version 1.0
Janthinobacterium sp. Marseille, complete genome - 1..4110251 3697 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 512 57.20 0 573632..575026 - 464 152980454 pbuX2 mma_0512 - xanthine permease 513 54.91 0 575271..576206 - 311 152982787 - mma_0513 - LysR family transcriptional regulator 514 54.69 0 576579..577814 + 411 152981072 - mma_0514 - hypothetical protein 515 56.77 0 577863..579488 + 541 152979924 hutH mma_0515 - histidine ammonia-lyase 516 52.88 0 579597..580691 - 364 152981709 - mma_0516 - porin 517 56.99 0 580817..581767 - 316 152981727 - mma_0517 - polysaccharide deacetylase family protein 518 54.06 0 581955..582311 + 118 152981524 - mma_0518 - transthyretin-like protein 519 56.31 0 582357..584288 - 643 152982241 - mma_0519 - two component sensor histidine kinase 520 54.13 0 584576..588412 + 1278 152981624 - mma_0520 - autotransporter 521 55.01 0 588438..591209 + 923 152981607 - mma_0521 - outer membrane autotransporter 522 57.19 0 591219..593318 + 699 152982107 - mma_0522 - hypothetical protein 523 55.56 0 593327..593938 + 203 152980747 cysC mma_0523 - adenylylsulfate kinase 524 48.40 -1 594033..594251 - 72 152982460 - mma_0524 - hypothetical protein 525 58.59 0 594410..595573 - 387 152980092 cfa1 mma_0525 - cyclopropane fatty acyl phospholipid synthase 526 59.14 +1 595760..596623 + 287 152982688 - mma_0526 - LysR family transcriptional regulator 527 57.25 0 596787..598454 + 555 152981373 aer mma_0527 - aerotaxis sensor receptor (chemotaxis transducer) transmembrane protein 528 57.26 0 598777..600318 + 513 152981130 - mma_0528 - ATP-dependent RNA helicase 529 56.24 0 600385..601266 - 293 152980417 - mma_0529 - glutamyl-tRNA synthetase related protein 530 59.37 +1 601270..602187 - 305 152982198 - mma_0530 - LysR family transcriptional regulator 531 54.08 0 602311..603009 + 232 152981404 - mma_0531 - pirin-related protein 532 54.26 0 603076..603921 - 281 152980539 kdsA mma_0532 - 2-dehydro-3-deoxyphosphooctonate aldolase 533 55.83 0 603997..604836 - 279 152981253 - mma_0533 - hypothetical protein 534 55.25 0 605048..608506 + 1152 152980633 dnaE1 mma_0534 - DNA polymerase III alpha subunit 535 53.94 0 608549..610285 + 578 152982174 msbA mma_0535 - ABC-type multidrug transport system, ATPase and permease components 536 53.86 0 610326..611090 + 254 152982713 - mma_0536 - hypothetical protein 537 55.05 0 611167..612630 - 487 152980616 cafA mma_0537 - ribonuclease G (RNAse G) (cytoplasmic axial filament protein) 538 56.36 0 612627..613247 - 206 152981387 maf1 mma_0538 - nucleotide-binding protein implicated in inhibition of septum formation 539 56.69 0 613255..613725 - 156 152981375 - mma_0539 - SPOUT methyltransferase superfamily protein 540 56.41 0 613738..614400 - 220 152982104 - mma_0540 - hypothetical protein 541 54.61 0 614400..615071 - 223 152980100 nadD mma_0541 - nicotinate-nucleotide adenylyltransferase 542 56.96 0 615073..616071 - 332 152979898 hemF mma_0542 - coproporphyrinogen III oxidase 543 57.63 0 616114..617385 - 423 152979938 purD mma_0543 - phosphoribosylamine--glycine ligase 544 56.47 0 617509..618234 - 241 152981153 - mma_0544 - hypothetical protein 545 55.64 0 618325..619830 + 501 152981573 - mma_0545 - hypothetical protein 546 58.42 0 619889..620797 - 302 152982816 - mma_0546 - LysR family transcriptional regulator 547 53.01 0 620972..621586 + 204 152980412 acpD1 mma_0547 - acyl carrier protein phosphodiesterase 548 57.43 0 621672..622310 + 212 152980494 ribA mma_0548 - GTP cyclohydrolase II 549 53.31 0 622385..623290 + 301 152982668 - mma_0549 - transporter of the DMT superfamily 550 59.87 +1 623300..624079 + 259 152982386 - mma_0550 - short chain dehydrogenase/reductase family oxidoreductase 551 57.95 0 624114..625088 + 324 152980998 qor2 mma_0551 - NADPH2:quinone reductase 552 52.43 0 625323..625940 - 205 152982450 - mma_0552 - hypothetical protein 553 57.14 0 626182..628836 + 884 152980567 pepN mma_0553 - aminopeptidase N 554 55.62 0 628927..629931 + 334 152979833 fbp mma_0554 - fructose-1,6-bisphosphatase I 555 53.66 0 636336..637511 + 391 152980194 atoB mma_0555 - acetyl-CoA C-acetyltransferase 556 53.98 0 637556..638296 + 246 152981402 phbB mma_0556 - acetoacetyl-CoA reductase 557 53.68 0 638354..638992 - 212 152981446 - mma_0557 - hypothetical protein 558 55.95 0 639049..639636 - 195 152979979 - mma_0558 - hypothetical protein 559 56.31 0 639689..639910 - 73 152983202 - mma_0559 - hypothetical protein 560 57.88 0 