version 1.0
Kocuria rhizophila DC2201, complete genome - 1..2697540 2357 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 445 76.24 +1 484231..485097 - 288 184200091 - KRH_04450 - putative phenazine biosynthesis protein 446 74.44 0 485358..486605 + 415 184200092 - KRH_04460 - MFS transporter 447 73.33 0 486719..489733 - 1004 184200093 - KRH_04470 - putative FAD linked oxidase 448 73.87 0 489744..490673 - 309 184200094 - KRH_04480 - hypothetical protein 449 66.57 -1 490670..492811 - 713 184200095 - KRH_04490 - penicillin-binding protein 450 64.62 -1 492929..493123 + 64 184200096 - KRH_04500 - hypothetical protein 451 72.92 0 493143..493622 + 159 184200097 - KRH_04510 - hypothetical protein 452 73.11 0 493625..494539 + 304 184200098 - KRH_04520 - hypothetical protein 453 70.21 0 494752..495429 - 225 184200099 - KRH_04530 - Crp family transcriptional regulator 454 72.32 0 495685..496869 + 394 184200100 - KRH_04540 - S1C family peptidase 455 69.46 0 497032..497496 - 154 184200101 aroD KRH_04550 - 3-dehydroquinate dehydratase 456 69.44 0 497731..499680 - 649 184200102 acs KRH_04560 - acetate--CoA ligase 457 73.84 0 499891..500727 + 278 184200103 nth KRH_04570 - putative endonuclease III 458 72.16 0 500739..501521 + 260 184200104 - KRH_04580 - hypothetical protein 459 74.59 0 501618..503384 - 588 184200105 - KRH_04590 - putative DNA polymerase 460 72.93 0 503527..503973 - 148 184200106 - KRH_04600 - hypothetical protein 461 75.15 +1 504198..504869 + 223 184200107 - KRH_04610 - hypothetical protein 462 71.35 0 504906..505673 - 255 184200108 - KRH_04620 - hypothetical protein 463 77.21 +1 505812..506921 + 369 184200109 - KRH_04630 - hypothetical protein 464 75.04 +1 506918..508135 + 405 184200110 - KRH_04640 - hypothetical protein 465 76.60 +1 508132..508896 + 254 184200111 - KRH_04650 - hypothetical protein 466 74.75 0 508893..509498 + 201 184200112 - KRH_04660 - hypothetical protein 467 72.36 0 509641..510009 + 122 184200113 - KRH_04670 - hypothetical protein 468 75.90 +1 510131..510628 + 165 184200114 - KRH_04680 - hypothetical protein 469 76.15 +1 510615..510983 + 122 184200115 - KRH_04690 - hypothetical protein 470 72.54 0 511119..513449 - 776 184200116 - KRH_04700 - putative ATP-dependent helicase 471 68.75 0 513767..514198 + 143 184200117 - KRH_04710 - hypothetical protein 472 73.83 0 514201..515931 + 576 184200118 - KRH_04720 - hypothetical protein 473 69.76 0 516163..519105 + 980 184200119 topA KRH_04730 - DNA topoisomerase I 474 72.48 0 519194..520174 + 326 184200120 - KRH_04740 - Ppx/GppA phosphatase family protein 475 69.27 0 520171..520977 + 268 184200121 - KRH_04750 - hypothetical protein 476 72.59 0 521042..521497 + 151 184200122 - KRH_04760 - putative acetyltransferase 477 73.81 0 521651..522490 + 279 184200123 proC KRH_04770 - pyrroline-5-carboxylate reductase 478 72.56 0 522487..523623 + 378 184200124 - KRH_04780 - putative glutamate--cysteine ligase 479 69.81 0 523788..524456 - 222 184200125 - KRH_04790 - hypothetical protein 480 68.53 0 524449..525894 - 481 184200126 - KRH_04800 - putative cation transporter 481 70.38 0 526040..527251 + 403 184200127 - KRH_04810 - putative acetoin utilization protein 482 75.40 +1 527339..528472 + 377 184200128 - KRH_04820 - transcription regulator ArsR 483 67.86 0 528512..529852 + 446 184200129 gdhA KRH_04830 - NADP-dependent glutamate dehydrogenase 484 71.84 0 529884..530753 + 289 184200130 - KRH_04840 - GntR family transcriptional regulator 485 58.59 -2 530909..531007 + 32 184200131 - KRH_04850 - hypothetical protein 486 72.44 0 531387..531611 + 74 184200132 - KRH_04860 - hypothetical protein 487 74.26 0 531656..532327 + 223 184200133 - KRH_04870 - phosphoglycerate/bisphosphoglycerate mutase family protein 488 72.02 0 532331..533002 + 223 184200134 resA KRH_04880 - thiol-disulfide oxidoreductase ResA 489 69.30 0 532999..533757 + 252 184200135 ccdA KRH_04890 - cytochrome c-type biogenesis protein CcdA 490 68.44 0 533754..535445 + 563 184200136 resB KRH_04900 - putative cytochrome c biogenesis protein ResB 491 70.69 0 535486..536553 + 355 184200137 resC KRH_04910 - putative cytochrome c biogenesis protein ResC 492 72.46 0 536701..537252 - 183 184200138 - KRH_04920 - hypothetical protein 493 64.16 -1 537541..537819 + 92 184200139 - KRH_04930 - hypothetical protein 494 72.20 0 537826..538710 - 294 184200140 menA KRH_04940 - 1,4-dihydroxy-2-naphthoate octaprenyltransferase 495 74.66 0 538968..539480 - 