version 1.0
Janthinobacterium sp. Marseille, complete genome - 1..4110251 3697 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 448 48.74 -1 500360..500794 + 144 152981959 azu1 mma_0448 - pseudoazurin (blue copper protein) 449 57.00 0 500935..501327 + 130 152981841 - mma_0449 - sulfur oxidation protein 450 53.85 0 501370..501681 + 103 152982504 soxZ mma_0450 - sulfur oxidation protein soxZ 451 56.34 0 501800..502603 + 267 152982716 soxA mma_0451 - sulfur oxidation protein soxA 452 54.44 0 502631..503227 + 198 152982468 - mma_0452 - hypothetical protein 453 54.97 0 503344..505062 + 572 152981324 soxB mma_0453 - sulfur oxidation protein SoxB 454 53.85 0 505074..505658 + 194 152982263 - mma_0454 - hypothetical protein 455 51.16 0 505715..506230 + 171 152982477 - mma_0455 - hypothetical protein 456 54.49 0 506230..506763 + 177 152982228 - mma_0456 - hypothetical protein 457 51.24 0 506861..507223 + 120 152982537 - mma_0457 - ArsR family transcriptional regulator 458 59.95 +1 507223..507654 + 143 152982099 - mma_0458 - hypothetical protein 459 57.45 0 507665..508087 + 140 152982116 - mma_0459 - hypothetical protein 460 57.56 0 508346..509278 + 310 152982436 - mma_0460 - hypothetical protein 461 60.11 +1 509593..510537 - 314 152979929 miaA mma_0461 - tRNA delta(2)-isopentenylpyrophosphate transferase 462 57.17 0 510539..512380 - 613 152980279 mutL mma_0462 - DNA mismatch repair protein 463 51.78 0 512503..513147 + 214 152980755 dedA1 mma_0463 - membrane-associated protein dedA 464 56.32 0 513208..514512 - 434 152980575 amiA mma_0464 - N-acetylmuramoyl-L-alanine amidase 465 52.47 0 514476..514961 - 161 152981588 - mma_0465 - hypothetical protein 466 56.57 0 515139..516029 - 296 152981813 - mma_0466 - auxin efflux carrier 467 58.08 0 516136..516729 - 197 152981441 dctR mma_0467 - two-components system response regulator 468 57.63 0 516823..518859 - 678 152982047 - mma_0468 - signal transduction histidine kinase 469 52.09 0 518994..520091 + 365 152981151 dctP mma_0469 - C4-dicarboxylate-binding periplasmic protein 470 53.37 0 520518..521495 + 325 152981135 tctC4 mma_0470 - tricarboxylate binding receptor 471 54.98 0 521674..522135 + 153 152982613 tctB4 mma_0471 - small permease component of tripartite tricarboxylate transporter 472 55.16 0 522148..523650 + 500 152981260 tctA4 mma_0472 - tripartite tricarboxylate transporter TctB 473 58.48 0 524196..524696 + 166 152981780 ogt2 mma_0473 - methylated-DNA-[protein]-cysteine methyltransferase 474 59.05 +1 524693..525598 + 301 152981084 xerD mma_0474 - integrase/recombinase 475 56.03 0 526050..527036 - 328 152982053 - mma_0475 - hypothetical protein 476 56.61 0 527058..527564 + 168 152981610 - mma_0476 - hypothetical protein 477 56.60 0 527877..528482 + 201 152980933 - mma_0477 - putative glycerol-3-phosphate acyltransferase PlsY 478 56.56 0 528523..529581 - 352 152981246 gcp mma_0478 - O-sialoglycoprotein endopeptidase 479 56.59 0 529655..530299 + 214 152981555 nasT mma_0479 - response regulator NasT 480 54.90 0 530632..531855 + 407 152979787 nasF mma_0480 - nitrate transport system substrate-binding protein 481 54.19 0 531865..532794 + 309 152981495 nasE mma_0481 - ABC-type nitrate transport system, permease component 482 57.37 0 532841..533647 + 268 152980278 nasD mma_0482 - nitrate transport system ATP-binding protein 483 55.88 0 533690..536128 + 812 152979799 nirB mma_0483 - nitrite reductase (NAD(P)H) large subunit 484 56.58 0 536158..536514 + 118 152980169 nirD mma_0484 - nitrite reductase (NAD(P)H) small subunit 485 57.30 0 536511..539330 + 939 152982608 nasA mma_0485 - nitrate reductase catalytic subunit 486 58.21 0 539393..540409 + 338 152981385 trpD2 mma_0486 - hypothetical protein 487 57.44 0 540387..541199 + 270 152980308 cobA mma_0487 - uroporphyrin-III C-methyltransferase 488 56.98 0 541271..542467 + 398 152980938 - mma_0488 - hypothetical protein 489 59.10 +1 542560..542982 + 140 152982649 gloA2 mma_0489 - lactoylglutathione lyase 490 51.17 0 543131..543343 + 70 152983162 rpsU mma_0490 - small subunit ribosomal protein S21 491 56.67 0 543472..543921 + 149 152981641 - mma_0491 - hypothetical protein 492 59.00 +1 543947..545746 + 599 152979908 dnaG mma_0492 - DNA primase 493 53.04 0 545965..548445 + 826 152980761 rpoD mma_0493 - RNA polymerase primary sigma factor 494 48.53 -1 548709..549695 + 328 152983145 - mma_0494 - phage integrase family site specific recombinase 495 43.03 -2 549692..550588 - 298 152983146 - mma_0495 - hypothetical protein 496 45.01 -2 550702..551403 + 233 152983201 - mma_0496 - hypothetical protein 497 44.44 -2 551563..553110 - 515 152983147 - mma_0497 - hypothetical protein 498 45.39 -2 