639940..640212 - 90 152982712 - mma_0560 - hypothetical protein 561 54.26 0 640244..640630 - 128 152981837 - mma_0561 - hypothetical protein 562 57.79 0 640729..642159 - 476 152980617 sbcB mma_0562 - exonuclease I 563 57.76 0 642196..643161 - 321 152982877 - mma_0563 - hypothetical protein 564 54.34 0 643171..644046 - 291 152981680 - mma_0564 - signal transduction protein 565 56.07 0 644043..644363 - 106 152982592 - mma_0565 - hypothetical protein 566 54.03 0 644545..645810 - 421 152982756 - mma_0566 - hypothetical protein 567 53.44 0 645888..646280 - 130 152981506 - mma_0567 - hypothetical protein 568 52.84 0 646352..646756 - 134 152982746 - mma_0568 - hypothetical protein 569 55.50 0 646943..647587 - 214 152981789 rhtB mma_0569 - homoserine/homoserine lactone efflux protein 570 56.44 0 647835..648734 - 299 152981665 penP mma_0570 - Beta-lactamase class A 571 58.66 0 648758..649144 - 128 152982605 - mma_0571 - hypothetical protein 572 52.65 0 649298..650410 + 370 152982895 - mma_0572 - IS30 family transposase 573 61.72 +1 650476..651687 - 403 152982482 - mma_0573 - major facilitator transporter 574 57.56 0 651783..652748 + 321 152981643 - mma_0574 - LysR family transcriptional regulator 575 54.13 0 652745..653119 - 124 152982276 - mma_0575 - hypothetical protein 576 50.21 -1 653133..653612 - 159 152981776 - mma_0576 - hypothetical protein 577 41.25 -2 653609..655870 - 753 152983148 - mma_0577 - hypothetical protein 578 40.07 -2 655883..656713 - 276 152983022 dam mma_0578 - DNA adenine methylase 579 56.95 0 656710..658458 - 582 152980200 glnS mma_0579 - glutaminyl-tRNA synthetase 580 58.92 +1 658665..659426 - 253 152981919 - mma_0580 - hypothetical protein 581 59.66 +1 659601..661199 - 532 152979978 ggt1 mma_0581 - gamma-glutamyltranspeptidase 582 59.51 +1 661414..662196 + 260 152980071 glpQ mma_0582 - glycerophosphoryl diester phosphodiesterase 583 56.86 0 662300..664909 + 869 152979781 alaS mma_0583 - alanyl-tRNA synthetase 584 50.44 -1 665161..665388 + 75 152983203 - mma_0584 - hypothetical protein 585 54.93 0 665616..666365 + 249 152979969 etfB mma_0585 - electron transfer flavoprotein beta subunit 586 57.85 0 666428..667357 + 309 152980063 etfA mma_0586 - electron transfer flavoprotein alpha subunit 587 57.90 0 667498..669288 + 596 152981179 - mma_0587 - acyl-CoA dehydrogenase 588 58.07 0 669295..669678 - 127 152982846 - mma_0588 - hypothetical protein 589 60.74 +1 669675..671126 - 483 152980667 amtB2 mma_0589 - ammonium transporter 590 56.98 0 671338..671688 - 116 152982371 - mma_0590 - hypothetical protein 591 49.69 -1 671763..672245 + 160 152983023 rpsP mma_0591 - small subunit ribosomal protein S16 592 52.22 0 672273..672812 + 179 152980656 rimM mma_0592 - 16S rRNA processing protein RimM 593 54.80 0 672839..673588 + 249 152980226 trmD mma_0593 - tRNA (guanine-N(1)-)-methyltransferase 594 51.16 0 673701..674087 + 128 152980189 rplS mma_0594 - large subunit ribosomal protein L19 595 59.19 +1 674354..675022 + 222 152982360 - mma_0595 - hypothetical protein 596 57.89 0 675143..676099 + 318 152980221 cobD1 mma_0596 - adenosylcobinamide-phosphate synthase 597 55.07 0 676227..679097 + 956 152982119 - mma_0597 - hypothetical protein 598 55.87 0 679104..680465 - 453 152982453 - mma_0598 - hypothetical protein 599 59.52 +1 680462..681259 - 265 152982266 - mma_0599 - hypothetical protein 600 57.63 0 681866..683293 + 475 152981237 dacB mma_0600 - D-alanyl-D-alanine carboxypeptidase 601 56.22 0 683569..685320 + 583 152981219 ggt2 mma_0601 - gamma-glutamyltranspeptidase 602 55.09 0 685388..685888 - 166 152981857 - mma_0602 - hypothetical protein 603 62.30 +1 685888..686712 - 274 152982154 - mma_0603 - hypothetical protein 604 54.44 0 686726..687322 - 198 152981304 lemA2 mma_0604 - LemA family protein 605 55.89 0 687387..688277 - 296 152982701 - mma_0605 - transporter of the DMT superfamily 606 56.62 0 688337..689152 + 271 152979998 pyrF mma_0606 - orotidine 5'-phosphate decarboxylase 607 59.52 +1 689149..689652 - 167 152981356 cinA1 mma_0607 - competence/damage inducible protein CinA 608 55.56 0 689663..690184 - 173 152980547 pgpA mma_0608 - phosphatidylglycerophosphatase A 609 60.58 +1 690181..691149 - 322 152980240 thiL mma_0609 - thiamine-monophosphate kinase 610 56.47 0 691293..692498 - 401 152982729 rubB mma_0610 - rubredoxin reductase 611 55.34 0 692836..695148 + 770 152981049 maeB mma_0611 - malic enzyme 54.72 MEAN 4.12 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0