version 1.0
Lawsonia intracellularis PHE/MN1-00, complete genome - 1..1457619 1180 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 260 37.51 0 324064..325572 - 502 94986705 gad LI0261 - glutamate decarboxylase isozyme 261 36.49 0 325627..327084 - 485 94986706 - LI0262 - amino acid transporters 262 28.93 -1 327353..328624 + 423 94986707 - LI0263 - putative amino acid-amine transport protein 263 37.01 0 328991..330241 + 416 94986708 rho LI0264 - transcription termination factor Rho 264 35.91 0 330371..331534 - 387 94986709 - LI0265 - cysteine sulfinate desulfinase/cysteine desulfurase 265 34.64 0 331531..332373 - 280 94986710 iscU LI0266 - NifU homolog involved in Fe-S cluster formation 266 31.44 0 333321..333689 - 122 94986711 - LI0267 - hypothetical protein 267 38.07 +1 333806..334312 - 168 94986712 ruvC LI0268 - Holliday junction resolvasome, endonuclease subunit 268 38.33 +1 334384..335124 - 246 94986713 yebC LI0269 - hypothetical protein 269 31.51 0 335173..335775 - 200 94986714 ygcA LI0270 - 23S rRNA methylase 270 33.21 0 335866..337446 + 526 94986715 - LI0271 - hypothetical protein 271 31.87 0 337458..338414 + 318 94986716 - LI0272 - hypothetical protein 272 34.06 0 338687..339097 + 136 94986717 - LI0273 - desulfoferrodoxin 273 34.00 0 339468..340676 + 402 94986718 - LI0274 - uncharacterized flavoproteins 274 37.10 0 340816..342117 + 433 94986719 cyoB LI0275 - cytochrome bd-type quinol oxidase, subunit 1 275 35.37 0 342150..343178 + 342 94986720 cyoA LI0276 - cytochrome bd-type quinol oxidase, subunit 2 276 35.00 0 343350..343829 - 159 94986721 - LI0277 - hypothetical protein 277 36.73 0 344241..347804 + 1187 94986722 porA LI0278 - pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit 278 34.89 0 347892..350012 + 706 94986723 pta LI0279 - phosphate acetyltransferase 279 34.81 0 350112..351326 + 404 94986724 ackA LI0280 - acetate kinase 280 33.66 0 351351..352262 - 303 94986725 miaA LI0281 - tRNA delta(2)-isopentenylpyrophosphate transferase 281 30.25 -1 352309..352827 - 172 94986726 kdtB LI0282 - phosphopantetheine adenylyltransferase 282 35.60 0 352803..353375 - 190 94986727 - LI0283 - N6-adenine-specific methylase 283 32.02 0 353516..355117 - 533 94986728 - LI0284 - RNA processing exonuclease 284 34.21 0 355243..356610 - 455 94986729 - LI0285 - cell wall-associated hydrolases (invasion-associated proteins) 285 34.23 0 356715..358055 - 446 94986730 - LI0286 - cell wall-associated hydrolases (invasion-associated proteins) 286 33.38 0 358069..360267 - 732 94986731 recD LI0287 - exonuclease V subunit alpha 287 33.81 0 361133..362386 + 417 94986732 - LI0288 - PAP2 superfamily protein 288 35.48 0 362504..363340 - 278 94986733 - LI0289 - Pirin-related protein 289 30.37 -1 363544..364893 - 449 94986734 - LI0290 - hypothetical protein 290 33.14 0 365970..367550 - 526 94986735 - LI0291 - hypothetical protein 291 31.08 -1 367971..368636 + 221 94986736 - LI0292 - Svh 292 36.51 0 369577..370143 - 188 94986737 fumB LI0293 - fumarate hydratase 293 36.52 0 370169..371014 - 281 94986738 fumA LI0294 - fumarate hydratase 294 34.16 0 371279..371884 - 201 94986739 - LI0295 - hypothetical protein 295 33.52 0 372325..373374 - 349 94986740 purM LI0296 - phosphoribosylaminoimidazole synthetase 296 29.10 -1 373444..373821 + 125 94986741 - LI0297 - hypothetical protein 297 28.84 -1 373843..374799 + 318 94986742 - LI0298 - hypothetical protein 298 33.81 0 375220..377307 - 695 94986743 glyS LI0299 - glycyl-tRNA synthetase, beta subunit 299 36.61 0 377313..378197 - 294 94986744 glyQ LI0300 - glycyl-tRNA synthetase subunit alpha 300 32.00 0 378253..379002 - 249 94986745 recO LI0301 - hypothetical protein 301 31.27 -1 379007..380026 - 339 94986746 - LI0302 - hypothetical protein 302 31.93 0 380045..380971 - 308 94986747 ppi LI0303 - parvulin-like peptidyl-prolyl isomerase 303 32.46 0 381141..382058 - 305 94986748 - LI0304 - parvulin-like peptidyl-prolyl isomerase 304 36.07 0 382096..385563 - 1155 94986749 - LI0305 - transcription-repair coupling factor 305 31.12 -1 385645..387228 - 527 94986750 - LI0306 - integral membrane protein 306 36.29 0 387513..387986 + 157 94986751 greA LI0307 - transcription elongation factor greA 307 35.24 0 388048..389358 + 436 94986752 - LI0308 - 2-methylthioadenine synthetase 308 34.47 0 389463..390344 + 293 94986753 yicC LI0309 - hypothetical protein 309 35.99 0 390597..391235 + 212 94986754 gmk LI0310 - guanylate kinase 310 35.65 0 391242..391931 + 229 94986755 pyrF LI0311 - orotidine-5'-phosphate decarboxylase 