version 1.0
Lawsonia intracellularis PHE/MN1-00, complete genome - 1..1457619 1180 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 218 35.47 0 275627..277594 + 655 94986663 tkt LI0219 - transketolase 219 33.42 0 277821..278945 + 374 94986664 trmD LI0220 - tRNA-(guanine-N1)-methyltransferase 220 36.21 0 278981..279328 + 115 94986665 rplS LI0221 - 50S ribosomal protein L19 221 34.52 0 279395..280069 + 224 94986666 rplS LI0222 - ribonuclease HII 222 31.33 -1 280089..280487 + 132 94986667 - LI0223 - endonuclease 223 32.85 0 280429..281259 + 276 94986668 - LI0224 - methyltransferases 224 32.69 0 281262..281729 + 155 94986669 smpB LI0225 - SsrA-binding protein 225 35.71 0 281750..283432 + 560 94986670 yjjK LI0226 - putative ABC transporter ATP-binding protein 226 34.53 0 283562..284482 - 306 94986671 fabD LI0227 - (acyl-carrier-protein) S-malonyltransferase 227 37.96 +1 284607..285644 - 345 94986672 glpX LI0228 - fructose 1,6-bisphosphatase II 228 32.61 0 285821..287473 + 550 94986673 argS LI0229 - arginyl-tRNA synthetase 229 30.12 -1 287480..288256 + 258 94986674 - LI0230 - hypothetical protein 230 33.21 0 288273..289073 + 266 94986675 - LI0231 - ABC-type transport system involved in resistance to organic solvents, permease component 231 36.22 0 289086..289916 + 276 94986676 - LI0232 - ABC-type transport system involved in resistance to organic solvents, ATPase component 232 32.66 0 289932..290375 + 147 94986677 - LI0233 - ABC-type transport system involved in resistance to organic solvents, periplasmic component 233 29.65 -1 290380..291030 + 216 94986678 - LI0234 - ABC-type transport system involved in resistance to organic solvents, auxiliary component 234 32.11 0 291031..291927 + 298 94986679 - LI0235 - surface lipoprotein 235 34.19 0 292398..295079 - 893 94986680 mutS LI0236 - DNA mismatch repair protein 236 32.14 0 295534..296034 - 166 94986681 - LI0237 - diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 237 31.18 -1 296154..297827 - 557 94986682 cca LI0238 - polyA polymerase family protein 238 32.90 0 297994..298914 - 306 94986683 - LI0239 - site-specific recombinase 239 31.34 -1 299096..299647 + 183 94986684 folk LI0240 - 7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase 240 34.47 0 300171..302201 + 676 94986685 uvrB LI0241 - excinuclease ABC subunit B 241 33.38 0 302221..304269 + 682 94986686 lig LI0242 - NAD-dependent DNA ligase 242 35.26 0 304286..305062 + 258 94986687 dapB LI0243 - dihydrodipicolinate reductase 243 31.50 0 305063..306640 + 525 94986688 nadE LI0244 - NH(3)-dependent NAD(+) synthetase 244 34.36 0 306735..307415 - 226 94986689 hypB LI0245 - hydrogenase accessory protein HypB 245 31.37 -1 307426..307782 - 118 94986690 hypA LI0246 - zinc finger protein 246 31.38 -1 308027..308794 + 255 94986691 - LI0247 - hypothetical protein 247 30.57 -1 308869..309519 + 216 94986692 - LI0248 - hypothetical protein 248 31.63 0 309567..311150 - 527 94986693 recN LI0249 - ATPase involved in DNA repair 249 35.78 0 311205..312023 - 272 94986694 oppC LI0250 - ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 250 34.03 0 312032..313036 - 334 94986695 oppB LI0251 - ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 251 31.99 0 313191..313712 - 173 94986696 - LI0252 - hypothetical protein 252 32.52 0 313725..314339 - 204 94986697 - LI0253 - hypothetical protein 253 34.22 0 314561..315688 + 375 94986698 - LI0254 - hypothetical protein 254 27.66 -2 315691..316236 - 181 94986699 - LI0255 - hypothetical protein 255 29.42 -1 316238..317029 - 263 94986700 - LI0256 - hypothetical protein 256 34.99 0 317243..320752 + 1169 94986701 dnaE LI0257 - DNA polymerase III, alpha subunit 257 36.22 0 320772..321152 + 126 94986702 - LI0258 - F0F1-type ATP synthase, subunit c 258 36.55 0 321305..321553 - 82 94986703 - LI0259 - hypothetical protein 259 33.38 0 321744..323993 + 749 94986704 ntrY LI0260 - Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation 260 37.51 0 324064..325572 - 502 94986705 gad LI0261 - glutamate decarboxylase isozyme 261 36.49 0 325627..327084 - 485 94986706 - LI0262 - amino acid transporters 262 28.93 -1 327353..328624 + 423 94986707 - LI0263 - putative amino acid-amine transport protein 263 37.01 0 328991..330241 + 416 94986708 rho LI0264 - transcription termination factor Rho 264 35.91 0 330371..331534 - 387 94986709 - LI0265 - cysteine sulfinate desulfinase/cysteine desulfurase 265 34.64 0 331531..332373 - 280 94986710 iscU LI0266 - NifU homolog involved in Fe-S cluster formation 266 