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Lawsonia intracellularis PHE/MN1-00, complete genome - 1..1457619 1180 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 978 37.96 +1 1208262..1208888 + 208 94987423 rpsD LI0981 - 30S ribosomal protein S4 979 36.11 0 1208901..1209944 + 347 94987424 rpoA LI0982 - DNA-directed RNA polymerase subunit alpha 980 34.12 0 1209934..1210314 + 126 94987425 rplQ LI0983 - ribosomal protein L17 981 34.96 0 1210609..1212024 + 471 94987426 xanB LI0984 - phosphomannose isomerase/GDP-mannose pyrophosphorylase 982 34.41 0 1212317..1213618 + 433 94987427 vc0389 LI0985 - putative Na+/H+ antiporter 983 32.86 0 1213908..1215167 + 419 94987428 hisS LI0986 - histidyl-tRNA synthetase 984 36.00 0 1215195..1216994 + 599 94987429 aspS LI0987 - aspartyl-tRNA synthetase 985 34.74 0 1217085..1218077 + 330 94987430 dppF LI0988 - oligopeptide ABC transporter ATP-binding protein 986 35.16 0 1218216..1218980 + 254 94987431 - LI0989 - 3-deoxy-manno-octulosonate cytidylyltransferase 987 34.39 0 1218980..1220110 + 376 94987432 carA LI0990 - carbamoyl phosphate synthase small subunit 988 34.18 0 1220290..1221117 + 275 94987433 - LI0991 - GluNAc transferase 989 30.61 -1 1221162..1221821 - 219 94987434 - LI0992 - hypothetical protein 990 35.79 0 1222274..1223455 + 393 94987435 acrA LI0993 - multidrug efflux membrane permease 991 36.19 0 1223455..1226604 + 1049 94987436 acrB LI0994 - acriflavin resistance protein D 992 36.96 0 1226608..1227987 + 459 94987437 oprM LI0995 - outer membrane efflux protein 993 35.21 0 1228358..1228783 + 141 94987438 - LI0996 - hypothetical protein 994 35.81 0 1228824..1230155 + 443 94987439 purB LI0997 - adenylosuccinate lyase 995 35.99 0 1230186..1230749 + 187 94987440 pyrE LI0998 - orotate phosphoribosyltransferase 996 34.44 0 1231102..1232007 + 301 94987441 - LI0999 - hypothetical protein 997 35.47 0 1232004..1232939 + 311 94987442 - LI1000 - hypothetical protein 998 37.53 0 1233552..1234028 + 158 94987443 napC LI1001 - cytochrome c nitrite reductase small subunit 999 36.29 0 1234021..1235574 + 517 94987444 nrfA LI1002 - chain A, cytochrome C nitrite reductase 1000 35.12 0 1235666..1236898 - 410 94987445 lysC LI1003 - aspartate kinase 1001 32.50 0 1236903..1237505 - 200 94987446 - LI1004 - ATPase or kinase 1002 37.90 +1 1237651..1238547 + 298 94987447 truB LI1005 - pseudouridine synthase 1003 36.41 0 1239053..1241263 + 736 94987448 pnpA LI1006 - polynucleotide phosphorylase/polyadenylase 1004 32.50 0 1241379..1242812 - 477 94987449 gatB LI1007 - aspartyl/glutamyl-tRNA amidotransferase subunit B 1005 31.14 -1 1242831..1243469 - 212 94987450 - LI1008 - hypothetical protein 1006 35.20 0 1244106..1244963 - 285 94987451 yfjB LI1009 - sugar kinase 1007 37.26 0 1245221..1245856 + 211 94987452 gmhA LI1010 - phosphoheptose isomerase 1008 36.02 0 1246200..1247129 + 309 94987453 hemC LI1011 - porphobilinogen deaminase 1009 34.19 0 1247217..1249670 + 817 94987454 lon LI1012 - ATP-dependent protease 1010 35.33 0 1249691..1250893 - 400 94987455 nar LI1013 - major facilitator superfamily permease 