170 184200141 - KRH_04950 - hypothetical protein 496 75.02 +1 539492..541048 - 518 184200142 menE KRH_04960 - putative o-succinylbenzoate--CoA ligase 497 70.29 0 541057..542022 - 321 184200143 menB KRH_04970 - naphthoate synthase 498 70.31 0 542202..542969 + 255 184200144 - KRH_04980 - hypothetical protein 499 77.62 +1 543004..545778 + 924 184200145 - KRH_04990 - ATP-dependent helicase 500 70.90 0 546271..547215 + 314 184200146 - KRH_05000 - putative citrate lyase beta chain 501 69.25 0 547613..548581 + 322 184200147 ldh KRH_05010 - L-lactate dehydrogenase 502 68.36 0 548686..550224 - 512 184200148 - KRH_05020 - sodium/proline symporter 503 74.17 0 550512..551444 - 310 184200149 - KRH_05030 - glutamyl-tRNA synthetase class Ic family protein 504 70.96 0 551627..552535 + 302 184200150 - KRH_05040 - hypothetical protein 505 76.06 +1 552444..553508 - 354 184200151 - KRH_05050 - hypothetical protein 506 68.74 0 553813..555015 - 400 184200152 - KRH_05060 - putative glutaryl-CoA dehydrogenase 507 71.16 0 555012..556190 - 392 184200153 - KRH_05070 - L-carnitine dehydratase/bile acid-inducible protein F family protein 508 73.38 0 556313..557236 + 307 184200154 - KRH_05080 - LysR family transcriptional regulator 509 67.12 0 557255..558130 - 291 184200155 - KRH_05090 - putative 3-hydroxyacyl-CoA dehydrogenase 510 70.04 0 558127..558957 - 276 184200156 - KRH_05100 - putative enoyl-CoA hydratase 511 70.58 0 558954..561203 - 749 184200157 - KRH_05110 - TRAP family transporter 512 69.07 0 561200..562408 - 402 184200158 - KRH_05120 - TRAP transporter solute receptor TAXI family protein 513 68.79 0 562709..562990 - 93 184200159 - KRH_05130 - hypothetical protein 514 70.09 0 563188..563625 + 145 184200160 - KRH_05140 - hypothetical protein 515 70.63 0 563720..564148 + 142 184200161 - KRH_05150 - cysteine synthase 516 70.50 0 564191..564895 + 234 184200162 - KRH_05160 - cysteine synthase 517 66.67 -1 564633..564818 + 61 184200163 - KRH_05170 - cysteine synthase 518 58.39 -2 564892..565314 - 140 184200164 - KRH_05180 - hypothetical protein 519 63.45 -1 565347..566030 - 227 184200165 - KRH_05190 - hypothetical protein 520 66.67 -1 565646..566854 - 402 184200166 - KRH_05200 - hypothetical protein 521 65.77 -1 566949..567950 - 333 184200167 - KRH_05210 - hypothetical protein 522 63.73 -1 567966..568373 - 135 184200168 - KRH_05220 - hypothetical protein 523 62.01 -2 568589..570154 + 521 184200169 hsdM KRH_05230 - type I restriction enzyme M protein 524 58.81 -2 570151..571347 + 398 184200170 hsdS KRH_05240 - type I restriction enzyme S protein 525 56.60 -2 571344..572078 + 244 184200171 - KRH_05250 - hypothetical protein 526 61.59 -2 572075..575209 + 1044 184200172 hsdR KRH_05260 - type I restriction enzyme R protein 527 51.57 -2 575309..576202 + 297 184200173 - KRH_05270 - hypothetical protein 528 68.92 0 577184..577627 + 147 184200174 - KRH_05280 - Fur family transcriptional regulator 529 65.03 -1 577702..579228 + 508 184200175 katA KRH_05290 - catalase 530 64.74 -1 579654..580121 + 155 184200176 - KRH_05300 - hypothetical protein 531 64.62 -1 580193..580876 - 227 184200177 - KRH_05310 - hypothetical protein 532 65.52 -1 580882..581493 - 203 184200178 - KRH_05320 - hypothetical protein 533 76.04 +1 581777..582790 + 337 184200179 menC KRH_05330 - putative o-succinylbenzoate synthase 534 67.61 0 583109..585334 + 741 184200180 - KRH_05340 - hypothetical protein 535 70.28 0 585635..587293 + 552 184200181 nirA KRH_05350 - putative nitrite/sulfite reductase 536 72.45 0 587290..588153 + 287 184200182 cysH KRH_05360 - phosphoadenosine phosphosulfate reductase 537 71.26 0 588135..589070 + 311 184200183 cysD KRH_05370 - sulfate adenylyltransferase subunit 2 538 72.33 0 589073..590413 + 446 184200184 cysN KRH_05380 - sulfate adenylyltransferase subunit 1 539 75.85 +1 590527..592530 + 667 184200185 menD KRH_05390 - putative menaquinone biosynthesis protein MenD 540 72.90 0 592756..593493 + 245 184200186 - KRH_05400 - putative oxidoreductase 541 68.61 0 593503..594273 - 256 184200187 - KRH_05410 - putative amino acid ABC transporter amino acid-binding protein 542 76.85 +1 594348..595928 - 526 184200188 - KRH_05420 - isochorismate synthase 543 74.84 +1 596084..597355 + 423 184200189 - KRH_05430 - putative oxidoreductase 544 72.06 0 597408..598427 + 339 184200190 - KRH_05440 - putative polyprenyl diphosphate synthase 70.94 MEAN 3.83 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.