30S ribosomal protein S5 973 36.89 0 1204661..1205110 + 149 94987418 rplO LI0976 - 50S ribosomal protein L15 974 33.56 0 1205122..1206429 + 435 94987419 secY LI0977 - preprotein translocase subunit SecY 975 35.93 0 1206433..1207203 + 256 94987420 map LI0978 - methionine aminopeptidase 976 37.94 +1 1207425..1207793 + 122 94987421 rpsM LI0979 - 30S ribosomal protein S13 977 40.51 +1 1207850..1208239 + 129 94987422 rpsK LI0980 - 30S ribosomal protein S11 978 37.96 +1 1208262..1208888 + 208 94987423 rpsD LI0981 - 30S ribosomal protein S4 979 36.11 0 1208901..1209944 + 347 94987424 rpoA LI0982 - DNA-directed RNA polymerase subunit alpha 980 34.12 0 1209934..1210314 + 126 94987425 rplQ LI0983 - ribosomal protein L17 981 34.96 0 1210609..1212024 + 471 94987426 xanB LI0984 - phosphomannose isomerase/GDP-mannose pyrophosphorylase 982 34.41 0 1212317..1213618 + 433 94987427 vc0389 LI0985 - putative Na+/H+ antiporter 983 32.86 0 1213908..1215167 + 419 94987428 hisS LI0986 - histidyl-tRNA synthetase 984 36.00 0 1215195..1216994 + 599 94987429 aspS LI0987 - aspartyl-tRNA synthetase 985 34.74 0 1217085..1218077 + 330 94987430 dppF LI0988 - oligopeptide ABC transporter ATP-binding protein 986 35.16 0 1218216..1218980 + 254 94987431 - LI0989 - 3-deoxy-manno-octulosonate cytidylyltransferase 987 34.39 0 1218980..1220110 + 376 94987432 carA LI0990 - carbamoyl phosphate synthase small subunit 988 34.18 0 1220290..1221117 + 275 94987433 - LI0991 - GluNAc transferase 989 30.61 -1 1221162..1221821 - 219 94987434 - LI0992 - hypothetical protein 990 35.79 0 1222274..1223455 + 393 94987435 acrA LI0993 - multidrug efflux membrane permease 991 36.19 0 1223455..1226604 + 1049 94987436 acrB LI0994 - acriflavin resistance protein D 992 36.96 0 1226608..1227987 + 459 94987437 oprM LI0995 - outer membrane efflux protein 993 35.21 0 1228358..1228783 + 141 94987438 - LI0996 - hypothetical protein 994 35.81 0 1228824..1230155 + 443 94987439 purB LI0997 - adenylosuccinate lyase 995 35.99 0 1230186..1230749 + 187 94987440 pyrE LI0998 - orotate phosphoribosyltransferase 996 34.44 0 1231102..1232007 + 301 94987441 - LI0999 - hypothetical protein 997 35.47 0 1232004..1232939 + 311 94987442 - LI1000 - hypothetical protein 998 37.53 0 1233552..1234028 + 158 94987443 napC LI1001 - cytochrome c nitrite reductase small subunit 999 36.29 0 1234021..1235574 + 517 94987444 nrfA LI1002 - chain A, cytochrome C nitrite reductase 1000 35.12 0 1235666..1236898 - 410 94987445 lysC LI1003 - aspartate kinase 1001 32.50 0 1236903..1237505 - 200 94987446 - LI1004 - ATPase or kinase 1002 37.90 +1 1237651..1238547 + 298 94987447 truB LI1005 - pseudouridine synthase 1003 36.41 0 1239053..1241263 + 736 94987448 pnpA LI1006 - polynucleotide phosphorylase/polyadenylase 1004 32.50 0 1241379..1242812 - 477 94987449 gatB LI1007 - aspartyl/glutamyl-tRNA amidotransferase subunit B 1005 31.14 -1 1242831..1243469 - 212 94987450 - LI1008 - hypothetical protein 1006 35.20 0 1244106..1244963 - 285 94987451 yfjB LI1009 - sugar kinase 1007 37.26 0 1245221..1245856 + 