version 1.0
Kocuria rhizophila DC2201, complete genome - 1..2697540 2357 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 513 68.79 0 562709..562990 - 93 184200159 - KRH_05130 - hypothetical protein 514 70.09 0 563188..563625 + 145 184200160 - KRH_05140 - hypothetical protein 515 70.63 0 563720..564148 + 142 184200161 - KRH_05150 - cysteine synthase 516 70.50 0 564191..564895 + 234 184200162 - KRH_05160 - cysteine synthase 517 66.67 -1 564633..564818 + 61 184200163 - KRH_05170 - cysteine synthase 518 58.39 -2 564892..565314 - 140 184200164 - KRH_05180 - hypothetical protein 519 63.45 -1 565347..566030 - 227 184200165 - KRH_05190 - hypothetical protein 520 66.67 -1 565646..566854 - 402 184200166 - KRH_05200 - hypothetical protein 521 65.77 -1 566949..567950 - 333 184200167 - KRH_05210 - hypothetical protein 522 63.73 -1 567966..568373 - 135 184200168 - KRH_05220 - hypothetical protein 523 62.01 -2 568589..570154 + 521 184200169 hsdM KRH_05230 - type I restriction enzyme M protein 524 58.81 -2 570151..571347 + 398 184200170 hsdS KRH_05240 - type I restriction enzyme S protein 525 56.60 -2 571344..572078 + 244 184200171 - KRH_05250 - hypothetical protein 526 61.59 -2 572075..575209 + 1044 184200172 hsdR KRH_05260 - type I restriction enzyme R protein 527 51.57 -2 575309..576202 + 297 184200173 - KRH_05270 - hypothetical protein 528 68.92 0 577184..577627 + 147 184200174 - KRH_05280 - Fur family transcriptional regulator 529 65.03 -1 577702..579228 + 508 184200175 katA KRH_05290 - catalase 530 64.74 -1 579654..580121 + 155 184200176 - KRH_05300 - hypothetical protein 531 64.62 -1 580193..580876 - 227 184200177 - KRH_05310 - hypothetical protein 532 65.52 -1 580882..581493 - 203 184200178 - KRH_05320 - hypothetical protein 533 76.04 +1 581777..582790 + 337 184200179 menC KRH_05330 - putative o-succinylbenzoate synthase 534 67.61 0 583109..585334 + 741 184200180 - KRH_05340 - hypothetical protein 535 70.28 0 585635..587293 + 552 184200181 nirA KRH_05350 - putative nitrite/sulfite reductase 536 72.45 0 587290..588153 + 287 184200182 cysH KRH_05360 - phosphoadenosine phosphosulfate reductase 537 71.26 0 588135..589070 + 311 184200183 cysD KRH_05370 - sulfate adenylyltransferase subunit 2 538 72.33 0 589073..590413 + 446 184200184 cysN KRH_05380 - sulfate adenylyltransferase subunit 1 539 75.85 +1 590527..592530 + 667 184200185 menD KRH_05390 - putative menaquinone biosynthesis protein MenD 540 72.90 0 592756..593493 + 245 184200186 - KRH_05400 - putative oxidoreductase 541 68.61 0 593503..594273 - 256 184200187 - KRH_05410 - putative amino acid ABC transporter amino acid-binding protein 542 76.85 +1 594348..595928 - 526 184200188 - KRH_05420 - isochorismate synthase 543 74.84 +1 596084..597355 + 423 184200189 - KRH_05430 - putative oxidoreductase 544 72.06 0 597408..598427 + 339 184200190 - KRH_05440 - putative polyprenyl diphosphate synthase 545 66.44 -1 598510..600291 + 593 184200191 - KRH_05450 - sodium-dependent transporter 546 76.09 +1 600288..600584 + 98 184200192 - KRH_05460 - hypothetical protein 547 70.93 0 600678..601616 - 312 184200193 - KRH_05470 - hypothetical protein 548 74.22 0 601666..603147 - 493 184200194 - KRH_05480 - hypothetical protein 549 73.98 0 603370..604833 + 487 184200195 - KRH_05490 - hypothetical protein 550 67.39 0 605120..606643 - 507 184200196 katA KRH_05500 - catalase 551 67.23 0 606636..607163 - 175 184200197 - KRH_05510 - Fur family transcriptional regulator 552 77.47 +1 607885..609624 + 579 184200198 - KRH_05520 - RNA polymerase ECF-type sigma factor 553 70.86 0 609683..610588 + 301 184200199 - KRH_05530 - protease HtpX-like protein 554 62.60 -2 610801..611292 - 163 184200200 - KRH_05540 - hypothetical protein 555 75.44 +1 611342..612253 - 303 184200201 - KRH_05550 - hypothetical protein 556 67.66 0 612803..613204 + 133 184200202 trxA KRH_05560 - thioredoxin 557 71.67 0 613445..614143 - 232 184200203 - KRH_05570 - hypothetical protein 558 76.00 +1 614254..615249 - 331 184200204 - KRH_05580 - hypothetical protein 559 76.98 +1 615473..617227 + 584 184200205 - KRH_05590 - hypothetical protein 560 72.22 0 617363..619522 + 719 184200206 deaD KRH_05600 - ATP-dependent DEAD-box RNA helicase DeaD 561 72.22 0 620295..620744 + 149 184200207 - KRH_05610 - hypothetical protein 562 71.43 0 620741..621223 + 160 184200208 - KRH_05620 - hypothetical protein 563 74.49 0 621235..622500 + 421 184200209 murB KRH_05630 - UDP-N-acetylenolpyruvoylglucosamine reductase 564 70.10 0 622553..622960 + 135 