version 1.0
Lawsonia intracellularis PHE/MN1-00, complete genome - 1..1457619 1180 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 356 35.75 0 448090..448959 - 289 94986801 pcm LI0357 - protein-L-isoaspartate carboxylmethyltransferase 357 30.35 -1 449124..451136 + 670 94986802 - LI0358 - asmA protein 358 35.30 0 451158..452531 - 457 94986803 mgtE LI0359 - Mg2+/Co2+ transporter 359 33.78 0 452761..453651 + 296 94986804 nadC LI0360 - nicotinate-nucleotide pyrophosphorylase 360 34.28 0 453648..454703 + 351 94986805 - LI0361 - quinolinate synthetase 361 34.91 0 454752..456335 + 527 94986806 nadB LI0362 - aspartate oxidase 362 29.74 -1 456390..456695 - 101 94986807 - LI0363 - integral membrane protein 363 30.52 -1 456801..457475 - 224 94986808 gph LI0364 - phosphatases 364 32.92 0 457964..458686 - 240 94986809 - LI0365 - DNA uptake lipoprotein 365 36.35 0 458692..459618 - 308 94986810 trxB LI0366 - thioredoxin reductase 366 35.19 0 459615..459938 - 107 94986811 trxA LI0367 - Thiol-disulfide isomerase and thioredoxins 367 35.96 0 460064..461131 - 355 94986812 ygjD LI0368 - metal-dependent proteases with chaperone activity 368 36.90 0 461235..462242 - 335 94986813 fbp LI0369 - fructose-1,6-bisphosphatase 369 33.22 0 462356..463225 - 289 94986814 - LI0370 - hypothetical protein 370 35.26 0 463255..464136 - 293 94986815 - LI0371 - hypothetical protein 371 26.92 -2 464159..464470 - 103 94986816 - LI0372 - hypothetical protein 372 29.77 -1 464482..465042 - 186 94986817 pgsA LI0373 - phosphatidylglycerophosphate synthase 373 34.68 0 465190..466008 - 272 94986818 - LI0374 - ATPases involved in chromosome partitioning 374 38.62 +1 466089..466769 - 226 94986819 pcm LI0375 - protein-L-isoaspartate carboxylmethyltransferase 375 34.40 0 467194..468507 + 437 94986820 - LI0376 - membrane proteins related to metalloendopeptidases 376 35.27 0 468756..469631 + 291 94986821 rpsB LI0377 - 30S ribosomal protein S2 377 35.71 0 469657..470541 + 294 94986822 tsf LI0378 - elongation factor Ts 378 32.93 0 470643..471623 + 326 94986823 galE LI0379 - nucleoside-diphosphate-sugar epimerases 379 35.41 0 471627..472781 + 384 94986824 - LI0380 - cell wall biogenesis regulatory protein 380 31.47 0 472788..473591 + 267 94986825 lgtF LI0381 - cell wall biosynthesis glycosyltransferase 381 36.68 0 473612..474328 + 238 94986826 pyrH LI0382 - uridylate kinase 382 31.04 -1 474332..474898 + 188 94986827 rrf LI0383 - ribosome recycling factor 383 33.20 0 474934..475656 + 240 94986828 yaeS LI0384 - undecaprenyl pyrophosphate synthase 384 34.09 0 475653..476450 + 265 94986829 cdsA LI0385 - CDP-diglyceride synthetase 385 35.90 0 476513..477721 + 402 94986830 dxr LI0386 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase 386 36.44 0 477721..478845 + 374 94986831 - LI0387 - membrane-associated Zn-dependent proteases 1 387 33.46 0 478842..479636 + 264 94986832 - LI0388 - hypothetical protein 388 32.66 0 480542..481426 + 294 94986833 - LI0389 - modification methylase BepI (cytosine-specific methyltransferase BepI) 389 35.19 0 481800..483527 - 575 94986834 proS LI0390 - prolyl-tRNA synthetase 390 35.79 0 483648..484544 - 298 94986835 - LI0391 - Fe-S oxidoreductase 391 39.19 +1 484633..485673 + 346 94986836 mreB LI0392 - Actin-like ATPase involved in cell morphogenesis 392 39.34 +1 485787..486668 + 293 94986837 mreC LI0393 - cell shape-determining protein 393 31.63 0 486665..487135 + 156 94986838 - LI0394 - hypothetical protein 394 37.18 0 487119..488912 + 597 94986839 - LI0395 - cell division protein FtsI/penicillin-binding protein 2 395 35.30 0 488937..490052 + 371 94986840 rodA LI0396 - rod shape-determining protein RodA 396 39.37 +1 490077..490424 + 115 94986841 - LI0397 - integral membrane protein CcmA involved in cell shape determination 397 28.13 -2 490519..490941 + 140 94986842 - LI0398 - F0F1-type ATP synthase, subunit b 398 29.02 -1 490959..491537 + 192 94986843 atpF LI0399 - F0F1-type ATP synthase, subunit b 399 31.92 0 491534..492100 + 188 94986844 atpE LI0400 - F0F1 ATP synthase subunit delta 400 38.46 +1 492090..493610 + 506 94986845 atpD LI0401 - F0F1 ATP synthase subunit alpha 401 32.53 0 493615..494484 + 289 94986846 atpC LI0402 - F0F1 ATP synthase subunit gamma 402 38.35 +1 494508..495923 + 471 94986847 atpB LI0403 - F0F1 ATP synthase subunit beta 403 37.81 +1 495934..496335 + 133 94986848 atpA LI0404 - F0F1 ATP synthase subunit epsilon 404 31.88 0 496471..497913 + 480 94986849 xseA LI0405 - exonuclease VII, large subunit 405 36.44 0 497938..498807 + 289 