version 1.0
Kocuria rhizophila DC2201, complete genome - 1..2697540 2357 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1244 73.81 0 1386799..1387764 + 321 184200890 serB KRH_12440 - phosphoserine phosphatase 1245 71.52 0 1387843..1388625 + 260 184200891 - KRH_12450 - putative ABC transporter ATP-binding protein 1246 70.25 0 1388635..1389555 + 306 184200892 - KRH_12460 - hypothetical protein 1247 71.98 0 1389707..1390534 + 275 184200893 - KRH_12470 - RNA methyltransferase 1248 71.16 0 1390725..1392638 - 637 184200894 - KRH_12480 - subtilisin family peptidase 1249 62.02 -2 1393046..1393303 - 85 184200895 rpmE KRH_12490 - 50S ribosomal protein L31 1250 70.89 0 1393565..1394629 + 354 184200896 - KRH_12500 - putative lipoate-protein ligase 1251 68.44 0 1394668..1395792 + 374 184200897 - KRH_12510 - LytR family regulatory protein 1252 73.52 0 1395964..1397277 + 437 184200898 - KRH_12520 - hypothetical protein 1253 77.78 +1 1397274..1399064 + 596 184200899 - KRH_12530 - putative glycosyltransferase 1254 74.58 0 1398943..1399119 + 58 184200900 - KRH_12540 - hypothetical protein 1255 68.13 0 1399227..1400048 + 273 184200901 - KRH_12550 - putative ABC transporter permease protein 1256 71.28 0 1400197..1401042 + 281 184200902 - KRH_12560 - putative ABC transporter ATP-binding protein 1257 71.67 0 1401039..1402955 + 638 184200903 - KRH_12570 - hypothetical protein 1258 67.15 0 1403038..1404285 + 415 184200904 - KRH_12580 - UDP-N-acetyl-D-mannosamine dehydrogenase 1259 58.25 -2 1404645..1404929 + 94 184200905 - KRH_12590 - hypothetical protein 1260 60.29 -2 1404926..1407592 + 888 184200906 - KRH_12600 - putative glycosyltransferase 1261 61.80 -2 1407667..1409043 - 458 184200907 - KRH_12610 - hypothetical protein 1262 61.03 -2 1409126..1411129 - 667 184200908 - KRH_12620 - hypothetical protein 1263 61.01 -2 1411549..1412979 - 476 184200909 - KRH_12630 - hypothetical protein 1264 62.62 -2 1412972..1415443 - 823 184200910 - KRH_12640 - hypothetical protein 1265 61.19 -2 1415538..1417544 - 668 184200911 - KRH_12650 - hypothetical protein 1266 72.44 0 1417628..1418977 - 449 184200912 rkpK KRH_12660 - UDP-glucose 6-dehydrogenase 1267 68.13 0 1419007..1420164 - 385 184200913 - KRH_12670 - UDP-N-acetylglucosamine 2-epimerase 1268 69.66 0 1420494..1421261 + 255 184200914 - KRH_12680 - hypothetical protein 1269 68.79 0 1421327..1423024 - 565 184200915 - KRH_12690 - hypothetical protein 1270 71.10 0 1423042..1424283 - 413 184200916 - KRH_12700 - hypothetical protein 1271 71.67 0 1424398..1427016 - 872 184200917 pepN KRH_12710 - aminopeptidase N 1272 67.07 -1 1427317..1428561 - 414 184200918 glgC KRH_12720 - glucose-1-phosphate adenylyltransferase 1273 70.44 0 1428902..1430095 + 397 184200919 - KRH_12730 - putative glycosyltransferase 1274 71.10 0 1430276..1430929 - 217 184200920 - KRH_12740 - TetR family transcriptional regulator 1275 69.59 0 1431012..1432139 + 375 184200921 - KRH_12750 - hypothetical protein 1276 70.19 0 1432787..1433155 + 122 184200922 - KRH_12760 - hypothetical protein 1277 71.96 0 1433361..1433738 + 125 184200923 - KRH_12770 - hypothetical protein 