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Lawsonia intracellularis PHE/MN1-00, complete genome - 1..1457619 1180 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 732 33.55 0 919170..920087 + 305 94987177 ychB LI0735 - 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase 733 38.20 +1 920202..921167 + 321 94987178 prsA LI0736 - phosphoribosylpyrophosphate synthetase 734 33.50 0 921211..921804 + 197 94987179 - LI0737 - 50S ribosomal protein L25/general stress protein Ctc 735 33.99 0 921880..922485 + 201 94987180 - LI0738 - peptidyl-tRNA hydrolase 736 28.43 -1 922741..923433 + 230 94987181 - LI0739 - hypothetical protein 737 36.73 0 923583..924377 + 264 94987182 flgF LI0740 - flagellar basal body rod protein 738 39.44 +1 924392..925177 + 261 94987183 flgG LI0741 - flagellar basal body rod protein FlgG 739 35.67 0 925203..926186 + 327 94987184 - LI0742 - hypothetical protein 740 37.52 0 926204..926896 + 230 94987185 flgH LI0743 - flagellar basal body L-ring protein 741 38.42 +1 926942..928081 + 379 94987186 flgI LI0744 - flagellar basal body P-ring protein 742 33.04 0 928086..928769 + 227 94987187 flgJ LI0745 - membrane proteins related to metalloendopeptidases 743 34.46 0 928976..929506 + 176 94987188 - LI0746 - hypothetical protein 744 36.40 0 929506..931623 + 705 94987189 flgK LI0747 - flagellar hook-associated protein 745 37.39 0 931633..933210 + 525 94987190 flgL LI0748 - flagellin-like protein 746 32.17 0 933304..933993 + 229 94987191 - LI0749 - flagellar assembly protein FliW 747 35.86 0 934221..935801 + 526 94987192 - LI0750 - hypothetical protein 748 38.43 +1 935839..937368 - 509 94987193 - LI0751 - Mg chelatase-related protein 749 33.63 0 937365..939059 - 564 94987194 - LI0752 - Sulfate transporter family protein 750 35.50 0 939166..939858 - 230 94987195 glnP LI0753 - ABC-type amino acid transport system, permease component 751 33.07 0 939981..940730 - 249 94987196 glnH LI0754 - amino acid ABC transporter periplasmic protein 752 36.70 0 941271..942995 - 574 94987197 rpsA LI0755 - 30S ribosomal protein S1 753 37.24 0 943310..943795 - 161 94987198 rnh LI0756 - ribonuclease HI 754 31.43 0 943971..944864 - 297 94987199 menA LI0757 - hypothetical protein 755 33.65 0 944976..945602 - 208 94987200 - LI0758 - hypothetical protein 756 34.32 0 945599..946513 - 304 94987201 menA LI0759 - hypothetical protein 757 37.00 0 946612..947238 - 208 94987202 tmk LI0760 - thymidylate kinase 758 33.71 0 947223..948281 - 352 94987203 cbf1 LI0761 - HD-superfamily hydrolase 759 34.66 0 948405..949160 + 251 94987204 surE LI0762 - acid phosphatase 760 37.23 0 949353..950276 + 307 94987205 fba LI0763 - fructose/tagatose bisphosphate aldolase 761 36.63 0 950386..951387 + 333 94987206 gapA LI0764 - glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 762 33.11 0 951412..952311 - 299 94987207 - LI0765 - hypothetical protein 763 36.33 0 952368..953336 - 322 94987208 fmt LI0766 - methionyl-tRNA formyltransferase 764 32.75 0 953333..953848 - 171 94987209 def LI0767 - N-formylmethionyl-tRNA deformylase 765 34.64 0 954008..955000 + 330 94987210 nifr3 LI0768 - tRNA-dihydrouridine synthase 766 36.52 0 955017..955769 - 250 94987211 - LI0769 - hypothetical protein 767 37.63 +1 955760..956341 - 193 94987212 - LI0770 - 5-formyltetrahydrofolate cyclo-ligase 768 34.68 0 957340..959340 + 666 94987213 rne LI0771 - ribonucleases G and E 769 33.84 0 959344..959937 + 197 94987214 - LI0772 - hypothetical protein 770 36.77 0 959970..961946 - 658 94987215 kefC LI0773 - Kef-type K+ transport systems, membrane components 771 33.26 0 962215..963630 + 471 94987216 trkA LI0774 - potassium transporter peripheral membrane component 772 33.67 0 963721..965187 + 488 94987217 trkH LI0775 - Trk-type K+ transport systems, membrane components 773 34.99 0 965279..965941 + 220 94987218 psd LI0776 - phosphatidylserine decarboxylase 774 30.80 -1 966003..966752 + 249 94987219 - LI0777 - phosphatidylserine synthase 775 33.64 0 966810..967460 - 216 94987220 nth LI0778 - endonuclease III, putative 776 33.64 0 967580..967900 + 106 94987221 cutA LI0779 - divalent cation tolerance protein, 777 33.12 0 967901..968842 + 313 94987222 fruK LI0780 - ribokinase family sugar kinase 778 32.41 0 969129..970853 + 574 94987223 - LI0781 - 5-enolpyruvylshikimate-3-phosphate synthase 779 34.29 0 970873..971706 + 277 94987224 thiD LI0782 - hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 780 31.00 -1 972160..972975 - 271 94987225 - LI0783 - hypothetical protein 781 35.69 0 973029..975491 - 820 94987226 gyrA LI0784 - Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 782 33.58 0 975610..978009 - 799 94987227 gyrB LI0785 - Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit 