version 1.0
Lawsonia intracellularis PHE/MN1-00, complete genome - 1..1457619 1180 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 871 36.88 0 1086267..1088042 + 591 94987316 - LI0874 - formate--tetrahydrofolate ligase 872 35.68 0 1088081..1088974 + 297 94987317 - LI0875 - methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase 873 32.66 0 1088986..1090329 - 447 94987318 - LI0876 - tRNA and rRNA cytosine-C5-methylases 874 35.15 0 1090388..1091761 - 457 94987319 atoC LI0877 - response regulator 875 32.57 0 1091827..1093269 - 480 94987320 atoS LI0878 - Signal transduction histidine kinase 876 35.81 0 1093271..1094605 - 444 94987321 pgi LI0879 - glucose-6-phosphate isomerase 877 33.59 0 1095072..1095860 + 262 94987322 sfsA LI0880 - DNA-binding protein, stimulates sugar fermentation 878 27.70 -2 1095872..1096972 - 366 94987323 - LI0881 - permease 879 32.47 0 1096969..1098123 - 384 94987324 - LI0882 - permease 880 35.93 0 1098346..1099038 - 230 94987325 - LI0883 - Zn-dependent hydrolase 881 32.14 0 1099356..1101281 - 641 94987326 selB LI0884 - selenocysteine-specific translation elongation factor 882 35.94 0 1101390..1102847 - 485 94987327 - LI0885 - Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases 883 29.23 -1 1102873..1103156 - 93 94987328 - LI0886 - glutamyl-tRNA (Gln) amidotransferase subunit C 884 33.54 0 1103384..1103869 - 161 94987329 - LI0887 - hypothetical protein 885 34.44 0 1104132..1104584 + 150 94987330 - LI0888 - universal stress protein UspA-like nucleotide-binding protein 886 31.28 -1 1105139..1105771 - 210 94987331 - LI0889 - hypothetical protein 887 33.01 0 1106149..1110171 - 1340 94987332 - LI0890 - hypothetical protein 888 32.28 0 1111143..1111616 + 157 94987333 - LI0891 - hypothetical protein 889 33.57 0 1111705..1113402 + 565 94987334 lnt LI0892 - apolipoprotein N-acyltransferase 890 36.27 0 1113451..1114539 + 362 94987335 - LI0893 - protein chain release factor B 891 37.32 0 1114982..1115257 + 91 94987336 himD LI0894 - nucleoid DNA-binding protein 892 34.63 0 1115585..1116430 + 281 94987337 dapF LI0895 - diaminopimelate epimerase 893 34.44 0 1116477..1117382 + 301 94987338 dapA LI0896 - dihydrodipicolinate synthase 894 33.42 0 1117584..1118747 + 387 94987339 araJ LI0897 - protein AraJ 895 34.23 0 1118929..1119711 + 260 94987340 tatD LI0898 - Mg-dependent DNase 896 31.62 0 1119740..1120381 - 213 94987341 - LI0899 - hypothetical protein 897 29.35 -1 1120638..1121039 + 133 94987342 - LI0900 - metal-dependent hydrolase 898 33.02 0 1121253..1121570 + 105 94987343 dsr LI0901 - sulfite reductase, dissimilatory-type gamma subunit 899 34.41 0 1121916..1122938 + 340 94987344 - LI0902 - outer membrane protein 900 28.66 -1 1122971..1123441 + 156 94987345 - LI0903 - hypothetical protein 901 36.96 0 1123545..1127711 - 1388 94987346 rpoB LI0904 - DNA-directed RNA polymerase, beta subunit/140 kD subunit 902 37.72 +1 1127787..1131908 - 1373 94987347 rpoB LI0905 - DNA-directed RNA polymerase subunit beta 903 35.42 0 1132246..1133538 - 430 94987348 hemL LI0906 - glutamate-1-semialdehyde aminotransferase 904 