IslandPath Analysis: Klebsiella pneumoniae subsp. pneumoniae MGH 78578



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 57.88   STD DEV: 5.81
Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome - 1..5315120
4776 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1288	 57.28	0	1477764..1478072	+	102	152969870	-	KPN_01317	-	hypothetical protein
1289	 63.93	+1	1478632..1479546	-	304	152969871	-	KPN_01318	-	LysR family transcriptional regulator
1290	 60.68	0	1479689..1480423	+	244	152969872	-	KPN_01319	-	7-alpha-hydroxysteroid dehydrogenase
1291	 41.88	-2	1480640..1482172	+	510	152969873	-	KPN_01320	-	metal-dependent phosphohydrolase
1292	 61.02	0	1482371..1482919	-	182	152969874	-	KPN_01321	-	putative intracellular protease/amidase
1293	 48.98	-1	1483578..1484069	+	163	152969875	-	KPN_01322	-	hypothetical protein
1294	 59.96	0	1484106..1485656	+	516	152969876	-	KPN_01323	-	hypothetical protein
1295	 61.90	0	1485666..1487009	+	447	152969877	-	KPN_01324	-	hypothetical protein
1296	 62.17	0	1487006..1487695	+	229	152969878	-	KPN_01325	-	hypothetical protein
1297	 65.08	+1	1487692..1489398	+	568	152969879	-	KPN_01326	-	putative outer membrane protein
1298	 52.64	0	1489403..1489894	+	163	152969880	-	KPN_01327	-	hypothetical protein
1299	 64.24	+1	1490213..1492813	+	866	152969881	-	KPN_01328	-	putative protease
1300	 60.48	0	1492806..1495325	+	839	152969882	-	KPN_01329	-	hypothetical protein
1301	 38.04	-2	1495318..1496529	+	403	152969883	-	KPN_01330	-	hypothetical protein
1302	 34.07	-2	1496534..1496938	+	134	152969884	-	KPN_01331	-	hypothetical protein
1303	 32.35	-2	1496928..1497029	+	33	152969885	-	KPN_01332	-	hypothetical protein
1304	 31.75	-2	1497333..1497584	+	83	152969886	-	KPN_01333	-	hypothetical protein
1305	 42.87	-2	1497730..1499490	+	586	152969887	-	KPN_01334	-	putative membrane proteins
1306	 29.50	-2	1499487..1499747	+	86	152969888	-	KPN_01335	-	hypothetical protein
1307	 33.98	-2	1499734..1500501	+	255	152969889	-	KPN_01336	-	hypothetical protein
1308	 53.33	0	1501395..1501784	+	129	152969890	-	KPN_01337	-	putative transposase-related protein
1309	 49.90	-1	1502017..1502493	+	158	152969891	-	KPN_01338	-	putative transposase-related protein
1310	 33.63	-2	1502858..1503199	+	113	152969892	-	KPN_01339	-	maltose transport system permease protein
1311	 31.11	-2	1503379..1503513	+	44	152969893	-	KPN_01340	-	hypothetical protein
1312	 45.91	-2	1503939..1505147	+	402	152969894	-	KPN_01341	-	putative structural protein
1313	 60.21	0	1505225..1508599	+	1124	152969895	-	KPN_01342	-	hypothetical protein
1314	 56.10	0	1508599..1510197	+	532	152969896	-	KPN_01343	-	hypothetical protein
1315	 42.14	-2	1510228..1511283	+	351	152969897	-	KPN_01344	-	hypothetical protein
1316	 35.88	-2	1511280..1511750	+	156	152969898	-	KPN_01345	-	hypothetical protein
1317	 53.87	0	1511844..1512812	-	322	152969899	-	KPN_01346	-	putative transposase, IS4
1318	 59.37	0	1512893..1514647	+	584	152969900	-	KPN_01347	-	hypothetical protein
1319	 50.00	-1	1516265..1516324	-	19	152969901	-	KPN_01348	-	hypothetical protein
