version 1.0
Kocuria rhizophila DC2201, complete genome - 1..2697540 2357 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 796 75.50 +1 860135..860983 + 282 184200442 - KRH_07960 - uracil-DNA glycosylase 797 77.55 +1 861108..861254 + 48 184200443 - KRH_07970 - hypothetical protein 798 73.13 0 861349..861735 + 128 184200444 - KRH_07980 - hypothetical protein 799 70.52 0 861895..862413 + 172 184200445 - KRH_07990 - hypothetical protein 800 66.31 -1 862777..863340 - 187 184200446 - KRH_08000 - hypothetical protein 801 71.94 0 863659..864645 - 328 184200447 mdh KRH_08010 - malate dehydrogenase 802 69.68 0 864784..865281 + 165 184200448 tpx KRH_08020 - thiol peroxidase 803 68.47 0 865521..867734 - 737 184200449 icd KRH_08030 - isocitrate dehydrogenase 804 72.44 0 867853..868302 - 149 184200450 - KRH_08040 - hypothetical protein 805 62.58 -2 868740..870527 + 595 184200451 - KRH_08050 - putative peptide ABC transporter peptide-binding protein 806 66.67 -1 870637..872172 + 511 184200452 - KRH_08060 - putative peptide ABC transporter permease protein 807 69.18 0 872169..873242 + 357 184200453 - KRH_08070 - putative peptide ABC transporter permease protein 808 74.61 0 873254..873895 - 213 184200454 - KRH_08080 - hypothetical protein 809 70.39 0 874402..876147 + 581 184200455 - KRH_08090 - putative ABC transporter ATP-binding protein 810 73.39 0 876236..876934 + 232 184200456 - KRH_08100 - hypothetical protein 811 72.22 0 876953..877438 - 161 184200457 - KRH_08110 - hypothetical protein 812 69.36 0 877600..877896 + 98 184200458 gatC KRH_08120 - aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C 813 72.33 0 877893..879500 + 535 184200459 gatA KRH_08130 - aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A 814 68.92 0 879500..881005 + 501 184200460 gatB KRH_08140 - aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B 815 74.02 0 881313..882617 - 434 184200461 - KRH_08150 - hypothetical protein 816 73.55 0 882766..883608 + 280 184200462 - KRH_08160 - hypothetical protein 817 70.97 0 883731..884009 - 92 184200463 - KRH_08170 - hypothetical protein 818 71.30 0 884197..884520 - 107 184200464 - KRH_08180 - branched-chain amino acid export protein small subunit 819 70.18 0 884501..885211 - 236 184200465 - KRH_08190 - branched-chain amino acid export protein large subunit 820 73.61 0 885319..887334 + 671 184200466 - KRH_08200 - S9C family peptidase 821 68.19 0 887562..889469 + 635 184200467 typA KRH_08210 - putative GTP-binding protein TypA 822 75.18 +1 889544..890377 + 277 184200468 mshB KRH_08220 - N-acetyl-1-D-myo-inosityl-2-amino-2-deoxy-alpha- D-glucopyranoside deacetylase MshB 823 75.08 +1 890374..891027 + 217 184200469 - KRH_08230 - hypothetical protein 824 65.74 -1 891090..891413 + 107 184200470 - KRH_08240 - ferredoxin 825 73.82 0 891418..892563 + 381 184200471 - KRH_08250 - aminotransferase 826 63.86 -1 892684..894039 + 451 184200472 gltA KRH_08260 - citrate synthase 827 69.91 0 894219..895235 - 338 184200473 galE KRH_08270 - UDP-glucose 4-epimerase 828 72.74 0 895499..896470 - 323 184200474 dapD KRH_08280 - tetrahydrodipicolinate N-succinyltransferase 829 72.18 0 896595..897701 + 368 184200475 dapE KRH_08290 - succinyl-diaminopimelate desuccinylase 830 72.35 0 897723..898601 + 292 184200476 - KRH_08300 - hypothetical protein 831 76.88 +1 898598..900076 + 492 184200477 - KRH_08310 - hypothetical protein 832 67.86 0 900242..900409 + 55 184200478 - KRH_08320 - hypothetical protein 833 75.54 +1 900630..901001 - 123 184200479 - KRH_08330 - chromosome condensation/camphor resistance protein CrcB 834 75.34 +1 900998..901435 - 145 184200480 - KRH_08340 - chromosome condensation/camphor resistance protein CrcB 835 74.41 0 901432..902064 - 210 184200481 - KRH_08350 - hypothetical protein 836 74.50 0 902357..903007 + 216 184200482 - KRH_08360 - hypothetical protein 837 70.90 0 903046..903399 + 117 184200483 tatB KRH_08370 - putative Sec-independent protein translocase protein TatB 838 74.69 0 903419..904615 - 398 184200484 - KRH_08380 - hypothetical protein 839 73.19 0 904612..905424 - 270 184200485 - KRH_08390 - hypothetical protein 840 70.05 0 905417..906715 - 432 184200486 - KRH_08400 - hypothetical protein 841 73.45 0 906874..907875 + 333 184200487 - KRH_08410 - hypothetical protein 842 70.90 0 907973..909580 - 535 184200488 pepP KRH_08420 - putative Xaa-Pro aminopeptidase 843 72.54 0 909697..910548 + 283 184200489 - KRH_08430 - hypothetical protein 844 70.80 