34.93 0 1133538..1134038 - 166 94987349 nirH LI0907 - transcriptional regulators 905 36.08 0 1134626..1135717 + 363 94987350 hypD LI0908 - hydrogenase maturation factor 906 34.49 0 1136500..1137279 - 259 94987351 lgt LI0909 - prolipoprotein diacylglyceryltransferase 907 33.19 0 1137481..1138158 - 225 94987352 cmk LI0910 - cytidylate kinase 908 32.44 0 1138388..1139284 - 298 94987353 - LI0911 - hypothetical protein 909 38.28 +1 1139678..1141579 + 633 94987354 dnaK LI0912 - molecular chaperone dnaK 910 34.11 0 1141712..1143127 - 471 94987355 aspA LI0913 - aspartate ammonia-lyase 911 33.67 0 1143320..1144207 - 295 94987356 dacC LI0914 - D-alanyl-D-alanine carboxypeptidase 912 34.31 0 1144573..1145496 + 307 94987357 livE LI0915 - branched-chain amino acid aminotransferase 913 32.23 0 1145527..1147251 + 574 94987358 dnaX LI0916 - DNA polymerase III, gamma/tau subunits 914 33.65 0 1147270..1147581 + 103 94987359 - LI0917 - hypothetical protein 915 35.62 0 1147646..1148257 + 203 94987360 recR LI0918 - recombinational DNA repair protein 916 30.46 -1 1148418..1149008 - 196 94987361 - LI0919 - helicase family protein 917 35.44 0 1149173..1150072 - 299 94987362 - LI0920 - membrane proteins related to metalloendopeptidases 918 35.90 0 1150886..1152172 + 428 94987363 purD LI0921 - phosphoribosylamine--glycine ligase 919 37.21 0 1152159..1152674 + 171 94987364 purK LI0922 - phosphoribosylcarboxyaminoimidazole (NCAIR) mutase 920 32.23 0 1152735..1153367 + 210 94987365 lepB LI0923 - Signal peptidase I 921 35.20 0 1153381..1153701 - 106 94987366 qacE LI0924 - membrane transporters of cations and cationic drugs 922 34.66 0 1153732..1154109 - 125 94987367 qacE LI0925 - membrane transporters of cations and cationic drugs 923 33.28 0 1154151..1156142 - 663 94987368 mdoB LI0926 - hypothetical protein 924 32.94 0 1156205..1157719 - 504 94987369 mviN LI0927 - uncharacterized membrane protein, putative virulence factor 925 35.75 0 1157845..1158960 + 371 94987370 tgt LI0928 - queuine/archaeosine tRNA-ribosyltransferase 926 30.98 -1 1159064..1160209 - 381 94987371 - LI0929 - cell wall biosynthesis glycosyltransferase 927 36.95 0 1160320..1160706 - 128 94987372 rplL LI0930 - 50S ribosomal protein L7/L12 928 37.19 0 1160754..1161272 - 172 94987373 rplJ LI0931 - 50S ribosomal protein L10 929 37.29 0 1161433..1162140 - 235 94987374 rplA LI0932 - 50S ribosomal protein L1 930 34.28 0 1162245..1162667 - 140 94987375 rplK LI0933 - 50S ribosomal protein L11 931 39.66 +1 1162747..1163331 - 194 94987376 nusG LI0934 - transcription antiterminator 932 39.70 +1 1163863..1165056 - 397 94987377 tufA LI0935 - elongation factor Tu 933 33.59 0 1165638..1168367 - 909 94987378 pqqL LI0936 - Zn-dependent peptidase 934 38.18 +1 1168519..1169796 + 425 94987379 thiC LI0937 - thiamine biosynthesis protein ThiC 935 34.69 0 1169954..1171351 - 465 94987380 purF LI0938 - glutamine phosphoribosylpyrophosphate amidotransferase 936 36.30 0 1171427..1174657 - 1076 94987381 carB LI0939 - carbamoylphosphate synthase large subunit (split gene in MJ) 937 34.99 0 1174801..1175283 + 160 94987382 