94986850 - LI0406 - membrane proteins related to metalloendopeptidases 406 34.66 0 499089..499991 + 300 94986851 - LI0407 - geranylgeranyl pyrophosphate synthase 407 37.46 0 500065..501978 + 637 94986852 dsx LI0408 - 1-deoxy-D-xylulose-5-phosphate synthase 408 33.82 0 502001..503026 - 341 94986853 - LI0409 - ATPase 409 39.10 +1 504438..505217 - 259 94986854 trpA LI0410 - bifunctional tryptophan synthase TRPB 410 41.71 +2 505228..506397 - 389 94986855 trpB LI0411 - tryptophan synthase subunit beta 411 35.11 0 506387..507004 - 205 94986856 trpF LI0412 - phosphoribosyl anthranilate isomerase 412 34.44 0 506982..507704 - 240 94986857 trpC_2 LI0413 - indole-3-glycerol phosphate synthase protein 413 35.97 0 507758..508744 - 328 94986858 trpD LI0414 - anthranilate phosphoribosyltransferase 414 35.62 0 508741..509877 - 378 94986859 - LI0415 - kynureninase (kyurenine hydrolase) 415 38.46 +1 509880..510698 - 272 94986860 - LI0416 - ABC transporter permease 416 35.37 0 510688..511422 - 244 94986861 - LI0417 - ABC transporter ATP-binding protein 417 37.96 +1 511426..512397 - 323 94986862 - LI0418 - hypothetical protein 418 30.26 -1 514084..514919 + 277 94986863 - LI0419 - short chain dehydrogenase, putative 419 33.02 0 514967..515935 - 322 94986864 bioB LI0420 - biotin synthase 420 33.60 0 515952..517097 + 381 94986865 bioF LI0421 - 7-keto-8-aminopelargonate synthetase and related enzymes 421 27.54 -2 517094..517732 + 212 94986866 - LI0422 - hypothetical protein 422 28.49 -1 517752..518495 + 247 94986867 bioC LI0424 - ubiE/COQ5 methyltransferase family protein 423 32.03 0 518495..519106 + 203 94986868 bioD LI0425 - dethiobiotin synthetase 424 32.32 0 519110..520387 + 425 94986869 bioA LI0426 - adenosylmethionine-8-amino-7-oxononanoate aminotransferase 425 27.43 -2 520457..521032 - 191 94986870 - LI0427 - hypothetical protein 426 35.09 0 522545..523912 + 455 94986871 putP LI0428 - sodium-dependent transporter 427 34.73 0 524004..525074 - 356 94986872 hemN LI0429 - coproporphyrinogen III oxidase-like protein 428 31.52 0 525142..525582 + 146 94986873 - LI0430 - histidine triad nucleotide-binding protein 429 27.84 -2 525657..525947 + 96 94986874 himA LI0431 - nucleoid DNA-binding protein 430 32.72 0 526092..526742 - 216 94986875 - LI0432 - S-adenosylmethionine-dependent methyltransferase involved in cell division 431 34.91 0 527009..528847 - 612 94986876 dsbD LI0433 - hypothetical protein 432 31.49 0 529148..530338 - 396 94986877 - LI0434 - glycosyltransferase 433 34.96 0 530484..531716 + 410 94986878 aspC LI0435 - L,L-diaminopimelate aminotransferase 434 32.39 0 531796..532644 - 282 94986879 - LI0436 - PhyA2 435 35.14 0 532566..533117 - 183 94986880 - LI0437 - histidine acid phosphatase 436 33.79 0 533368..534693 - 441 94986881 - LI0438 - PhyA2 437 40.81 +2 535099..536355 + 418 94986882 hyaA LI0439 - hydrogenase-1 small subunit 438 37.76 +1 536370..538178 + 602 94986883 hyaB LI0440 - hydrogenase-1 large subunit 439 34.18 0 538288..538992 + 234 94986884 hyaC LI0441 - Ni/Fe-hydrogenase 1 B-type cytochrome subunit 440 33.15 0 538995..539531 + 178 94986885 hyaD LI0442 - processing of HyaA and HyaB proteins 441 28.40 -1 540291..540695 + 134 94986886 - LI0443 - hypothetical protein 442 36.41 0 540700..541770 + 356 94986887 - LI0444 - glycosyltransferase 443 33.55 0 541891..542361 - 156 94986888 dtd LI0445 - D-tyrosyl-tRNA deacylase 444 35.83 0 542402..543601 - 399 94986889 - LI0446 - 4-diphosphocytidyl-2-methyl-D-erithritol synthase 445 46.26 +2 543696..543989 + 97 94986890 - LI0447 - hypothetical protein 446 36.86 0 544048..544812 - 254 94986891 - LI0448 - hypothetical protein 447 35.59 0 544847..545644 - 265 94986892 - LI0449 - hypothetical protein 448 37.45 0 545767..546591 - 274 94986893 purL LI0450 - phosphoribosylformylglycinamidine synthase domain-containing protein 449 35.75 0 546832..548484 + 550 94986894 pyrG LI0451 - CTP synthetase 450 38.41 +1 548515..549321 + 268 94986895 kdsA LI0452 - 2-dehydro-3-deoxyphosphooctonate aldolase 451 34.31 0 549318..549929 + 203 94986896 - LI0453 - HAD superfamily low specificity phosphatase 452 33.15 0 550004..550549 + 181 94986897 - LI0454 - hypothetical protein 453 29.82 -1 550649..551218 + 189 94986898 - LI0455 - hypothetical protein 454 33.89 0 551218..551940 + 240 94986899 - LI0456 - ABC transporter ATPase 455 35.65 0 552086..553507 + 473 94986900 rpoN LI0457 - DNA-directed RNA polymerase specialized sigma subunit, sigma54-like protein 34.48 MEAN 3.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0