1320	 60.16	0	1516455..1516838	+	127	152969902	-	KPN_01349	-	hypothetical protein
1321	 64.29	+1	1516905..1517618	-	237	152969903	-	KPN_01350	-	oxidoreductase
1322	 65.49	+1	1517692..1518285	+	197	152969904	-	KPN_01351	-	putative regulatory protein  TetR
1323	 65.61	+1	1518290..1519045	-	251	152969905	yghA	KPN_01352	-	oxidoreductase
1324	 65.42	+1	1519204..1520082	+	292	152969906	yqhC	KPN_01353	-	putative ARAC-type regulatory protein
1325	 62.90	0	1520365..1521294	-	309	152969907	-	KPN_01354	-	putative 2'-hydroxyisoflavone reductase
1326	 64.57	+1	1521433..1522338	+	301	152969908	yhjC	KPN_01355	-	LysR family transcriptional regulator
1327	 63.20	0	1522358..1523281	-	307	152969909	-	KPN_01356	-	transcriptional regulator LysR
1328	 61.81	0	1523354..1524238	+	294	152969910	-	KPN_01357	-	hypothetical protein
1329	 66.56	+1	1524231..1525142	+	303	152969911	-	KPN_01358	-	hypothetical protein
1330	 67.40	+1	1525199..1525747	-	182	152969912	-	KPN_01359	-	putative regulatory protein  TetR
1331	 66.47	+1	1525836..1526870	+	344	152969913	-	KPN_01360	-	zinc-containing alcohol dehydrogenase superfamily protein
1332	 62.07	0	1526915..1528090	-	391	152969914	-	KPN_01361	-	putative aminotransferase
1333	 51.80	-1	1528311..1529117	+	268	152969915	-	KPN_01362	-	putative lipoprotein
1334	 54.78	0	1529114..1530139	+	341	152969916	-	KPN_01363	-	putative ABC transporter
1335	 62.18	0	1530132..1530800	+	222	152969917	-	KPN_01364	-	putative binding-protein-dependent transport systems inner membrane component
1336	 63.92	+1	1530829..1532067	-	412	152969918	-	KPN_01365	-	aromatic amino acid aminotransferase
1337	 59.02	0	1532067..1532681	-	204	152969919	-	KPN_01366	-	hypothetical protein
1338	 58.33	0	1532933..1533412	-	159	152969920	-	KPN_01367	-	regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system
1339	 60.29	0	1533747..1535126	+	459	152969921	-	KPN_01368	-	aromatic amino acid transport protein
1340	 52.88	0	1535377..1536123	+	248	152969922	-	KPN_01369	-	hypothetical protein
1341	 45.64	-2	1536236..1536430	-	64	152969923	-	KPN_01370	-	hypothetical protein
1342	 62.83	0	1536667..1537761	-	364	152969924	-	KPN_01371	-	putative oxidoreductase
1343	 62.53	0	1537748..1538497	-	249	152969925	-	KPN_01372	-	DeoR transcriptional regulator
1344	 61.08	0	1538771..1539754	+	327	152969926	ydaN	KPN_01373	-	zinc transporter
1345	 62.52	0	1540280..1541653	+	457	152969927	dbpA	KPN_01374	-	ATP-dependent RNA helicase DbpA
1346	 55.66	0	1541699..1542634	-	311	152969928	ydaO	KPN_01375	-	C32 tRNA thiolase
1347	 46.25	-2	1542683..1543921	-	412	152969929	-	KPN_01376	-	putative transposase/integrase
1348	 46.01	-2	1543922..1544134	-	70	152969930	-	KPN_01377	-	putative excisionase
1349	 55.56	0	1544199..1544459	-	86	152969931	-	KPN_01378	-	hypothetical protein
1350	 58.58	0	1544446..1544754	-	102	152969932	-	KPN_01379	-	hypothetical protein
1351	 53.27	0	1544751..1545362	-	203	152969933	-	KPN_01380	-	hypothetical protein
1352	 50.48	-1	1545355..1545564	-	69	152969934	-	KPN_01381	-	hypothetical protein