1011 31.47 0 1251229..1251711 + 160 94987456 - LI1014 - hypothetical protein 1012 36.86 0 1251726..1253258 + 510 94987457 gmpA LI1015 - phosphoglyceromutase 1013 30.85 -1 1253603..1253965 - 120 94987458 - LI1016 - hypothetical protein 1014 32.34 0 1253967..1254572 - 201 94987459 - LI1017 - hypothetical protein 1015 34.40 0 1254631..1256223 - 530 94987460 rfaQ LI1018 - ADP-heptose:LPS heptosyltransferase 1016 35.52 0 1256500..1257321 - 273 94987461 lpxA LI1019 - UDP-N-acetylglucosamine acyltransferase 1017 34.63 0 1257321..1257782 - 153 94987462 fabZ LI1020 - (3R)-hydroxymyristoyl-(acyl-carrier-protein) dehydratase 1018 34.41 0 1257792..1258817 - 341 94987463 lpxD LI1021 - UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 1019 34.94 0 1258821..1259381 - 186 94987464 - LI1022 - Outer membrane protein 1020 32.56 0 1259526..1261328 - 600 94987465 amiA LI1023 - N-acetylmuramoyl-L-alanine amidase 1021 34.12 0 1261471..1264125 - 884 94987466 - LI1024 - Outer membrane protein/protective antigen OMA87 1022 35.45 0 1264118..1264825 - 235 94987467 lolD LI1025 - ABC-type transport system, involved in lipoprotein release, permease component 1023 34.81 0 1264828..1266111 - 427 94987468 lolC LI1026 - ABC-type transport system, involved in lipoprotein release, permease component 1024 35.74 0 1266111..1267484 - 457 94987469 lysU LI1027 - lysyl-tRNA synthetase (class II) 1025 33.58 0 1268376..1269200 + 274 94987470 - LI1028 - phosphate-binding protein 1026 32.49 0 1269253..1270083 + 276 94987471 pstC LI1029 - phosphate transporter permease PstC 1027 33.45 0 1270080..1270970 + 296 94987472 pstA LI1030 - phosphate ABC transporter, permease protein 1028 30.75 -1 1270961..1271734 + 257 94987473 pstB LI1031 - phosphate ABC transporter ATP-binding protein 1029 38.16 +1 1271838..1272293 - 151 94987474 - LI1032 - hypothetical protein 1030 32.34 0 1272481..1273890 - 469 94987475 - LI1033 - hypothetical protein 1031 32.90 0 1274250..1275641 - 463 94987476 - LI1034 - hypothetical protein 1032 32.17 0 1276286..1277317 - 343 94987477 - LI1035 - hypothetical protein 1033 33.75 0 1277447..1278403 - 318 94987478 - LI1036 - hypothetical protein 1034 39.34 +1 1278568..1279566 - 332 94987479 - LI1037 - hypothetical protein 1035 25.47 -2 1279875..1280561 - 228 94987480 - LI1038 - hypothetical protein 1036 32.55 0 1281061..1282206 - 381 94987481 - LI1039 - hypothetical protein 1037 33.04 0 1282447..1283466 - 339 94987482 - LI1040 - hypothetical protein 1038 31.93 0 1283628..1284554 - 308 94987483 - LI1041 - hypothetical protein 1039 34.83 0 1285000..1286004 - 334 94987484 - LI1042 - hypothetical protein 1040 37.65 +1 1286368..1287339 - 323 94987485 hprA LI1043 - lactate dehydrogenase and related dehydrogenases 1041 34.80 0 1287421..1288035 - 204 94987486 - LI1044 - hypothetical protein 1042 32.40 0 1288038..1288997 - 319 94987487 pqiB LI1045 - paraquat-inducible protein B 1043 34.73 0 1288994..1289782 - 262 94987488 - LI1046 - ABC-type transport system involved in resistance to organic solvents, ATPase component 1044 34.88 0 1289790..1290950 - 386 94987489 