211 94987452 gmhA LI1010 - phosphoheptose isomerase 1008 36.02 0 1246200..1247129 + 309 94987453 hemC LI1011 - porphobilinogen deaminase 1009 34.19 0 1247217..1249670 + 817 94987454 lon LI1012 - ATP-dependent protease 1010 35.33 0 1249691..1250893 - 400 94987455 nar LI1013 - major facilitator superfamily permease 1011 31.47 0 1251229..1251711 + 160 94987456 - LI1014 - hypothetical protein 1012 36.86 0 1251726..1253258 + 510 94987457 gmpA LI1015 - phosphoglyceromutase 1013 30.85 -1 1253603..1253965 - 120 94987458 - LI1016 - hypothetical protein 1014 32.34 0 1253967..1254572 - 201 94987459 - LI1017 - hypothetical protein 1015 34.40 0 1254631..1256223 - 530 94987460 rfaQ LI1018 - ADP-heptose:LPS heptosyltransferase 1016 35.52 0 1256500..1257321 - 273 94987461 lpxA LI1019 - UDP-N-acetylglucosamine acyltransferase 1017 34.63 0 1257321..1257782 - 153 94987462 fabZ LI1020 - (3R)-hydroxymyristoyl-(acyl-carrier-protein) dehydratase 1018 34.41 0 1257792..1258817 - 341 94987463 lpxD LI1021 - UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 1019 34.94 0 1258821..1259381 - 186 94987464 - LI1022 - Outer membrane protein 1020 32.56 0 1259526..1261328 - 600 94987465 amiA LI1023 - N-acetylmuramoyl-L-alanine amidase 1021 34.12 0 1261471..1264125 - 884 94987466 - LI1024 - Outer membrane protein/protective antigen OMA87 1022 35.45 0 1264118..1264825 - 235 94987467 lolD LI1025 - ABC-type transport system, involved in lipoprotein release, permease component 1023 34.81 0 1264828..1266111 - 427 94987468 lolC LI1026 - ABC-type transport system, involved in lipoprotein release, permease component 1024 35.74 0 1266111..1267484 - 457 94987469 lysU LI1027 - lysyl-tRNA synthetase (class II) 1025 33.58 0 1268376..1269200 + 274 94987470 - LI1028 - phosphate-binding protein 1026 32.49 0 1269253..1270083 + 276 94987471 pstC LI1029 - phosphate transporter permease PstC 1027 33.45 0 1270080..1270970 + 296 94987472 pstA LI1030 - phosphate ABC transporter, permease protein 1028 30.75 -1 1270961..1271734 + 257 94987473 pstB LI1031 - phosphate ABC transporter ATP-binding protein 1029 38.16 +1 1271838..1272293 - 151 94987474 - LI1032 - hypothetical protein 1030 32.34 0 1272481..1273890 - 469 94987475 - LI1033 - hypothetical protein 1031 32.90 0 1274250..1275641 - 463 94987476 - LI1034 - hypothetical protein 1032 32.17 0 1276286..1277317 - 343 94987477 - LI1035 - hypothetical protein 1033 33.75 0 1277447..1278403 - 318 94987478 - LI1036 - hypothetical protein 1034 39.34 +1 1278568..1279566 - 332 94987479 - LI1037 - hypothetical protein 1035 25.47 -2 1279875..1280561 - 228 94987480 - LI1038 - hypothetical protein 1036 32.55 0 1281061..1282206 - 381 94987481 - LI1039 - hypothetical protein 1037 33.04 0 1282447..1283466 - 339 94987482 - LI1040 - hypothetical protein 1038 31.93 0 1283628..1284554 - 308 94987483 - LI1041 - hypothetical protein 1039 34.83 0 1285000..1286004 - 334 94987484 - LI1042 - hypothetical protein 34.48 MEAN 3.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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