version 1.0
Lawsonia intracellularis PHE/MN1-00, complete genome - 1..1457619 1180 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 396 39.37 +1 490077..490424 + 115 94986841 - LI0397 - integral membrane protein CcmA involved in cell shape determination 397 28.13 -2 490519..490941 + 140 94986842 - LI0398 - F0F1-type ATP synthase, subunit b 398 29.02 -1 490959..491537 + 192 94986843 atpF LI0399 - F0F1-type ATP synthase, subunit b 399 31.92 0 491534..492100 + 188 94986844 atpE LI0400 - F0F1 ATP synthase subunit delta 400 38.46 +1 492090..493610 + 506 94986845 atpD LI0401 - F0F1 ATP synthase subunit alpha 401 32.53 0 493615..494484 + 289 94986846 atpC LI0402 - F0F1 ATP synthase subunit gamma 402 38.35 +1 494508..495923 + 471 94986847 atpB LI0403 - F0F1 ATP synthase subunit beta 403 37.81 +1 495934..496335 + 133 94986848 atpA LI0404 - F0F1 ATP synthase subunit epsilon 404 31.88 0 496471..497913 + 480 94986849 xseA LI0405 - exonuclease VII, large subunit 405 36.44 0 497938..498807 + 289 94986850 - LI0406 - membrane proteins related to metalloendopeptidases 406 34.66 0 499089..499991 + 300 94986851 - LI0407 - geranylgeranyl pyrophosphate synthase 407 37.46 0 500065..501978 + 637 94986852 dsx LI0408 - 1-deoxy-D-xylulose-5-phosphate synthase 408 33.82 0 502001..503026 - 341 94986853 - LI0409 - ATPase 409 39.10 +1 504438..505217 - 259 94986854 trpA LI0410 - bifunctional tryptophan synthase TRPB 410 41.71 +2 505228..506397 - 389 94986855 trpB LI0411 - tryptophan synthase subunit beta 411 35.11 0 506387..507004 - 205 94986856 trpF LI0412 - phosphoribosyl anthranilate isomerase 412 34.44 0 506982..507704 - 240 94986857 trpC_2 LI0413 - indole-3-glycerol phosphate synthase protein 413 35.97 0 507758..508744 - 328 94986858 trpD LI0414 - anthranilate phosphoribosyltransferase 414 35.62 0 508741..509877 - 378 94986859 - LI0415 - kynureninase (kyurenine hydrolase) 415 38.46 +1 509880..510698 - 272 94986860 - LI0416 - ABC transporter permease 416 35.37 0 510688..511422 - 244 94986861 - LI0417 - ABC transporter ATP-binding protein 417 37.96 +1 511426..512397 - 323 94986862 - LI0418 - hypothetical protein 418 30.26 -1 514084..514919 + 277 94986863 - LI0419 - short chain dehydrogenase, putative 419 33.02 0 514967..515935 - 322 94986864 bioB LI0420 - biotin synthase 420 33.60 0 515952..517097 + 381 94986865 bioF LI0421 - 7-keto-8-aminopelargonate synthetase and related enzymes 421 27.54 -2 517094..517732 + 212 94986866 - LI0422 - hypothetical protein 422 28.49 -1 517752..518495 + 247 94986867 bioC LI0424 - ubiE/COQ5 methyltransferase family protein 423 32.03 0 518495..519106 + 203 94986868 bioD LI0425 - dethiobiotin synthetase 424 32.32 0 519110..520387 + 425 94986869 bioA LI0426 - adenosylmethionine-8-amino-7-oxononanoate aminotransferase 425 27.43 -2 520457..521032 - 191 94986870 - LI0427 - hypothetical protein 426 35.09 0 522545..523912 + 455 94986871 putP LI0428 - sodium-dependent transporter 427 34.73 0 524004..525074 - 356 94986872 hemN LI0429 - coproporphyrinogen III oxidase-like protein 428 31.52 0 525142..525582 + 146 94986873 - LI0430 - histidine triad nucleotide-binding protein 429 27.84 -2 525657..525947 + 96 94986874 himA LI0431 - nucleoid DNA-binding protein 430 32.72 0 526092..526742 - 216 94986875 - LI0432 - S-adenosylmethionine-dependent methyltransferase involved in cell division 431 34.91 0 527009..528847 - 612 94986876 dsbD LI0433 - hypothetical protein 432 31.49 0 529148..530338 - 396 94986877 - LI0434 - glycosyltransferase 433 34.96 0 530484..531716 + 410 94986878 aspC LI0435 - L,L-diaminopimelate aminotransferase 434 32.39 0 531796..532644 - 282 94986879 - LI0436 - PhyA2 435 35.14 0 532566..533117 - 183 94986880 - LI0437 - histidine acid phosphatase 436 33.79 0 533368..534693 - 441 94986881 - LI0438 - PhyA2 437 40.81 +2 535099..536355 + 418 94986882 hyaA LI0439 - hydrogenase-1 small subunit 438 37.76 +1 536370..538178 + 602 94986883 hyaB LI0440 - hydrogenase-1 large subunit 439 34.18 0 538288..538992 + 234 94986884 hyaC LI0441 - Ni/Fe-hydrogenase 1 B-type cytochrome subunit 440 33.15 0 538995..539531 + 178 94986885 hyaD LI0442 - processing of HyaA and HyaB proteins 441 28.40 -1 540291..540695 + 134 94986886 - LI0443 - hypothetical protein 442 36.41 0 540700..541770 + 356 94986887 - LI0444 - glycosyltransferase 443 33.55 0 541891..542361 - 156 94986888 dtd LI0445 - D-tyrosyl-tRNA deacylase 444 35.83 0 542402..543601 - 399 94986889 - LI0446 - 