1353	 50.20	-1	1545742..1546743	-	333	152969935	-	KPN_01382	-	putative entero exodeoxyribonuclease VIII
1354	 53.58	0	1546756..1549872	-	1038	152969936	-	KPN_01383	-	putative entero exodeoxyribonuclease VIII
1355	 53.50	0	1550010..1550366	-	118	152969937	-	KPN_01384	-	hypothetical protein
1356	 47.57	-1	1550662..1550970	-	102	152969938	-	KPN_01385	-	regulatory protein
1357	 38.51	-2	1551505..1551678	-	57	152969939	-	KPN_01386	-	hypothetical protein
1358	 39.21	-2	1551714..1552598	-	294	152969940	-	KPN_01387	-	hypothetical protein
1359	 56.56	0	1553547..1554011	+	154	152969941	-	KPN_01388	-	hypothetical protein
1360	 53.46	0	1554141..1554935	+	264	152969942	-	KPN_01389	-	hypothetical protein
1361	 51.69	-1	1554953..1555840	+	295	152969943	-	KPN_01390	-	hypothetical protein
1362	 54.00	0	1555843..1556592	+	249	152969944	-	KPN_01391	-	putative replication protein
1363	 47.26	-1	1556965..1557165	+	66	152969945	-	KPN_01392	-	hypothetical protein
1364	 47.62	-1	1557162..1557413	+	83	152969946	-	KPN_01393	-	hypothetical protein
1365	 52.22	0	1557410..1557679	+	89	152969947	-	KPN_01394	-	hypothetical protein
1366	 58.06	0	1557676..1559535	+	619	152969948	-	KPN_01395	-	putative site-specific DNA methylase
1367	 45.27	-2	1559689..1560132	+	147	152969949	-	KPN_01396	-	putative N-acetyltransferase
1368	 43.94	-2	1560133..1560264	+	43	152969950	-	KPN_01397	-	hypothetical protein
1369	 49.15	-1	1560612..1560845	+	77	152969951	-	KPN_01398	-	hypothetical protein
1370	 51.59	-1	1560881..1561477	+	198	152969952	-	KPN_01399	-	hypothetical protein
1371	 51.30	-1	1561979..1562323	+	114	152969953	-	KPN_01400	-	hypothetical protein
1372	 51.72	-1	1562496..1563251	+	251	152969954	-	KPN_01401	-	putative antitermination protein
1373	 43.15	-2	1563626..1564012	-	128	152969955	-	KPN_01402	-	hypothetical protein
1374	 49.49	-1	1564704..1565099	+	131	152969956	-	KPN_01403	-	hypothetical protein
1375	 51.42	-1	1565086..1565367	+	93	152969957	-	KPN_01404	-	hypothetical protein
1376	 54.70	0	1565367..1565993	+	208	152969958	-	KPN_01405	-	putative glycoside hydrolase
1377	 55.93	0	1566001..1566177	+	58	152969959	-	KPN_01406	-	hypothetical protein
1378	 39.34	-2	1566199..1566381	-	60	152969960	-	KPN_01407	-	hypothetical protein
1379	 46.63	-1	1567215..1567733	+	172	152969961	-	KPN_01408	-	hypothetical protein
1380	 39.95	-2	1567798..1568175	-	125	152969962	-	KPN_01409	-	hypothetical protein
1381	 47.92	-1	1568492..1568635	+	47	152969963	-	KPN_01410	-	hypothetical protein
1382	 38.38	-2	1569160..1569654	-	164	152969964	-	KPN_01411	-	hypothetical protein
1383	 55.22	0	1569749..1570753	+	334	152969965	-	KPN_01412	-	hypothetical protein
1384	 52.34	0	1570731..1572035	+	434	152969966	-	KPN_01413	-	hypothetical protein
1385	 52.42	0	1572040..1573464	+	474	152969967	-	KPN_01414	-	hypothetical protein
1386	 54.09	0	1573535..1574560	+	341	152969968	-	KPN_01415	-	hypothetical protein
1387	 52.29	0	1574667..1575431	+	254	152969969	-	KPN_01416	-	hypothetical protein
57.88	MEAN

5.81	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.