31.44 0 333321..333689 - 122 94986711 - LI0267 - hypothetical protein 267 38.07 +1 333806..334312 - 168 94986712 ruvC LI0268 - Holliday junction resolvasome, endonuclease subunit 268 38.33 +1 334384..335124 - 246 94986713 yebC LI0269 - hypothetical protein 269 31.51 0 335173..335775 - 200 94986714 ygcA LI0270 - 23S rRNA methylase 270 33.21 0 335866..337446 + 526 94986715 - LI0271 - hypothetical protein 271 31.87 0 337458..338414 + 318 94986716 - LI0272 - hypothetical protein 272 34.06 0 338687..339097 + 136 94986717 - LI0273 - desulfoferrodoxin 273 34.00 0 339468..340676 + 402 94986718 - LI0274 - uncharacterized flavoproteins 274 37.10 0 340816..342117 + 433 94986719 cyoB LI0275 - cytochrome bd-type quinol oxidase, subunit 1 275 35.37 0 342150..343178 + 342 94986720 cyoA LI0276 - cytochrome bd-type quinol oxidase, subunit 2 276 35.00 0 343350..343829 - 159 94986721 - LI0277 - hypothetical protein 277 36.73 0 344241..347804 + 1187 94986722 porA LI0278 - pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit 278 34.89 0 347892..350012 + 706 94986723 pta LI0279 - phosphate acetyltransferase 279 34.81 0 350112..351326 + 404 94986724 ackA LI0280 - acetate kinase 280 33.66 0 351351..352262 - 303 94986725 miaA LI0281 - tRNA delta(2)-isopentenylpyrophosphate transferase 281 30.25 -1 352309..352827 - 172 94986726 kdtB LI0282 - phosphopantetheine adenylyltransferase 282 35.60 0 352803..353375 - 190 94986727 - LI0283 - N6-adenine-specific methylase 283 32.02 0 353516..355117 - 533 94986728 - LI0284 - RNA processing exonuclease 284 34.21 0 355243..356610 - 455 94986729 - LI0285 - cell wall-associated hydrolases (invasion-associated proteins) 285 34.23 0 356715..358055 - 446 94986730 - LI0286 - cell wall-associated hydrolases (invasion-associated proteins) 286 33.38 0 358069..360267 - 732 94986731 recD LI0287 - exonuclease V subunit alpha 287 33.81 0 361133..362386 + 417 94986732 - LI0288 - PAP2 superfamily protein 288 35.48 0 362504..363340 - 278 94986733 - LI0289 - Pirin-related protein 289 30.37 -1 363544..364893 - 449 94986734 - LI0290 - hypothetical protein 290 33.14 0 365970..367550 - 526 94986735 - LI0291 - hypothetical protein 291 31.08 -1 367971..368636 + 221 94986736 - LI0292 - Svh 292 36.51 0 369577..370143 - 188 94986737 fumB LI0293 - fumarate hydratase 293 36.52 0 370169..371014 - 281 94986738 fumA LI0294 - fumarate hydratase 294 34.16 0 371279..371884 - 201 94986739 - LI0295 - hypothetical protein 295 33.52 0 372325..373374 - 349 94986740 purM LI0296 - phosphoribosylaminoimidazole synthetase 296 29.10 -1 373444..373821 + 125 94986741 - LI0297 - hypothetical protein 297 28.84 -1 373843..374799 + 318 94986742 - LI0298 - hypothetical protein 298 33.81 0 375220..377307 - 695 94986743 glyS LI0299 - glycyl-tRNA synthetase, beta subunit 299 36.61 0 377313..378197 - 294 94986744 glyQ LI0300 - glycyl-tRNA synthetase subunit alpha 300 32.00 0 378253..379002 - 249 94986745 recO LI0301 - hypothetical protein 301 31.27 -1 379007..380026 - 339 94986746 - LI0302 - hypothetical protein 302 31.93 0 380045..380971 - 308 94986747 ppi LI0303 - parvulin-like peptidyl-prolyl isomerase 303 32.46 0 381141..382058 - 305 94986748 - LI0304 - parvulin-like peptidyl-prolyl isomerase 304 36.07 0 382096..385563 - 1155 94986749 - LI0305 - transcription-repair coupling factor 305 31.12 -1 385645..387228 - 527 94986750 - LI0306 - integral membrane protein 306 36.29 0 387513..387986 + 157 94986751 greA LI0307 - transcription elongation factor greA 307 35.24 0 388048..389358 + 436 94986752 - LI0308 - 2-methylthioadenine synthetase 308 34.47 0 389463..390344 + 293 94986753 yicC LI0309 - hypothetical protein 309 35.99 0 390597..391235 + 212 94986754 gmk LI0310 - guanylate kinase 310 35.65 0 391242..391931 + 229 94986755 pyrF LI0311 - orotidine-5'-phosphate decarboxylase 311 32.60 0 392001..392819 + 272 94986756 - LI0312 - TPR repeat-containing protein 312 36.03 0 392879..394585 + 568 94986757 recJ LI0313 - single-stranded DNA-specific exonuclease 313 35.78 0 394647..395873 - 408 94986758 pepP LI0314 - Xaa-Pro aminopeptidase 314 35.73 0 396014..396430 + 138 94986759 - LI0315 - CoA-binding protein 315 30.26 -1 396615..397526 + 303 94986760 - LI0316 - DnaJ-class molecular chaperone 316 33.33 0 397583..398272 + 229 94986761 - LI0317 - adenylate kinase-like kinase 317 33.02 0 398358..399626 - 422 94986762 - LI0318 - hypothetical protein 34.48 MEAN 3.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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