1278 65.32 -1 1433830..1434126 + 98 184200924 - KRH_12780 - hypothetical protein 1279 71.78 0 1434415..1435470 - 351 184200925 trpD KRH_12790 - anthranilate phosphoribosyltransferase 1280 62.60 -2 1435649..1436287 + 212 184200926 ctaE KRH_12800 - cytochrome c oxidase subunit III 1281 66.54 -1 1436346..1437137 + 263 184200927 qcrC KRH_12810 - menaquinol-cytochrome c reductase cytochrome c subunit 1282 65.94 -1 1437196..1438302 + 368 184200928 qcrA KRH_12820 - menaquinol-cytochrome c reductase iron-sulfur subunit 1283 66.25 -1 1438302..1439969 + 555 184200929 qcrB KRH_12830 - menaquinol-cytochrome c reductase cytochrome b subunit 1284 66.42 -1 1441320..1441724 - 134 184200930 - KRH_12840 - hypothetical protein 1285 63.47 -1 1441721..1443442 - 573 184200931 ctaD KRH_12850 - cytochrome c oxidase subunit I 1286 63.20 -2 1443453..1444259 - 268 184200932 ctaC KRH_12860 - cytochrome c oxidase subunit II precursor 1287 67.48 0 1444588..1444956 - 122 184200933 iscA KRH_12870 - putative iron-sulfur cluster assembly protein IscA 1288 73.60 0 1445043..1446455 - 470 184200934 - KRH_12880 - peptidase M20A family protein 1289 71.14 0 1446536..1447138 + 200 184200935 - KRH_12890 - hypothetical protein 1290 72.62 0 1447312..1448403 - 363 184200936 pyrD KRH_12900 - dihydroorotate dehydrogenase 1291 71.09 0 1448581..1449372 - 263 184200937 uppS KRH_12910 - undecaprenyl pyrophosphate synthase 1292 73.65 0 1449454..1450212 - 252 184200938 recO KRH_12920 - DNA repair protein RecO 1293 68.21 0 1450506..1452260 - 584 184200939 leuA KRH_12930 - 2-isopropylmalate synthase 1294 72.91 0 1452431..1454032 - 533 184200940 - KRH_12940 - LytR family regulatory protein 1295 71.73 0 1454102..1455148 - 348 184200941 era KRH_12950 - GTP-binding protein Era 1296 72.78 0 1455201..1455707 - 168 184200942 - KRH_12960 - hypothetical protein 1297 70.99 0 1455704..1456813 - 369 184200943 - KRH_12970 - PhoH-like protein 1298 72.77 0 1456856..1458052 + 398 184200944 - KRH_12980 - hypothetical protein 1299 76.77 +1 1458351..1459112 - 253 184200945 - KRH_12990 - hypothetical protein 1300 70.87 0 1459109..1460251 - 380 184200946 dnaJ KRH_13000 - chaperone protein DnaJ 1301 72.78 0 1460318..1461331 - 337 184200947 hrcA KRH_13010 - heat-inducible transcription repressor HrcA 1302 73.49 0 1461506..1462384 + 292 184200948 - KRH_13020 - hypothetical protein 1303 70.67 0 1462554..1462928 + 124 184200949 - KRH_13030 - hypothetical protein 1304 73.25 0 1463016..1464260 - 414 184200950 hemN KRH_13040 - putative oxygen-independent coproporphyrinogen III oxidase 1305 66.88 -1 1464260..1466116 - 618 184200951 lepA KRH_13050 - GTP-binding protein LepA 1306 75.04 +1 1466201..1466797 + 198 184200952 - KRH_13060 - hypothetical protein 1307 61.30 -2 1467094..1467354 + 86 184200953 rpsT KRH_13070 - 30S ribosomal protein S20 1308 69.89 0 1467371..1467556 - 61 184200954 - KRH_13080 - hypothetical protein 1309 72.19 0 1467614..1468627 - 337 184200955 holA KRH_13090 - DNA polymerase III delta subunit 1310 73.77 0 1468978..1470075 - 365 184200956 - KRH_13100 - NADH--flavin oxidoreductase 1311 74.95 +1 1470227..1472968 - 913 