ttg2B LI1047 - ABC-type transport system involved in resistance to organic solvents, permease component 1045 34.91 0 1291103..1291672 - 189 94987490 grpE LI1048 - molecular chaperone GrpE (heat shock protein) 1046 34.97 0 1292388..1293122 + 244 94987491 - LI1049 - hypothetical protein 1047 34.49 0 1293526..1294392 + 288 94987492 - LI1050 - metal-dependent phosphoesterase 1048 35.43 0 1294652..1297465 + 937 94987493 ileS LI1051 - isoleucyl-tRNA synthetase 1049 32.32 0 1297490..1297984 + 164 94987494 lsp LI1052 - lipoprotein signal peptidase 1050 36.71 0 1298127..1299044 + 305 94987495 - LI1053 - hypothetical protein 1051 33.72 0 1299149..1299931 + 260 94987496 cheZ LI1054 - chemotaxis protein 1052 33.60 0 1300313..1301428 + 371 94987497 lpxB LI1055 - Lipid A disaccharide synthetase 1053 27.60 -2 1301682..1302152 + 156 94987498 - LI1056 - hypothetical protein 1054 31.91 0 1302188..1302889 + 233 94987499 atpA LI1057 - F0F1-type ATP synthase, subunit a 1055 37.07 0 1302949..1303296 + 115 94987500 atpC LI1058 - F0F1-type ATP synthase, subunit c 1056 34.59 0 1303342..1303977 + 211 94987501 - LI1059 - redox-sensing transcriptional repressor Rex 1057 34.92 0 1304124..1304564 + 146 94987502 - LI1060 - flagellar biosynthesis chaperone 1058 36.52 0 1304581..1305333 + 250 94987503 - LI1061 - hypothetical protein 1059 36.30 0 1305357..1306130 + 257 94987504 truA LI1062 - tRNA pseudouridine synthase A 1060 37.59 +1 1306382..1306804 + 140 94987505 - LI1063 - hypothetical protein 1061 36.90 0 1307072..1307548 + 158 94987506 fdhF LI1064 - Fe-S-cluster-containing hydrogenase components 1 1062 35.39 0 1307621..1308496 - 291 94987507 rfbD LI1065 - dTDP-4-dehydrorhamnose reductase 1063 34.90 0 1308493..1309512 - 339 94987508 rfbB LI1066 - dTDP-D-glucose 4,6-dehydratase 1064 31.44 0 1309801..1310592 + 263 94987509 - LI1067 - cobalamin biosynthesis protein CbiK, Co2+ chelatase 1065 32.82 0 1310656..1311624 + 322 94987510 - LI1068 - hypothetical protein 1066 30.00 -1 1312240..1312479 + 79 94987511 rnpA LI1069 - RNase P protein component 1067 34.96 0 1312833..1314431 + 532 94987512 yidC LI1070 - preprotein translocase subunit YidC 1068 33.04 0 1314455..1315468 + 337 94987513 jag LI1071 - RNA-binding protein 1069 35.22 0 1315534..1316913 + 459 94987514 trmE LI1072 - tRNA modification GTPase TrmE 1070 34.67 0 1316917..1317513 + 198 94987515 rncS LI1073 - ribonuclease D 1071 32.76 0 1317595..1320534 + 979 94987516 - LI1074 - endonuclease 1072 38.20 +1 1320591..1321721 + 376 94987517 ncd2 LI1075 - dioxygenases related to 2-nitropropane dioxygenase 1073 33.03 0 1321808..1322791 - 327 94987518 glk LI1076 - glucokinase 1074 33.46 0 1322933..1323712 - 259 94987519 - LI1077 - hypothetical protein 1075 30.75 -1 1324889..1326631 + 580 94987520 HydH LI1078 - Signal transduction histidine kinase 1076 35.88 0 1326651..1328066 + 471 94987521 hydG LI1079 - response regulator 1077 36.21 0 1328199..1328615 + 138 94987522 - LI1080 - hypothetical protein 34.48 MEAN 3.07 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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