version 1.0
Lawsonia intracellularis PHE/MN1-00, complete genome - 1..1457619 1180 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1056 34.59 0 1303342..1303977 + 211 94987501 - LI1059 - redox-sensing transcriptional repressor Rex 1057 34.92 0 1304124..1304564 + 146 94987502 - LI1060 - flagellar biosynthesis chaperone 1058 36.52 0 1304581..1305333 + 250 94987503 - LI1061 - hypothetical protein 1059 36.30 0 1305357..1306130 + 257 94987504 truA LI1062 - tRNA pseudouridine synthase A 1060 37.59 +1 1306382..1306804 + 140 94987505 - LI1063 - hypothetical protein 1061 36.90 0 1307072..1307548 + 158 94987506 fdhF LI1064 - Fe-S-cluster-containing hydrogenase components 1 1062 35.39 0 1307621..1308496 - 291 94987507 rfbD LI1065 - dTDP-4-dehydrorhamnose reductase 1063 34.90 0 1308493..1309512 - 339 94987508 rfbB LI1066 - dTDP-D-glucose 4,6-dehydratase 1064 31.44 0 1309801..1310592 + 263 94987509 - LI1067 - cobalamin biosynthesis protein CbiK, Co2+ chelatase 1065 32.82 0 1310656..1311624 + 322 94987510 - LI1068 - hypothetical protein 1066 30.00 -1 1312240..1312479 + 79 94987511 rnpA LI1069 - RNase P protein component 1067 34.96 0 1312833..1314431 + 532 94987512 yidC LI1070 - preprotein translocase subunit YidC 1068 33.04 0 1314455..1315468 + 337 94987513 jag LI1071 - RNA-binding protein 1069 35.22 0 1315534..1316913 + 459 94987514 trmE LI1072 - tRNA modification GTPase TrmE 1070 34.67 0 1316917..1317513 + 198 94987515 rncS LI1073 - ribonuclease D 1071 32.76 0 1317595..1320534 + 979 94987516 - LI1074 - endonuclease 1072 38.20 +1 1320591..1321721 + 376 94987517 ncd2 LI1075 - dioxygenases related to 2-nitropropane dioxygenase 1073 33.03 0 1321808..1322791 - 327 94987518 glk LI1076 - glucokinase 1074 33.46 0 1322933..1323712 - 259 94987519 - LI1077 - hypothetical protein 1075 30.75 -1 1324889..1326631 + 580 94987520 HydH LI1078 - Signal transduction histidine kinase 1076 35.88 0 1326651..1328066 + 471 94987521 hydG LI1079 - response regulator 1077 36.21 0 1328199..1328615 + 138 94987522 - LI1080 - hypothetical protein 1078 36.38 0 1328645..1329628 - 327 94987523 oppD LI1081 - oligopeptide ABC transporter 1079 40.41 +1 1330153..1330491 + 112 94987524 feoA LI1082 - Fe2+ transport system protein A 1080 35.97 0 1330619..1332820 + 733 94987525 feoB LI1083 - Fe2+ transport system protein B 1081 33.17 0 1332824..1334038 - 404 94987526 glpC LI1084 - sn-glycerol-3-phosphate dehydrogenase subunit C 1082 32.93 0 1334050..1335303 - 417 94987527 - LI1085 - anaerobic glycerol-3-phosphate dehydrogenase subunit B 1083 34.68 0 1335296..1336924 - 542 94987528 glpA LI1086 - anaerobic glycerol-3-phosphate dehydrogenase subunit A 1084 35.51 0 1337223..1337819 - 198 94987529 - LI1087 - hypothetical protein 1085 30.10 -1 1337816..1338124 - 102 94987530 - LI1088 - hypothetical protein 1086 33.03 0 1338433..1339086 + 217 94987531 - LI1089 - methyltransferase 1087 35.24 0 1339149..1339568 + 139 94987532 - LI1090 - transcription regulator 1088 33.85 0 1339592..1340368 + 258 94987533 - LI1091 - putative GTP cyclohydrolase 1089 37.05 0 1340557..1341606 + 349 94987534 - LI1092 - response regulator 1090 35.28 0 1341663..1344893 + 1076 94987535 - LI1093 - Outer membrane protein and related peptidoglycan-associated (lipo)proteins 1091 34.20 0 1344921..1345964 - 347 94987536 - LI1094 - HD-GYP domain-containing protein 1092 36.09 0 1345968..1347383 - 471 94987537 pykF LI1095 - pyruvate kinase 1093 35.56 0 1347589..1348038 + 149 94987538 mraZ LI1096 - cell division protein MraZ 1094 36.10 0 1348109..1349047 + 312 94987539 - LI1097 - S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis 1095 34.20 0 1349553..1351634 + 693 94987540 ftsI LI1098 - cell division protein FtsI/penicillin-binding protein 2 1096 35.68 0 1351636..1353084 + 482 94987541 murE LI1099 - UDP-N-acetylmuramyl tripeptide synthase 1097 35.27 0 1353075..1354469 + 464 94987542 murF LI1100 - UDP-N-acetylmuramyl pentapeptide synthase 1098 31.85 0 1354469..1355545 + 358 94987543 mraY LI1101 - UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 1099 34.32 0 1355559..1356881 + 440 94987544 murD LI1102 - UDP-N-acetylmuramoylalanine-D-glutamate ligase 1100 34.55 0 1356868..1358016 + 382 94987545 spoVE LI1103 - cell division membrane protein 1101 35.81 0 1358021..1359112 + 363 94987546 murG LI1104 - UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase 1102 35.76 0 1359109..1360470 + 453 94987547 murC LI1105 - UDP-N-acetylmuramate-alanine ligase 1103 33.22 0 1360502..1361392 + 296 94987548 - LI1106 - UDP-N-acetylmuramate dehydrogenase 1104 29.71 -1 1361386..1362213 + 275 94987549 ftsQ LI1107 - cell division septal protein 1105 38.69 +1 1362407..1363639 + 410 94987550 ftsA LI1108 - cell division protein FtsA 1106 38.97 +1 1363691..1365073 + 460 94987551 ftsZ LI1109 - cell division protein FtsZ 1107 32.08 0 1365182..1365661 + 159 94987552 - LI1110 - hypothetical protein 1108 32.18 0 1365658..1366440 - 260 94987553 - LI1111 - amidophosphoribosyltransferases 1109 33.17 0 1366446..1367042 - 198 94987554 - LI1112 - multimeric flavodoxin WrbA 1110 34.33 0 1367118..1368020 - 300 94987555 argF LI1113 - ornithine carbamoyltransferase 1111 33.02 0 1368164..1370053 - 629 94987556 - LI1114 - parvulin-like peptidyl-prolyl isomerase 1112 37.66 +1 1370349..1371827 - 492 94987557 flbD LI1115 - response regulator 1113 35.94 0 1372257..1373870 + 537 94987558 priS LI1116 - hydroxylamine reductase 1114 34.27 0 1374180..1375139 + 319 94987559 cheV LI1117 - chemotaxis signal transduction protein 1115 34.32 0 1375188..1375997 + 269 94987560 - LI1118 - hypothetical protein 1116 33.92 0 1376132..1377148 - 338 94987561 gapB LI1119 - glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 1117 37.40 0 1377471..1378307 - 278 94987562 proC LI1120 - pyrroline-5-carboxylate reductase 1118 32.85 0 1378307..1378723 - 138 94987563 ndk LI1121 - nucleoside-diphosphate kinase 1119 32.21 0 1378753..1380090 - 445 94987564 - LI1122 - hypothetical protein 1120 36.57 0 1380396..1381724 - 442 94987565 prc LI1123 - periplasmic protease 1121 32.89 0 1381792..1382472 - 226 94987566 nth LI1124 - endonuclease III, putative 1122 35.71 0 1382916..1385270 - 784 94987567 copA LI1125 - copper-translocating P-type ATPase 1123 35.50 0 1385472..1385933 + 153 94987568 - LI1126 - RNA methyltransferase 1124 36.77 0 1385991..1387358 + 455 94987569 - LI1127 - Na+-driven multidrug efflux pump 1125 33.67 0 1387436..1388335 + 299 94987570 - LI1128 - hypothetical protein 1126 35.91 0 1388490..1389227 + 245 94987571 glnQ LI1129 - ABC-type polar amino acid transport system, ATPase component 1127 33.33 0 1389244..1390113 + 289 94987572 - LI1130 - ribosomal protein L11 methylase 1128 33.92 0 1390148..1390486 - 112 94987573 secG LI1131 - preprotein translocase subunit SecG 1129 34.39 0 1390582..1391340 - 252 94987574 tpiA LI1132 - triosephosphate isomerase 1130 29.72 -1 1391360..1391830 - 156 94987575 rimJ LI1133 - acetyltransferase 1131 33.15 0 1391831..1392370 + 179 94987576 - LI1134 - NTP pyrophosphohydrolases including oxidative damage repair enzymes 1132 35.73 0 1392420..1393421 - 333 94987577 mreB LI1135 - Actin-like ATPase involved in cell morphogenesis 1133 36.33 0 1393424..1394458 - 344 94987578 - LI1136 - hypothetical protein 1134 37.15 0 1394777..1395850 + 357 94987579 cheB LI1137 - chemotaxis response regulator 1135 33.74 0 1395874..1397826 + 650 94987580 - LI1138 - hypothetical protein 1136 31.96 0 1397826..1398701 + 291 94987581 cheR LI1139 - methylase of chemotaxis methyl-accepting proteins 1137 32.04 0 1398717..1399487 + 256 94987582 soj LI1140 - ATPases involved in chromosome partitioning 1138 32.27 0 1399691..1400161 + 156 94987583 cheW LI1141 - chemotaxis signal transduction protein 1139 31.71 0 1400172..1400540 + 122 94987584 cheY LI1142 - CheY-like receiver 1140 34.57 0 1400564..1401208 + 214 94987585 cheA_1 LI1143 - chemotaxis protein histidine kinase-like kinase 1141 36.36 0 1401396..1403609 + 737 94987586 cheA_2 LI1144 - chemotaxis protein histidine kinase-like kinase 1142 32.44 0 1409027..1411030 - 667 94987592 - LI1150 - putative regulator 1143 33.41 0 1411391..1412671 - 426 94987593 - LI1151 - transcriptional regulator 1144 35.50 0 1412680..1413048 - 122 94987594 - LI1152 - hypothetical protein 1145 36.01 0 1413348..1414544 - 398 94987595 - LI1153 - putative outer protein N 1146 36.97 0 1415356..1416042 + 228 94987596 - LI1154 - hypothetical protein 1147 39.59 +1 1416504..1417094 + 196 94987597 - LI1155 - hypothetical protein 1148 36.49 0 1418018..1418524 + 168 94987598 - LI1156 - hypothetical protein 1149 42.59 +2 1419132..1419671 + 179 94987599 - LI1157 - regulatory protein PcrH 1150 40.30 +1 1419668..1420858 + 396 94987600 - LI1158 - hypothetical protein 1151 38.85 +1 1420906..1421703 + 265 94987601 - LI1159 - hypothetical protein 1152 35.22 0 1422992..1424743 + 583 94987602 YscC LI1160 - putative type III secretion protein YscC 1153 35.30 0 1424743..1426164 + 473 94987603 - LI1161 - hypothetical protein 1154 38.12 +1 1426377..1426856 + 159 94987604 - LI1162 - hypothetical protein 1155 34.65 0 1426865..1427701 + 278 94987605 YscJ LI1163 - putative type III secretion protein 34.48 MEAN 3.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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