yqiE LI0940 - ADP-ribose pyrophosphatase 938 35.21 0 1175531..1176382 + 283 94987383 corC LI0941 - Mg2+/Co2+ transporter 939 43.55 +2 1176552..1176923 + 123 94987384 rpsL LI0942 - 30S ribosomal protein S12 940 40.34 +1 1177061..1177531 + 156 94987385 rpsG LI0943 - 30S ribosomal protein S7 941 38.92 +1 1177547..1179622 + 691 94987386 fusA LI0944 - elongation factor G 942 31.87 0 1179650..1180744 - 364 94987387 - LI0945 - dienelactone hydrolase 943 36.17 0 1181886..1183754 + 622 94987388 gidA LI0946 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 944 32.18 0 1184004..1184525 + 173 94987389 - LI0947 - cell wall-associated hydrolases (invasion-associated proteins) 945 36.26 0 1184566..1185660 - 364 94987390 - LI0948 - glycosyltransferase 946 33.94 0 1185825..1186151 - 108 94987391 - LI0949 - hypothetical protein 947 31.23 -1 1186164..1187114 - 316 94987392 - LI0950 - branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 948 34.20 0 1187315..1188358 - 347 94987393 asd LI0951 - aspartate-semialdehyde dehydrogenase 949 29.40 -1 1189061..1189645 - 194 94987394 - LI0952 - hypothetical protein 950 36.40 0 1189772..1190455 - 227 94987395 ccmC LI0953 - ABC-type transport system involved in cytochrome c biogenesis, permease component 951 34.07 0 1190503..1191180 - 225 94987396 - LI0954 - ABC-type transport system involved in cytochrome c biogenesis, permease component 952 32.39 0 1191225..1191860 - 211 94987397 ccmA/ccmB LI0955 - ABC-type multidrug transport system, ATPase component 953 33.93 0 1191823..1193829 - 668 94987398 ccmF LI0956 - cytochrome c biogenesis factor 954 30.70 -1 1193968..1194384 - 138 94987399 b2503 LI0957 - hypothetical protein 955 33.81 0 1194473..1195519 - 348 94987400 yhdP LI0958 - hemolysin-like protein 956 37.42 0 1196267..1196584 + 105 94987401 rpsJ LI0959 - 30S ribosomal protein S10 957 38.39 +1 1196606..1197238 + 210 94987402 rplC LI0960 - 50S ribosomal protein L3 958 37.36 0 1197254..1197874 + 206 94987403 rplD LI0961 - 50S ribosomal protein L4 959 32.64 0 1197889..1198176 + 95 94987404 rplW LI0962 - 50S ribosomal protein L23 960 41.52 +2 1198179..1199009 + 276 94987405 rplB LI0963 - 50S ribosomal protein L2 961 35.82 0 1199018..1199299 + 93 94987406 rpsS LI0964 - 30S ribosomal protein S19 962 37.17 0 1199312..1199650 + 112 94987407 rplV LI0965 - 50S ribosomal protein L22 963 36.92 0 1199654..1200295 + 213 94987408 rpsC LI0966 - 30S ribosomal protein S3 964 39.37 +1 1200295..1200708 + 137 94987409 rplP LI0967 - 50S ribosomal protein L16 965 33.33 0 1200896..1201162 + 88 94987410 rpsQ LI0968 - 30S ribosomal protein S17 966 35.23 0 1201178..1201546 + 122 94987411 rplN LI0969 - 50S ribosomal protein L14 967 30.84 -1 1201555..1201875 + 106 94987412 rplX LI0970 - 50S ribosomal protein L24 968 32.96 0 1201885..1202424 + 179 94987413 rplE LI0971 - 50S ribosomal protein L5 969 32.81 0 1202656..1203036 + 126 94987414 rpsH LI0972 - 30S ribosomal protein S8 970 34.98 0 1203044..1203589 + 181 94987415 rplF LI0973 - 50S ribosomal protein L6 34.48 MEAN 3.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0