311 32.60 0 392001..392819 + 272 94986756 - LI0312 - TPR repeat-containing protein 312 36.03 0 392879..394585 + 568 94986757 recJ LI0313 - single-stranded DNA-specific exonuclease 313 35.78 0 394647..395873 - 408 94986758 pepP LI0314 - Xaa-Pro aminopeptidase 314 35.73 0 396014..396430 + 138 94986759 - LI0315 - CoA-binding protein 315 30.26 -1 396615..397526 + 303 94986760 - LI0316 - DnaJ-class molecular chaperone 316 33.33 0 397583..398272 + 229 94986761 - LI0317 - adenylate kinase-like kinase 317 33.02 0 398358..399626 - 422 94986762 - LI0318 - hypothetical protein 318 36.28 0 399629..400849 - 406 94986763 - LI0319 - ADP-heptose:LPS heptosyltransferase 319 30.68 -1 401285..401962 + 225 94986764 cysG LI0320 - siroheme synthase 320 33.45 0 401949..402839 + 296 94986765 resC LI0321 - ABC-type transport system involved in cytochrome c biogenesis, permease component 321 34.68 0 402814..404079 + 421 94986766 hemA LI0322 - glutamyl-tRNA reductase 322 35.17 0 404208..405515 + 435 94986767 - LI0323 - Signal renition particle GTPase 323 36.24 0 405585..406238 + 217 94986768 thiE LI0324 - thiamine monophosphate synthase 324 37.18 0 406369..407796 - 475 94986769 gltD LI0325 - NADPH-dependent glutamate synthase beta chain and related oxidoreductases 325 32.25 0 408049..408975 + 308 94986770 - LI0326 - SAM-dependent methyltransferase 326 29.56 -1 409616..410542 - 308 94986771 - LI0327 - hypothetical protein 327 33.78 0 410586..411035 - 149 94986772 - LI0328 - hypothetical protein 328 35.08 0 411409..413466 + 685 94986773 glgX LI0329 - Glyen debranching enzyme 329 34.90 0 413485..414825 + 446 94986774 - LI0330 - putative glycosyltransferase 330 33.95 0 414828..416114 + 428 94986775 amyA LI0331 - alpha-amylase 331 36.05 0 416124..420386 + 1420 94986776 glgP LI0332 - carbohydrate phosphorylase family protein 332 33.33 0 420460..421350 - 296 94986777 argB LI0333 - acetylglutamate kinase 333 36.41 0 421371..422672 - 433 94986778 hslU LI0334 - ATP-dependent protease ATP-binding subunit 334 35.31 0 422757..423464 - 235 94986779 livF LI0335 - branched chain amino acid ABC transporter, ATP-binding protein 335 35.04 0 423517..424278 - 253 94986780 livG LI0336 - branched chain amino acid ABC transporter, ATP-binding protein 336 33.74 0 424288..425274 - 328 94986781 livM LI0337 - branched chain amino acid ABC transporter, permease protein 337 33.55 0 425271..426173 - 300 94986782 livH LI0338 - branched chain amino acid ABC transporter, permease protein 338 33.96 0 426224..427348 - 374 94986783 - LI0339 - ABC-type branched-chain amino acid transport systems, periplasmic component 339 32.31 0 427714..428691 + 325 94986784 - LI0340 - hypothetical protein 340 34.18 0 428956..429660 + 234 94986785 - LI0341 - hypothetical protein 341 36.75 0 429818..430519 + 233 94986786 leuB LI0342 - Rossmann fold nucleotide-binding protein 342 35.38 0 430612..431100 + 162 94986787 codA LI0343 - cytosine/adenosine deaminases 343 35.07 0 431319..431606 + 95 94986788 - LI0344 - hypothetical protein 344 34.22 0 431805..432596 + 263 94986789 - LI0345 - SAM-dependent methyltransferases 345 36.63 0 433193..434617 - 474 94986790 htrA LI0346 - trypsin domain/PDZ domain-containing protein 346 36.15 0 434818..437232 - 804 94986791 flgE LI0347 - flagellar hook protein FlgE 347 38.44 +1 437383..438891 - 502 94986792 flgE LI0348 - flagellar hook protein FlgE 348 34.56 0 439256..440152 + 298 94986793 purC LI0349 - phosphoribosylaminoimidazole-succinocarboxamide synthase 349 32.94 0 440193..440957 + 254 94986794 fabI LI0350 - enoyl-[acyl-carrier-protein] reductase (NADH) 350 36.14 0 441137..442456 + 439 94986795 mdh LI0351 - malate dehydrogenase 351 31.45 0 442654..442971 + 105 94986796 rpsF LI0352 - 30S ribosomal protein S6 352 37.16 0 443247..443768 + 173 94986797 rplI LI0353 - 50S ribosomal protein L9 353 36.12 0 443830..445194 + 454 94986798 recQ LI0354 - replicative DNA helicase 354 32.83 0 445449..446039 - 196 94986799 - LI0355 - rRNA methylases 355 34.83 0 446089..448086 - 665 94986800 - LI0356 - ABC transporter ATPase 356 35.75 0 448090..448959 - 289 94986801 pcm LI0357 - protein-L-isoaspartate carboxylmethyltransferase 357 30.35 -1 449124..451136 + 670 94986802 - LI0358 - asmA protein 358 35.30 0 451158..452531 - 457 94986803 mgtE LI0359 - Mg2+/Co2+ transporter 359 33.78 0 452761..453651 + 296 94986804 nadC LI0360 - nicotinate-nucleotide pyrophosphorylase 34.48 MEAN 3.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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