IslandPathversion 1.0

IslandPath Analysis: Klebsiella pneumoniae subsp. pneumoniae MGH 78578



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 57.88 STD DEV: 5.81
Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome - 1..5315120
4776 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
492	 57.28	0	553734..554159	-	141	152969074	-	KPN_00503	-	hypothetical protein
493	 62.98	0	554731..555651	+	306	152969075	-	KPN_00504	-	hypothetical protein
494	 62.06	0	555648..556820	+	390	152969076	-	KPN_00505	-	putative oxidoreductase
495	 64.83	+1	556830..557861	+	343	152969077	-	KPN_00506	-	putative oxidoreductase
496	 66.07	+1	558667..559674	-	335	152969078	-	KPN_00507	-	putative oxidoreductase
497	 65.59	+1	559776..560795	+	339	152969079	-	KPN_00508	-	hypothetical protein
498	 55.30	0	561225..562148	+	307	152969080	-	KPN_00509	-	putative periplasmic binding protein
499	 56.36	0	562181..563665	+	494	152969081	-	KPN_00510	-	putative ABC transporter
500	 59.14	0	563685..564707	+	340	152969082	-	KPN_00511	-	putative inner-membrane translocator
501	 62.99	0	565547..566551	-	334	152969083	-	KPN_00512	-	LacI transcriptional regulator
502	 65.60	+1	566581..567981	-	466	152969084	-	KPN_00513	-	beta-fructofuranosidase; sucrose-6-phosphate hydrolase
503	 61.27	0	567981..569351	-	456	152969085	-	KPN_00514	-	sucrose-specific enzyme II
504	 60.14	0	569456..570973	-	505	152969086	-	KPN_00515	-	sucrose porin
505	 67.75	+1	571138..572061	-	307	152969087	-	KPN_00516	-	aminoimidazole riboside kinase
506	 60.89	0	573421..574563	+	380	152969088	-	KPN_00517	-	putative secretion protein HlyD
507	 65.29	+1	574604..575401	-	265	152969089	-	KPN_00518	-	putative ABC transporter
508	 63.62	0	575398..576480	-	360	152969090	-	KPN_00519	-	putative ABC transporter permease
509	 60.05	0	576488..577606	-	372	152969091	-	KPN_00520	-	putative periplasmic binding protein
510	 53.33	0	577878..578267	+	129	152969092	-	KPN_00521	-	hypothetical protein
511	 51.59	-1	578967..579092	-	41	152969093	-	KPN_00522	-	hypothetical protein
512	 59.37	0	579408..580586	+	392	152969094	-	KPN_00523	-	aminobenzoyl-glutamate utilization protein
513	 56.99	0	580639..581382	+	247	152969095	-	KPN_00524	-	extracellular solute-binding family protein 3
514	 62.16	0	581511..582464	+	317	152969096	-	KPN_00525	-	putative aldo/keto reductase
515	 68.60	+1	584069..584845	-	258	152969097	-	KPN_00526	-	putative 3-ketoacyl-(acyl-carrier-protein) reductase
516	 60.33	0	584933..586651	-	572	152969098	-	KPN_00527	-	putative arylsulfatase
517	 62.46	0	586711..587898	-	395	152969099	-	KPN_00528	-	putative iron-sulfur modifier protein
518	 57.92	0	588459..589007	+	182	152969100	-	KPN_00529	-	LuxR transcriptional regulator
519	 63.53	0	590348..591463	+	371	152969101	-	KPN_00530	-	putative deacetylase
520	 61.45	0	591470..592063	-	197	152969102	-	KPN_00531	-	hypothetical protein
521	 62.87	0	592041..593540	-	499	152969103	-	KPN_00532	-	putative amino acid/amine transport protein
522	 62.57	0	593917..594282	-	121	152969104	-	KPN_00533	-	hypothetical protein
523	 58.60	0	594296..595597	-	433	152969105	-	KPN_00534	-	hypothetical protein
524	 63.03	0	595756..597240	+	494	152969106	-	KPN_00535	-	putative aldehyde dehydrogenase
