version 1.0
Janthinobacterium sp. Marseille, complete genome - 1..4110251 3697 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 485 57.30 0 536511..539330 + 939 152982608 nasA mma_0485 - nitrate reductase catalytic subunit 486 58.21 0 539393..540409 + 338 152981385 trpD2 mma_0486 - hypothetical protein 487 57.44 0 540387..541199 + 270 152980308 cobA mma_0487 - uroporphyrin-III C-methyltransferase 488 56.98 0 541271..542467 + 398 152980938 - mma_0488 - hypothetical protein 489 59.10 +1 542560..542982 + 140 152982649 gloA2 mma_0489 - lactoylglutathione lyase 490 51.17 0 543131..543343 + 70 152983162 rpsU mma_0490 - small subunit ribosomal protein S21 491 56.67 0 543472..543921 + 149 152981641 - mma_0491 - hypothetical protein 492 59.00 +1 543947..545746 + 599 152979908 dnaG mma_0492 - DNA primase 493 53.04 0 545965..548445 + 826 152980761 rpoD mma_0493 - RNA polymerase primary sigma factor 494 48.53 -1 548709..549695 + 328 152983145 - mma_0494 - phage integrase family site specific recombinase 495 43.03 -2 549692..550588 - 298 152983146 - mma_0495 - hypothetical protein 496 45.01 -2 550702..551403 + 233 152983201 - mma_0496 - hypothetical protein 497 44.44 -2 551563..553110 - 515 152983147 - mma_0497 - hypothetical protein 498 45.39 -2 553720..554457 + 245 152983349 - mma_0498 - hypothetical protein 499 55.23 0 554698..556122 + 474 152981505 - mma_0499 - hypothetical protein 500 53.42 0 556301..557395 + 364 152981718 - mma_0500 - porin 501 58.64 0 557446..559002 - 518 152982562 - mma_0501 - major facilitator superfamily drug efflux transporter 502 55.05 0 558995..559588 - 197 152982366 - mma_0502 - acetyltransferase 503 56.95 0 559636..560520 + 294 152982810 - mma_0503 - LysR family transcriptional regulator 504 56.60 0 560564..561874 - 436 152980309 guaD mma_0504 - guanine deaminase 505 58.76 0 561928..562977 - 349 152979887 xdhC1 mma_0505 - xanthine and CO dehydrogenases maturation factor 506 58.10 0 562987..565344 - 785 152980612 xdhB mma_0506 - xanthine dehydrogenase, subunit B 507 57.08 0 565363..566853 - 496 152980541 xdhA mma_0507 - xanthine dehydrogenase, subunit A 508 56.94 0 566971..568266 - 431 152981023 - mma_0508 - uracil/xanthine permease 509 58.22 0 568466..569827 - 453 152981228 - mma_0509 - hydroxydechloroatrazine ethylaminohydrolase 510 57.52 0 570121..571749 - 542 152981467 tar7 mma_0510 - methyl-accepting chemotaxis protein 511 58.91 +1 571764..573530 - 588 152981424 - mma_0511 - unknown domain/N-carbamoyl-L-amino acid hydrolase fusion protein 512 57.20 0 573632..575026 - 464 152980454 pbuX2 mma_0512 - xanthine permease 513 54.91 0 575271..576206 - 311 152982787 - mma_0513 - LysR family transcriptional regulator 514 54.69 0 576579..577814 + 411 152981072 - mma_0514 - hypothetical protein 515 56.77 0 577863..579488 + 541 152979924 hutH mma_0515 - histidine ammonia-lyase 516 52.88 0 579597..580691 - 364 152981709 - mma_0516 - porin 517 56.99 0 580817..581767 - 316 152981727 - mma_0517 - polysaccharide deacetylase family protein 518 54.06 0 581955..582311 + 118 152981524 - mma_0518 - transthyretin-like protein 519 56.31 0 582357..584288 - 643 152982241 - mma_0519 - two component sensor histidine kinase 520 54.13 0 584576..588412 + 1278 152981624 - mma_0520 - autotransporter 521 55.01 0 588438..591209 + 923 152981607 - mma_0521 - outer membrane autotransporter 522 57.19 0 591219..593318 + 699 152982107 - mma_0522 - hypothetical protein 523 55.56 0 593327..593938 + 203 152980747 cysC mma_0523 - adenylylsulfate kinase 524 48.40 -1 594033..594251 - 72 152982460 - mma_0524 - hypothetical protein 525 58.59 0 594410..595573 - 387 152980092 cfa1 mma_0525 - cyclopropane fatty acyl phospholipid synthase 526 59.14 +1 595760..596623 + 287 152982688 - mma_0526 - LysR family transcriptional regulator 527 57.25 0 596787..598454 + 555 152981373 aer mma_0527 - aerotaxis sensor receptor (chemotaxis transducer) transmembrane protein 528 57.26 0 598777..600318 + 513 152981130 - mma_0528 - ATP-dependent RNA helicase 529 56.24 0 600385..601266 - 293 152980417 - mma_0529 - glutamyl-tRNA synthetase related protein 530 59.37 +1 601270..602187 - 305 152982198 - mma_0530 - LysR family transcriptional regulator 531 54.08 0 602311..603009 + 232 152981404 - mma_0531 - pirin-related protein 532 54.26 0 603076..603921 - 281 152980539 kdsA mma_0532 - 2-dehydro-3-deoxyphosphooctonate aldolase 533 55.83 0 603997..604836 - 279 152981253 - mma_0533 - hypothetical protein 534 55.25 0 605048..608506 + 