184200210 - KRH_05640 - hypothetical protein 565 70.89 0 623046..624182 - 378 184200211 asd KRH_05650 - aspartate-semialdehyde dehydrogenase 566 81.70 +2 624179..624331 - 50 184200212 - KRH_05660 - hypothetical protein 567 68.25 0 624418..624795 - 125 184200213 - KRH_05670 - hypothetical protein 568 73.73 0 624800..625351 - 183 184200214 folA KRH_05680 - dihydrofolate reductase 569 69.71 0 625465..626286 - 273 184200215 thyA KRH_05690 - thymidylate synthase 570 71.40 0 626365..627315 - 316 184200216 mutT KRH_05700 - putative NTP pyrophosphohydrolase MutT 571 73.46 0 627394..628305 - 303 184200217 mshD KRH_05710 - acetyltransferase MshD 572 71.59 0 628339..629028 - 229 184200218 - KRH_05720 - putative transcriptional regulator 573 75.07 +1 629176..629937 + 253 184200219 - KRH_05730 - hypothetical protein 574 58.33 -2 629942..630049 + 35 184200220 - KRH_05740 - hypothetical protein 575 71.50 0 630053..630673 + 206 184200221 - KRH_05750 - hypothetical protein 576 75.51 +1 630670..631902 + 410 184200222 - KRH_05760 - hypothetical protein 577 71.41 0 631999..633030 - 343 184200223 - KRH_05770 - 6-phosphofructokinase 578 65.62 -1 633222..634175 + 317 184200224 ppk2 KRH_05780 - polyphosphate kinase 2 579 76.80 +1 634227..634808 + 193 184200225 - KRH_05790 - hypothetical protein 580 74.71 0 634850..636403 + 517 184200226 - KRH_05800 - hypothetical protein 581 77.05 +1 636460..636825 - 121 184200227 - KRH_05810 - hypothetical protein 582 70.87 0 636822..638033 - 403 184200228 - KRH_05820 - aspartate aminotransferase 583 64.42 -1 638400..638666 + 88 184200229 secE KRH_05830 - preprotein translocase SecE subunit 584 67.80 0 638713..639597 + 294 184200230 nusG KRH_05840 - transcription antitermination protein NusG 585 64.35 -1 639729..640160 + 143 184200231 rplK KRH_05850 - 50S ribosomal protein L11 586 67.51 0 640248..640958 + 236 184200232 rplA KRH_05860 - 50S ribosomal protein L1 587 72.15 0 641153..642337 + 394 184200233 - KRH_05870 - hypothetical protein 588 77.71 +1 642438..643877 - 479 184200234 - KRH_05880 - putative molybdenum cofactor biosynthesis protein 589 75.76 +1 643870..644133 - 87 184200235 moaD KRH_05890 - putative molybdopterin synthase small subunit MoaD 590 72.00 0 644137..645168 - 343 184200236 moaA KRH_05900 - molybdenum cofactor biosynthesis protein A 591 78.87 +2 645276..646742 + 488 184200237 moeA KRH_05910 - molybdopterin biosynthesis protein MoeA 592 72.89 0 646739..647236 + 165 184200238 moaC KRH_05920 - molybdenum cofactor biosynthesis protein C 593 75.93 +1 647308..648495 + 395 184200239 moaE KRH_05930 - putative bifunctional molybdopterin biosynthesis protein MoaE 594 74.07 0 648497..649333 + 278 184200240 - KRH_05940 - FdhD protein 595 65.54 -1 649603..650136 + 177 184200241 rplJ KRH_05950 - 50S ribosomal protein L10 596 67.44 0 650263..650649 + 128 184200242 rplL KRH_05960 - 50S ribosomal protein L7/L12 597 78.89 +2 650674..650943 + 89 184200243 - KRH_05970 - hypothetical protein 598 71.92 0 651254..654148 + 964 184200244 gcvP KRH_05980 - glycine dehydrogenase 599 73.65 0 654148..655293 + 381 184200245 gcvT KRH_05990 - aminomethyltransferase 600 72.72 0 655443..656186 + 247 184200246 - KRH_06000 - hypothetical protein 601 66.87 -1 656414..659923 + 1169 184200247 rpoB KRH_06010 - DNA-directed RNA polymerase beta subunit 602 67.44 0 659989..663879 + 1296 184200248 rpoC KRH_06020 - DNA-directed RNA polymerase beta' subunit 603 75.42 +1 664067..664843 + 258 184200249 - KRH_06030 - IclR family transcriptional regulator 604 69.97 0 665025..665780 + 251 184200250 pcaH KRH_06040 - protocatechuate 3,4-dioxygenase beta subunit 605 73.09 0 665830..666405 + 191 184200251 pcaG KRH_06050 - protocatechuate 3,4-dioxygenase alpha subunit 606 77.73 +1 666405..667877 + 490 184200252 pcaB KRH_06060 - 3-carboxy-cis,cis-muconate cycloisomerase 607 76.26 +1 667874..668665 + 263 184200253 pcaD KRH_06070 - putative 3-oxoadipate enol-lactonase 608 70.43 0 668820..669218 + 132 184200254 pcaC KRH_06080 - 4-carboxymuconolactone decarboxylase 609 72.39 0 669300..669998 + 232 184200255 pcaI KRH_06090 - 3-oxoadipate CoA-transferase subunit A 610 71.85 0 669995..670669 + 224 184200256 pcaJ KRH_06100 - 3-oxoadipate CoA-transferase subunit B 611 65.87 -1 670956..671330 + 124 184200257 rpsL KRH_06110 - 30S ribosomal protein S12 612 66.03 -1 671330..671800 + 156 184200258 rpsG KRH_06120 - 30S ribosomal protein S7 70.94 MEAN 3.83 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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