525	 59.11	0	598764..600974	+	736	152969107	-	KPN_00536	-	putative TonB-dependent receptor
526	 59.62	0	601082..602458	+	458	152969108	-	KPN_00537	-	phenylalanine transporter
527	 59.66	0	602610..603851	+	413	152969109	-	KPN_00538	-	putative nucleoside H+ symporter
528	 63.25	0	603868..604890	+	340	152969110	-	KPN_00539	-	putative xylose isomerase-like TIM barrel
529	 63.79	+1	604862..606043	+	393	152969111	-	KPN_00540	-	putative NADH-dependent dehydrogenase
530	 59.13	0	606063..606500	-	145	152969112	-	KPN_00541	-	hypothetical protein
531	 62.49	0	606728..607708	+	326	152969113	-	KPN_00542	-	LacI transcriptional regulator
532	 55.90	0	607712..608956	-	414	152969114	ybdG	KPN_00543	-	putative transport
533	 64.94	+1	610563..611429	+	288	152969115	-	KPN_00544	-	hypothetical protein
534	 61.74	0	612096..613130	+	344	152969116	-	KPN_00545	-	putative permease
535	 51.58	-1	613227..615956	+	909	152969117	-	KPN_00546	-	putative inner membrane protein
536	 54.31	0	616009..616995	-	328	152969118	-	KPN_00547	-	putative phosphosugar isomerases
537	 55.93	0	617060..618121	-	353	152969119	-	KPN_00548	-	putative inner membrane protein
538	 56.26	0	618139..618993	-	284	152969120	-	KPN_00549	-	putative transport protein, PTS system
539	 56.32	0	618996..619739	-	247	152969121	-	KPN_00550	-	putative inner membrane protein
540	 53.29	0	619754..620224	-	156	152969122	-	KPN_00551	-	putative transport protein, PTS system
541	 53.56	0	620217..620651	-	144	152969123	-	KPN_00552	-	putative transport protein, PTS system
542	 57.65	0	620899..621552	-	217	152969124	nfnB	KPN_00553	-	dihydropteridine reductase
543	 56.37	0	621672..622040	-	122	152969125	ybdF	KPN_00554	-	hypothetical protein
544	 61.17	0	622040..622621	-	193	152969126	-	KPN_00555	-	putative regulatory protein
545	 55.26	0	623947..624288	+	113	152969127	-	KPN_00556	-	putative regulatory protein
546	 57.83	0	624306..624554	-	82	152969128	ybdJ	KPN_00557	-	putative inner membrane protein
547	 50.45	-1	624744..624854	-	36	152969129	-	KPN_00558	-	hypothetical protein
548	 62.65	0	625066..627780	+	904	152969130	-	KPN_00559	-	Mg2+ transport ATPase, P-type 1
549	 66.48	+1	627833..628912	+	359	152969131	-	KPN_00560	-	putative secretion protein HlyD
550	 65.92	+1	628926..632018	+	1030	152969132	-	KPN_00561	-	putative acridine efflux pump
551	 61.67	0	632367..633086	-	239	152969133	-	KPN_00562	-	hypothetical protein
552	 62.28	0	633134..634249	-	371	152969134	-	KPN_00563	-	carboxylate-amine ligase
553	 61.93	0	634576..636243	+	555	152969135	-	KPN_00564	-	extracellular solute-binding family protein 5
554	 62.89	0	636262..637215	+	317	152969136	-	KPN_00565	-	putative binding-protein-dependent transport systems inner membrane component
555	 63.53	0	637218..638111	+	297	152969137	-	KPN_00566	-	putative binding-protein-dependent transport systems inner membrane component
556	 64.64	+1	638115..639152	+	345	152969138	-	KPN_00567	-	putative ABC transporter
557	 67.66	+1	639142..640152	+	336	152969139	-	KPN_00568	-	putative ABC transport system ATP-binding protein
558	 64.70	+1	640250..641518	+	422	152969140	-	KPN_00569	-	putative amidohydrolase