184200957 - KRH_13110 - putative ComEC/Rec2-related protein 1312 73.73 0 1472965..1473984 - 339 184200958 - KRH_13120 - putative DNA-binding protein 1313 54.49 -2 1474684..1474839 + 51 184200959 - KRH_13130 - hypothetical protein 1314 46.93 -2 1475248..1477740 - 830 184200960 - KRH_13140 - hypothetical protein 1315 64.58 -1 1477774..1478781 - 335 184200961 - KRH_13150 - putative transposase 1316 74.53 0 1479119..1480339 - 406 184200962 - KRH_13160 - hypothetical protein 1317 70.65 0 1480339..1482849 - 836 184200963 leuS KRH_13170 - leucyl-tRNA synthetase 1318 69.51 0 1483032..1484087 + 351 184200964 - KRH_13180 - putative hydrolase 1319 73.55 0 1484084..1485187 + 367 184200965 - KRH_13190 - putative glycosyltransferase 1320 72.56 0 1485650..1486531 - 293 184200966 - KRH_13200 - putative ABC transporter permease protein 1321 71.08 0 1486528..1487706 - 392 184200967 - KRH_13210 - putative ABC transporter substrate-binding protein 1322 70.78 0 1487703..1488407 - 234 184200968 - KRH_13220 - putative ABC transporter ATP-binding protein 1323 73.39 0 1488470..1489555 - 361 184200969 - KRH_13230 - hypothetical protein 1324 65.93 -1 1489643..1490182 - 179 184200970 - KRH_13240 - hypothetical protein 1325 74.40 0 1490436..1492841 - 801 184200971 priA KRH_13250 - putative primosomal protein N' 1326 69.49 0 1492838..1494043 - 401 184200972 metK KRH_13260 - S-adenosylmethionine synthetase 1327 75.97 +1 1494053..1495471 - 472 184200973 coaBC KRH_13270 - putative phosphopantothenoylcysteine decarboxylase/phosphopantothenoylcysteine synthase 1328 65.82 -1 1495468..1495938 - 156 184200974 rpoZ KRH_13280 - DNA-directed RNA polymerase omega subunit 1329 69.70 0 1496012..1496638 - 208 184200975 gmk KRH_13290 - guanylate kinase 1330 71.75 0 1496674..1496988 - 104 184200976 - KRH_13300 - hypothetical protein 1331 75.99 +1 1497158..1498069 - 303 184200977 pyrF KRH_13310 - orotidine 5'-phosphate decarboxylase 1332 69.89 0 1498206..1501526 - 1106 184200978 carB KRH_13320 - carbamoyl-phosphate synthase large chain 1333 71.56 0 1501526..1502710 - 394 184200979 carA KRH_13330 - carbamoyl-phosphate synthase small chain 1334 72.82 0 1502776..1503279 - 167 184200980 - KRH_13340 - hypothetical protein 1335 74.07 0 1503304..1504614 - 436 184200981 pyrC KRH_13350 - dihydroorotase 1336 71.52 0 1504622..1505611 - 329 184200982 pyrB KRH_13360 - aspartate carbamoyltransferase 1337 73.54 0 1505602..1506285 - 227 184200983 pyrR KRH_13370 - PyrR bifunctional protein 1338 70.74 0 1506400..1506816 - 138 184200984 nusB KRH_13380 - antitermination factor NusB 1339 64.01 -1 1506813..1507376 - 187 184200985 efp KRH_13390 - elongation factor P 1340 70.44 0 1507497..1508582 - 361 184200986 aroB KRH_13400 - 3-dehydroquinate synthase 1341 73.30 0 1508579..1509136 - 185 184200987 aroK KRH_13410 - shikimate kinase 1342 74.58 0 1509133..1510383 - 416 184200988 aroC KRH_13420 - chorismate synthase 1343 77.24 +1 1510523..1511449 - 308 184200989 aroE KRH_13430 - shikimate dehydrogenase 70.94 MEAN 3.83 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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