783 31.08 -1 978042..979193 - 383 94987228 dnaN LI0786 - DNA polymerase sliding clamp subunit (PCNA homolog) 784 30.08 -1 979314..980636 - 440 94987229 dnaA LI0787 - ATPase involved in DNA replication initiation 785 30.34 -1 980888..982222 + 444 94987230 - LI0788 - membrane proteins related to metalloendopeptidases 786 32.88 0 982255..983355 + 366 94987231 queA LI0789 - S-adenosylmethionine:tRNA-ribosyltransferase- isomerase (queuine synthetase) 787 37.29 0 984330..985391 + 353 94987232 vorB LI0790 - 2-ketoisovalerate ferredoxin reductase 788 37.94 +1 985391..986194 + 267 94987233 porB LI0791 - ferredoxin oxidoreductases, beta subunit 789 36.46 0 986196..986738 + 180 94987234 porB LI0792 - ferredoxin oxidoreductases, gamma subunit 790 33.10 0 987288..988580 + 430 94987235 - LI0793 - FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) 791 36.03 0 988737..989366 + 209 94987236 clpP LI0794 - protease subunit of ATP-dependent Clp proteases 792 36.20 0 989642..990895 + 417 94987237 clpX LI0795 - ATP-dependent protease ATP-binding subunit 793 35.90 0 990983..993436 + 817 94987238 lon LI0796 - ATP-dependent protease 794 33.59 0 993461..993847 - 128 94987239 - LI0797 - hypothetical protein 795 33.54 0 994282..995271 + 329 94987240 - LI0798 - hypothetical protein 796 32.24 0 995278..995916 - 212 94987241 - LI0799 - hypothetical protein 797 36.54 0 995965..996681 - 238 94987242 - LI0800 - hypothetical protein 798 32.24 0 996842..998215 + 457 94987243 glmU LI0801 - N-acetylglucosamine-1-phosphate uridyltransferase 799 37.04 0 999188..1000750 + 520 94987244 - LI0802 - HD superfamily hydrolase 800 33.33 0 1000833..1001591 + 252 94987245 - LI0803 - hypothetical protein 801 37.47 0 1001682..1002140 - 152 94987246 - LI0804 - hypothetical protein 802 35.10 0 1002133..1002810 - 225 94987247 - LI0805 - hypothetical protein 803 30.67 -1 1002865..1003953 - 362 94987248 menE LI0806 - O-succinylbenzoic acid--CoA ligase 804 35.64 0 1004052..1004873 - 273 94987249 menB LI0807 - naphthoate synthase 805 32.87 0 1004883..1005317 - 144 94987250 comA LI0808 - putative hydrolase, haloacid dehalogenase-like hydrolase 806 32.05 0 1005673..1006062 - 129 94987251 - LI0809 - hypothetical protein 807 33.61 0 1006385..1007098 + 237 94987252 - LI0810 - integral membrane protein, interacts with FtsH 808 34.72 0 1007157..1008167 - 336 94987253 pit LI0811 - phosphate/sulphate permeases 809 27.83 -2 1008160..1008795 - 211 94987254 - LI0812 - hypothetical protein 810 33.52 0 1010184..1011809 + 541 94987255 rluD LI0813 - pseudouridylate synthases, 23S RNA-specific 811 35.37 0 1012019..1012804 + 261 94987256 soj LI0814 - ATPases involved in chromosome partitioning 812 35.73 0 1012884..1013843 + 319 94987257 spo0J LI0815 - transcriptional regulator 813 35.45 0 1013959..1014996 + 345 94987258 - LI0816 - ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase 814 28.48 -1 1015004..1016197 - 397 94987259 hemN LI0817 - coproporphyrinogen III oxidase-like protein 815 34.18 0 1016534..1017481 + 315 94987260 pyrB LI0818 - aspartate carbamoyltransferase catalytic subunit 816 36.64 0 1017493..1018764 + 423 94987261 pyrC LI0819 - dihydroorotase-like protein 817 34.37 0 1018869..1019642 - 257 94987262 - LI0820 - 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 818 33.19 0 1019930..1021303 + 457 94987263 miaB LI0821 - 2-methylthioadenine synthetase 819 31.43 0 1021458..1022141 + 227 94987264 - LI0822 - PHP family histidinol phosphatase/hydrolase 820 35.90 0 1022176..1023267 + 363 94987265 pepQ LI0823 - Xaa-Pro aminopeptidase 821 33.71 0 1023291..1024349 + 352 94987266 - LI0824 - glycosyltransferase 822 33.57 0 1024378..1025664 + 428 94987267 - LI0825 - Lipid A core-O-antigen ligase and related enzymes 823 35.24 0 1025679..1025888 - 69 94987268 rpmB LI0826 - 50S ribosomal protein L28 824 35.47 0 1026067..1028082 + 671 94987269 - LI0827 - lipoprotein 825 38.20 +1 1028105..1029172 - 355 94987270 gpsA LI0828 - glycerol-3-phosphate dehydrogenase 826 36.59 0 1029763..1030869 + 368 94987271 potA LI0829 - putrescine/spermidine ABC transporter ATPase protein 827 32.32 0 1030856..1031740 + 294 94987272 potB LI0830 - ABC-type spermidine/putrescine transport system, permease component I 828 32.95 0 1031740..1032516 + 258 94987273 potC LI0831 - spermidine/putrescine ABC transporter membrane protein 829 31.53 0 1032574..1033626 + 350 94987274 potD LI0832 - spermidine/putrescine-binding periplasmic protein 830 37.43 0 1033802..1035070 - 422 94987275 - LI0833 - hypothetical protein 831 32.66 0 1035090..1035533 - 147 94987276 - LI0834 - hypothetical protein 34.48 MEAN 3.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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