0 910558..911427 - 289 184200490 - KRH_08440 - putative methyltransferase 845 72.30 0 911433..913100 - 555 184200491 - KRH_08450 - putative DEAD-box RNA helicase 846 69.33 0 913419..913718 - 99 184200492 - KRH_08460 - hypothetical protein 847 70.21 0 913742..914419 - 225 184200493 - KRH_08470 - TetR family transcriptional regulator 848 74.51 0 914452..915765 - 437 184200494 hemA KRH_08480 - glutamyl-tRNA reductase 849 76.31 +1 915894..917117 + 407 184200495 hemE KRH_08490 - uroporphyrinogen decarboxylase 850 76.48 +1 917114..918601 + 495 184200496 - KRH_08500 - putative protoporphyrinogen oxidase 851 70.15 0 918701..919417 + 238 184200497 - KRH_08510 - hypothetical protein 852 71.81 0 919419..920624 + 401 184200498 hemH KRH_08520 - ferrochelatase 853 76.08 +1 920621..921565 + 314 184200499 hemC KRH_08530 - porphobilinogen deaminase 854 77.75 +1 921562..922707 + 381 184200500 - KRH_08540 - hypothetical protein 855 70.85 0 922740..923744 + 334 184200501 hemB KRH_08550 - delta-aminolevulinic acid dehydratase 856 72.50 0 923816..925135 + 439 184200502 hemL KRH_08560 - glutamate-1-semialdehyde aminotransferase 857 75.11 +1 925254..925952 - 232 184200503 dnaQ KRH_08570 - putative DNA polymerase III epsilon subunit 858 75.07 +1 926400..930125 + 1241 184200504 - KRH_08580 - UvrD/REP helicase family protein 859 73.39 0 930122..933559 + 1145 184200505 - KRH_08590 - UvrD/REP helicase family protein 860 75.70 +1 933508..934902 - 464 184200506 - KRH_08600 - hypothetical protein 861 74.77 0 934943..935917 + 324 184200507 nudC KRH_08610 - putative NADH pyrophosphatase 862 73.26 0 935914..937704 + 596 184200508 - KRH_08620 - putative ATP-dependent DNA helicase 863 73.72 0 937823..938644 - 273 184200509 - KRH_08630 - putative hydrolase 864 71.60 0 938641..940119 - 492 184200510 - KRH_08640 - monooxygenase 865 75.00 +1 940430..941437 + 335 184200511 - KRH_08650 - LacI family transcriptional regulator 866 77.92 +1 941583..942488 - 301 184200512 - KRH_08660 - hypothetical protein 867 74.12 0 942638..943174 + 178 184200513 - KRH_08670 - hypothetical protein 868 70.82 0 943515..945008 - 497 184200514 - KRH_08680 - hypothetical protein 869 72.99 0 945531..946652 + 373 184200515 - KRH_08690 - hypothetical protein 870 67.62 0 946757..949708 + 983 184200516 - KRH_08700 - hypothetical protein 871 72.55 0 950260..951858 - 532 184200517 - KRH_08710 - hypothetical protein 872 67.46 0 951861..952616 - 251 184200518 - KRH_08720 - hypothetical protein 873 74.39 0 952686..954704 - 672 184200519 - KRH_08730 - hypothetical protein 874 72.62 0 954952..956580 + 542 184200520 - KRH_08740 - putative protease Do 875 70.75 0 956692..957156 - 154 184200521 - KRH_08750 - putative RNA methyltransferase 876 75.02 +1 957274..958506 + 410 184200522 iscS KRH_08760 - cysteine desulfurase 877 73.18 0 958590..959741 + 383 184200523 - KRH_08770 - putative tRNA uridine-sulfurtransferase 878 71.01 0 959804..960217 + 137 184200524 - KRH_08780 - chorismate mutase 879 77.32 +1 960214..961236 + 340 184200525 - KRH_08790 - hypothetical protein 880 68.27 0 961325..962011 + 228 184200526 mtrA KRH_08800 - two-component response regulator MtrA 881 70.48 0 962008..963870 + 620 184200527 mtrB KRH_08810 - two-component sensor histidine kinase MtrB 882 71.56 0 963867..965666 + 599 184200528 - KRH_08820 - hypothetical protein 883 78.33 +1 966118..966906 + 262 184200529 - KRH_08830 - hypothetical protein 884 68.39 0 967034..967729 + 231 184200530 - KRH_08840 - hypothetical protein 885 68.89 0 967881..970664 + 927 184200531 secA KRH_08850 - preprotein translocase SecA subunit 886 74.00 0 970677..971126 - 149 184200532 - KRH_08860 - hypothetical protein 887 75.23 +1 971272..972159 - 295 184200533 - KRH_08870 - hypothetical protein 888 73.90 0 972459..973025 + 188 184200534 - KRH_08880 - hypothetical protein 889 70.37 0 973027..973242 - 71 184200535 - KRH_08890 - hypothetical protein 890 74.07 0 973472..974146 + 224 184200536 - KRH_08900 - hypothetical protein 891 77.19 +1 974143..975786 + 547 184200537 - KRH_08910 - hypothetical protein 892 72.29 0 975808..977391 + 527 184200538 - KRH_08920 - two-component histidine kinase 893 70.67 0 977557..977856 - 99 184200539 - KRH_08930 - WhiB family regulatory protein 894 73.15 0 978107..978538 + 143 184200540 - KRH_08940 - hypothetical protein 895 77.14 +1 978562..983163 - 1533 184200541 - KRH_08950 - hypothetical protein 70.94 MEAN 3.83 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.