553720..554457 + 245 152983349 - mma_0498 - hypothetical protein 499 55.23 0 554698..556122 + 474 152981505 - mma_0499 - hypothetical protein 500 53.42 0 556301..557395 + 364 152981718 - mma_0500 - porin 501 58.64 0 557446..559002 - 518 152982562 - mma_0501 - major facilitator superfamily drug efflux transporter 502 55.05 0 558995..559588 - 197 152982366 - mma_0502 - acetyltransferase 503 56.95 0 559636..560520 + 294 152982810 - mma_0503 - LysR family transcriptional regulator 504 56.60 0 560564..561874 - 436 152980309 guaD mma_0504 - guanine deaminase 505 58.76 0 561928..562977 - 349 152979887 xdhC1 mma_0505 - xanthine and CO dehydrogenases maturation factor 506 58.10 0 562987..565344 - 785 152980612 xdhB mma_0506 - xanthine dehydrogenase, subunit B 507 57.08 0 565363..566853 - 496 152980541 xdhA mma_0507 - xanthine dehydrogenase, subunit A 508 56.94 0 566971..568266 - 431 152981023 - mma_0508 - uracil/xanthine permease 509 58.22 0 568466..569827 - 453 152981228 - mma_0509 - hydroxydechloroatrazine ethylaminohydrolase 510 57.52 0 570121..571749 - 542 152981467 tar7 mma_0510 - methyl-accepting chemotaxis protein 511 58.91 +1 571764..573530 - 588 152981424 - mma_0511 - unknown domain/N-carbamoyl-L-amino acid hydrolase fusion protein 512 57.20 0 573632..575026 - 464 152980454 pbuX2 mma_0512 - xanthine permease 513 54.91 0 575271..576206 - 311 152982787 - mma_0513 - LysR family transcriptional regulator 514 54.69 0 576579..577814 + 411 152981072 - mma_0514 - hypothetical protein 515 56.77 0 577863..579488 + 541 152979924 hutH mma_0515 - histidine ammonia-lyase 516 52.88 0 579597..580691 - 364 152981709 - mma_0516 - porin 517 56.99 0 580817..581767 - 316 152981727 - mma_0517 - polysaccharide deacetylase family protein 518 54.06 0 581955..582311 + 118 152981524 - mma_0518 - transthyretin-like protein 519 56.31 0 582357..584288 - 643 152982241 - mma_0519 - two component sensor histidine kinase 520 54.13 0 584576..588412 + 1278 152981624 - mma_0520 - autotransporter 521 55.01 0 588438..591209 + 923 152981607 - mma_0521 - outer membrane autotransporter 522 57.19 0 591219..593318 + 699 152982107 - mma_0522 - hypothetical protein 523 55.56 0 593327..593938 + 203 152980747 cysC mma_0523 - adenylylsulfate kinase 524 48.40 -1 594033..594251 - 72 152982460 - mma_0524 - hypothetical protein 525 58.59 0 594410..595573 - 387 152980092 cfa1 mma_0525 - cyclopropane fatty acyl phospholipid synthase 526 59.14 +1 595760..596623 + 287 152982688 - mma_0526 - LysR family transcriptional regulator 527 57.25 0 596787..598454 + 555 152981373 aer mma_0527 - aerotaxis sensor receptor (chemotaxis transducer) transmembrane protein 528 57.26 0 598777..600318 + 513 152981130 - mma_0528 - ATP-dependent RNA helicase 529 56.24 0 600385..601266 - 293 152980417 - mma_0529 - glutamyl-tRNA synthetase related protein 530 59.37 +1 601270..602187 - 305 152982198 - mma_0530 - LysR family transcriptional regulator 531 54.08 0 602311..603009 + 232 152981404 - mma_0531 - pirin-related protein 532 54.26 0 603076..603921 - 281 152980539 kdsA mma_0532 - 2-dehydro-3-deoxyphosphooctonate aldolase 533 55.83 0 603997..604836 - 279 152981253 - mma_0533 - hypothetical protein 534 55.25 0 605048..608506 + 1152 152980633 dnaE1 mma_0534 - DNA polymerase III alpha subunit 535 53.94 0 608549..610285 + 578 152982174 msbA mma_0535 - ABC-type multidrug transport system, ATPase and permease components 536 53.86 0 610326..611090 + 254 152982713 - mma_0536 - hypothetical protein 537 55.05 0 611167..612630 - 487 152980616 cafA mma_0537 - ribonuclease G (RNAse G) (cytoplasmic axial filament protein) 538 56.36 0 612627..613247 - 206 152981387 maf1 mma_0538 - nucleotide-binding protein implicated in inhibition of septum formation 539 56.69 0 613255..613725 - 156 152981375 - mma_0539 - SPOUT methyltransferase superfamily protein 540 56.41 0 613738..614400 - 220 152982104 - mma_0540 - hypothetical protein 541 54.61 0 614400..615071 - 223 152980100 nadD mma_0541 - nicotinate-nucleotide adenylyltransferase 542 56.96 0 615073..616071 - 332 152979898 hemF mma_0542 - coproporphyrinogen III oxidase 543 57.63 0 616114..617385 - 423 152979938 purD mma_0543 - phosphoribosylamine--glycine ligase 544 56.47 0 617509..618234 - 241 152981153 - mma_0544 - hypothetical protein 545 55.64 0 618325..619830 + 501 152981573 - mma_0545 - hypothetical protein 546 58.42 0 619889..620797 - 302 152982816 - mma_0546 - LysR family transcriptional regulator 547 53.01 0 620972..621586 + 204 152980412 acpD1 mma_0547 - acyl carrier protein phosphodiesterase 54.72 MEAN 4.12 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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