1152 152980633 dnaE1 mma_0534 - DNA polymerase III alpha subunit 535 53.94 0 608549..610285 + 578 152982174 msbA mma_0535 - ABC-type multidrug transport system, ATPase and permease components 536 53.86 0 610326..611090 + 254 152982713 - mma_0536 - hypothetical protein 537 55.05 0 611167..612630 - 487 152980616 cafA mma_0537 - ribonuclease G (RNAse G) (cytoplasmic axial filament protein) 538 56.36 0 612627..613247 - 206 152981387 maf1 mma_0538 - nucleotide-binding protein implicated in inhibition of septum formation 539 56.69 0 613255..613725 - 156 152981375 - mma_0539 - SPOUT methyltransferase superfamily protein 540 56.41 0 613738..614400 - 220 152982104 - mma_0540 - hypothetical protein 541 54.61 0 614400..615071 - 223 152980100 nadD mma_0541 - nicotinate-nucleotide adenylyltransferase 542 56.96 0 615073..616071 - 332 152979898 hemF mma_0542 - coproporphyrinogen III oxidase 543 57.63 0 616114..617385 - 423 152979938 purD mma_0543 - phosphoribosylamine--glycine ligase 544 56.47 0 617509..618234 - 241 152981153 - mma_0544 - hypothetical protein 545 55.64 0 618325..619830 + 501 152981573 - mma_0545 - hypothetical protein 546 58.42 0 619889..620797 - 302 152982816 - mma_0546 - LysR family transcriptional regulator 547 53.01 0 620972..621586 + 204 152980412 acpD1 mma_0547 - acyl carrier protein phosphodiesterase 548 57.43 0 621672..622310 + 212 152980494 ribA mma_0548 - GTP cyclohydrolase II 549 53.31 0 622385..623290 + 301 152982668 - mma_0549 - transporter of the DMT superfamily 550 59.87 +1 623300..624079 + 259 152982386 - mma_0550 - short chain dehydrogenase/reductase family oxidoreductase 551 57.95 0 624114..625088 + 324 152980998 qor2 mma_0551 - NADPH2:quinone reductase 552 52.43 0 625323..625940 - 205 152982450 - mma_0552 - hypothetical protein 553 57.14 0 626182..628836 + 884 152980567 pepN mma_0553 - aminopeptidase N 554 55.62 0 628927..629931 + 334 152979833 fbp mma_0554 - fructose-1,6-bisphosphatase I 555 53.66 0 636336..637511 + 391 152980194 atoB mma_0555 - acetyl-CoA C-acetyltransferase 556 53.98 0 637556..638296 + 246 152981402 phbB mma_0556 - acetoacetyl-CoA reductase 557 53.68 0 638354..638992 - 212 152981446 - mma_0557 - hypothetical protein 558 55.95 0 639049..639636 - 195 152979979 - mma_0558 - hypothetical protein 559 56.31 0 639689..639910 - 73 152983202 - mma_0559 - hypothetical protein 560 57.88 0 639940..640212 - 90 152982712 - mma_0560 - hypothetical protein 561 54.26 0 640244..640630 - 128 152981837 - mma_0561 - hypothetical protein 562 57.79 0 640729..642159 - 476 152980617 sbcB mma_0562 - exonuclease I 563 57.76 0 642196..643161 - 321 152982877 - mma_0563 - hypothetical protein 564 54.34 0 643171..644046 - 291 152981680 - mma_0564 - signal transduction protein 565 56.07 0 644043..644363 - 106 152982592 - mma_0565 - hypothetical protein 566 54.03 0 644545..645810 - 421 152982756 - mma_0566 - hypothetical protein 567 53.44 0 645888..646280 - 130 152981506 - mma_0567 - hypothetical protein 568 52.84 0 646352..646756 - 134 152982746 - mma_0568 - hypothetical protein 569 55.50 0 646943..647587 - 214 152981789 rhtB mma_0569 - homoserine/homoserine lactone efflux protein 570 56.44 0 647835..648734 - 299 152981665 penP mma_0570 - Beta-lactamase class A 571 58.66 0 648758..649144 - 128 152982605 - mma_0571 - hypothetical protein 572 52.65 0 649298..650410 + 370 152982895 - mma_0572 - IS30 family transposase 573 61.72 +1 650476..651687 - 403 152982482 - mma_0573 - major facilitator transporter 574 57.56 0 651783..652748 + 321 152981643 - mma_0574 - LysR family transcriptional regulator 575 54.13 0 652745..653119 - 124 152982276 - mma_0575 - hypothetical protein 576 50.21 -1 653133..653612 - 159 152981776 - mma_0576 - hypothetical protein 577 41.25 -2 653609..655870 - 753 152983148 - mma_0577 - hypothetical protein 578 40.07 -2 655883..656713 - 276 152983022 dam mma_0578 - DNA adenine methylase 579 56.95 0 656710..658458 - 582 152980200 glnS mma_0579 - glutaminyl-tRNA synthetase 580 58.92 +1 658665..659426 - 253 152981919 - mma_0580 - hypothetical protein 581 59.66 +1 659601..661199 - 532 152979978 ggt1 mma_0581 - gamma-glutamyltranspeptidase 582 59.51 +1 661414..662196 + 260 152980071 glpQ mma_0582 - glycerophosphoryl diester phosphodiesterase 583 56.86 0 662300..664909 + 869 152979781 alaS mma_0583 - alanyl-tRNA synthetase 584 50.44 -1 665161..665388 + 75 152983203 - mma_0584 - hypothetical protein 54.72 MEAN 4.12 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0