559	 65.39	+1	642655..643989	+	444	152969141	-	KPN_00570	-	aminotransferase regulator domain-containing protein
560	 63.59	0	643986..645545	-	519	152969142	-	KPN_00571	-	GntR transcriptional regulator
561	 54.87	0	645712..646542	+	276	152969143	-	KPN_00572	-	glutamine ABC transporter periplasmic-binding protein
562	 61.06	0	646590..647231	+	213	152969144	-	KPN_00573	-	putative binding-protein-dependent transport systems inner membrane component
563	 50.30	-1	647246..647911	+	221	152969145	-	KPN_00574	-	putative binding-protein-dependent transport systems inner membrane component
564	 58.66	0	647904..648665	+	253	152969146	-	KPN_00575	-	putative ABC transporter
565	 63.53	0	648719..649483	-	254	152969147	-	KPN_00576	-	putative oxidoreductase
566	 63.83	+1	649664..651001	+	445	152969148	-	KPN_00577	-	hypothetical protein
567	 63.40	0	651248..651952	-	234	152969149	-	KPN_00578	-	putative ATP-binding component of a transport system
568	 67.14	+1	651939..652775	-	278	152969150	-	KPN_00579	-	putative ABC transporter
569	 68.59	+1	652768..653601	-	277	152969151	-	KPN_00580	-	putative ABC transport system permease protein
570	 64.52	+1	653601..654623	-	340	152969152	-	KPN_00581	-	putative ABC transport system permease protein
571	 60.04	0	654743..656311	-	522	152969153	-	KPN_00582	-	putative ABC transport system periplasmic binding protein
572	 63.82	+1	656511..657212	+	233	152969154	-	KPN_00583	-	putative GCN5-related N-acetyltransferase
573	 63.24	0	657333..658997	-	554	152969155	-	KPN_00584	-	choline dehydrogenase
574	 62.57	0	659011..660474	-	487	152969156	-	KPN_00585	-	betaine aldehyde dehydrogenase
575	 62.21	0	660497..661102	-	201	152969157	-	KPN_00586	-	transcriptional regulator BetI
576	 59.83	0	661213..663246	+	677	152969158	-	KPN_00587	-	choline transport protein BetT
577	 53.46	0	663963..665219	+	418	152969159	-	KPN_00588	-	putative transport
578	 66.78	+1	665216..666109	-	297	152969160	-	KPN_00589	-	transcriptional regulator LysR
579	 62.87	0	666364..666969	+	201	152969161	-	KPN_00590	-	putative S-transferase
580	 59.80	0	667028..668527	-	499	152969162	-	KPN_00591	-	putative carbohydrate kinase
581	 56.90	0	668542..669933	-	463	152969163	-	KPN_00592	-	putative L-fucose isomerase, C-terminal
582	 59.41	0	669995..670945	-	316	152969164	-	KPN_00593	-	putative transketolase C-terminal section
583	 56.80	0	670938..671768	-	276	152969165	-	KPN_00594	-	putative transketolase
584	 56.80	0	672038..673030	+	330	152969166	-	KPN_00595	-	putative sugar-binding region
585	 55.24	0	673027..673989	-	320	152969167	-	KPN_00596	-	putative transposase, YhgA-like protein
586	 56.20	0	674145..675233	-	362	152969168	-	KPN_00597	-	putative inner-membrane translocator
587	 55.99	0	675235..676761	-	508	152969169	-	KPN_00598	-	putative ABC transporter
588	 58.66	0	676761..677372	-	203	152969170	-	KPN_00599	-	hypothetical protein
589	 54.26	0	677380..678282	-	300	152969171	-	KPN_00600	-	D-ribose periplasmic binding protein
590	 63.33	0	678439..679098	-	219	152969172	entD	KPN_00601	-	enterochelin synthetase, component D
591	 59.89	0	679165..681393	-	742	152969173	fepA	KPN_00602	-	outer membrane receptor FepA
57.88	MEAN

5.81	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.