4-diphosphocytidyl-2-methyl-D-erithritol synthase 445 46.26 +2 543696..543989 + 97 94986890 - LI0447 - hypothetical protein 446 36.86 0 544048..544812 - 254 94986891 - LI0448 - hypothetical protein 447 35.59 0 544847..545644 - 265 94986892 - LI0449 - hypothetical protein 448 37.45 0 545767..546591 - 274 94986893 purL LI0450 - phosphoribosylformylglycinamidine synthase domain-containing protein 449 35.75 0 546832..548484 + 550 94986894 pyrG LI0451 - CTP synthetase 450 38.41 +1 548515..549321 + 268 94986895 kdsA LI0452 - 2-dehydro-3-deoxyphosphooctonate aldolase 451 34.31 0 549318..549929 + 203 94986896 - LI0453 - HAD superfamily low specificity phosphatase 452 33.15 0 550004..550549 + 181 94986897 - LI0454 - hypothetical protein 453 29.82 -1 550649..551218 + 189 94986898 - LI0455 - hypothetical protein 454 33.89 0 551218..551940 + 240 94986899 - LI0456 - ABC transporter ATPase 455 35.65 0 552086..553507 + 473 94986900 rpoN LI0457 - DNA-directed RNA polymerase specialized sigma subunit, sigma54-like protein 456 33.15 0 553542..554078 + 178 94986901 - LI0458 - ribosome-associated protein Y (PSrp-1) 457 33.44 0 554113..555078 + 321 94986902 - LI0459 - hypothetical protein 458 34.06 0 555553..556104 + 183 94986903 - LI0460 - putative outer membrane protein 459 36.94 0 556323..557819 - 498 94986904 - LI0461 - hypothetical protein 460 35.91 0 557976..559373 - 465 94986905 gltX LI0462 - glutamyl-and glutaminyl-tRNA synthetases 461 33.33 0 559477..560727 - 416 94986906 - LI0463 - hypothetical protein 462 37.96 +1 560781..562121 - 446 94986907 pgk LI0464 - phosphoglycerate kinase 463 31.07 -1 562525..563409 + 294 94986908 - LI0465 - hypothetical protein 464 37.16 0 563439..564431 - 330 94986909 galE LI0466 - nucleoside-diphosphate-sugar epimerases 465 32.43 0 564532..565308 - 258 94986910 cynT LI0467 - carbonic anhydrase 466 33.85 0 566233..567591 + 452 94986911 rfbB LI0468 - dTDP-D-glucose 4,6-dehydratase 467 34.40 0 567584..569458 + 624 94986912 - LI0469 - hypothetical protein 468 35.45 0 569852..570466 + 204 94986913 - LI0470 - membrane proteins related to metalloendopeptidases 469 32.52 0 570504..571607 + 367 94986914 - LI0471 - xylanase/chitin deacetylase 470 34.58 0 571638..572678 - 346 94986915 - LI0472 - permease 471 35.26 0 573983..577249 - 1088 94986916 - LI0473 - putative DNA methylase protein 472 34.57 0 579345..579749 - 134 94986917 - LI0474 - tellurite resistance 473 37.84 +1 579945..580343 - 132 94986918 - LI0475 - hypothetical protein 474 35.70 0 581215..583965 + 916 94986919 nrdA LI0476 - ribonucleotide-diphosphate reductase subunit alpha 475 33.23 0 584106..585107 + 333 94986920 nrdB LI0477 - ribonucleotide reductase, beta subunit 476 36.12 0 585484..586632 - 382 94986921 - LI0478 - cytosine deaminase-like protein 477 32.64 0 587222..588658 + 478 94986922 - LI0479 - alginate O-acetylation protein 478 33.03 0 588676..590637 + 653 94986923 - LI0480 - esterase MesA 479 33.07 0 590701..591078 + 125 94986924 - LI0481 - hypothetical protein 480 35.69 0 591277..592125 + 282 94986925 motA LI0482 - flagellar motor protein MotA 481 39.22 +1 592170..592883 + 237 94986926 motB LI0483 - flagellar motor protein 482 32.34 0 592910..594616 - 568 94986927 - LI0484 - hypothetical protein 483 34.37 0 594907..596061 - 384 94986928 - LI0485 - major facilitator superfamily permease 484 33.60 0 596408..597160 + 250 94986929 motA LI0486 - flagellar motor component 485 38.00 +1 597267..597887 + 206 94986930 motB LI0487 - flagellar motor protein 486 36.72 0 598269..599687 + 472 94986931 accC LI0488 - biotin carboxylase 487 36.98 0 599700..601946 + 748 94986932 - LI0489 - Acetyl-CoA carboxylase alpha subunit 488 34.56 0 601994..602644 + 216 94986933 - LI0490 - hypothetical protein 489 34.49 0 602649..602993 + 114 94986934 - LI0491 - hypothetical protein 490 35.75 0 603031..603486 + 151 94986935 - LI0492 - single-stranded DNA-binding protein 491 34.86 0 603604..605301 - 565 94986936 glnS LI0493 - glutaminyl-tRNA synthetase 492 34.13 0 605340..605717 - 125 94986937 - LI0494 - hypothetical protein 493 34.65 0 605999..607135 + 378 94986938 - LI0495 - glycosyltransferase 494 34.91 0 607449..608588 + 379 94986939 - LI0496 - branched chain amino acid ABC transporter, periplasmic amino acid-binding protein 495 35.35 0 608669..609562 + 297 94986940 livH LI0497 - branched chain amino acid ABC transporter, permease protein 34.48 MEAN 3.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0