version 1.0
Janthinobacterium sp. Marseille, complete genome - 1..4110251 3697 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 359 54.90 0 399865..401232 - 455 152979778 purB mma_0359 - adenylosuccinate lyase 360 52.78 0 401432..402043 + 203 152980248 gst1 mma_0360 - glutathione S-transferase 361 49.48 -1 402111..402587 - 158 152980645 bfr1 mma_0361 - bacterioferritin (cytochrome b1) 362 47.89 -1 402799..403272 - 157 152980661 bfr2 mma_0362 - bacterioferritin (cytochrome b1) 363 50.85 0 403585..403995 - 136 152980542 exbD3 mma_0363 - biopolymer transport protein ExbD 364 56.79 0 403995..404723 - 242 152981614 exbB2 mma_0364 - biopolymer transport protein ExbB 365 55.90 0 404736..405422 - 228 152982893 tonB mma_0365 - TonB-like protein 366 49.07 -1 405434..405649 - 71 152983198 bfd mma_0366 - bacterioferritin-associated ferredoxin protein 367 53.58 0 405746..406066 - 106 152983348 - mma_0367 - hypothetical protein 368 56.75 0 406580..408202 - 540 152980948 - mma_0368 - glutamate synthase large subunit 369 50.94 0 408569..409528 + 319 152981902 - mma_0369 - hypothetical protein 370 52.56 0 409534..409845 + 103 152982413 - mma_0370 - hypothetical protein 371 48.24 -1 409845..410213 + 122 152981962 - mma_0371 - hypothetical protein 372 51.65 0 410220..410885 + 221 152981644 - mma_0372 - hypothetical protein 373 57.46 0 410932..412050 - 372 152981022 trmU mma_0373 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 374 56.03 0 412043..412531 - 162 152982175 - mma_0374 - MutT/NUDIX family hydrolase 375 48.89 -1 412898..413257 + 119 152980191 panD mma_0375 - aspartate alpha-decarboxylase 376 57.35 0 413382..414980 + 532 152979857 pntA mma_0376 - NAD(P) transhydrogenase subunit alpha 377 53.59 0 414991..416397 + 468 152979867 pntB mma_0377 - NAD(P) transhydrogenase subunit beta 378 56.95 0 416495..417400 - 301 152981563 - mma_0378 - LysR family transcriptional regulator 379 51.69 0 417508..419256 + 582 152981070 gcl mma_0379 - glyoxylate carboligase 380 49.10 -1 419258..420037 + 259 152979885 gip mma_0380 - hydroxypyruvate isomerase 381 51.58 0 420135..421022 + 295 152980168 garR2 mma_0381 - 2-hydroxy-3-oxopropionate reductase 382 56.95 0 421111..422376 + 421 152980672 ttuD mma_0382 - hydroxypyruvate reductase 383 53.56 0 422453..423871 + 472 152980607 pyk mma_0383 - pyruvate kinase 384 53.50 0 424278..426191 + 637 152980075 thiC mma_0384 - thiamine biosynthesis protein 385 59.31 +1 426191..426394 + 67 152982020 thiS2 mma_0385 - thiamine biosynthesis protein ThiS 386 57.02 0 426469..427266 + 265 152980962 thiG2 mma_0386 - thiamine biosynthesis protein 387 55.01 0 427380..428357 + 325 152981242 qor1 mma_0387 - NADPH2:quinone reductase 388 54.94 0 428430..429410 - 326 152981488 - mma_0388 - LysR family transcriptional regulator 389 51.49 0 429555..429890 + 111 152983199 - mma_0389 - hypothetical protein 390 51.93 0 430301..431467 + 388 152980238 sucC mma_0390 - succinyl-CoA synthetase beta chain 391 52.40 0 431470..432345 + 291 152980019 sucD mma_0391 - succinyl-CoA synthetase subunit alpha 392 49.74 -1 432563..433330 + 255 152981382 - mma_0392 - FAA-hydrolase family protein 393 52.72 0 433350..434360 + 336 152980035 apbA mma_0393 - 2-dehydropantoate 2-reductase 394 49.08 -1 435026..436054 + 342 152981073 tctC2 mma_0394 - tricarboxylate binding receptor 395 48.66 -1 436170..436691 + 173 152982783 tctB2 mma_0395 - small permease component of tripartite tricarboxylate transporter 396 52.22 0 436764..438293 + 509 152981013 tctA2 mma_0396 - tricarboxylate transport protein TctA 397 54.44 0 438531..439364 + 277 152982485 - mma_0397 - hypothetical protein 398 49.26 -1 439418..440026 - 202 152982277 - mma_0398 - hypothetical protein 399 51.72 0 440313..442025 + 570 152980239 oxc mma_0399 - putative oxalyl-CoA decarboxylase 400 49.29 -1 442277..443536 + 419 152979919 - mma_0400 - formyl-coenzyme A transferase 401 54.44 0 444623..445873 + 416 152981165 caiB1 mma_0401 - formyl-coenzyme A transferase 402 54.81 0 446618..448321 + 567 152980298 fdhB1 mma_0402 - formate dehydrogenase beta subunit 403 53.19 0 448353..451193 + 946 152981034 fdhA1 mma_0403 - formate dehydrogenase alpha subunit 404 58.64 0 451277..452173 - 298 152982128 - mma_0404 - transporter of the DMT superfamily 405 52.55 0 452263..453126 + 287 152981362 fdhD1 mma_0405 - formate dehydrogenase accessory protein fdhD 406 54.72 0 453149..454663 - 504 152982689 dadA1 mma_0406 - D-amino-acid dehydrogenase 407 50.00 -1 454806..455141 + 111 152982894 - mma_0407 - hypothetical protein 408 52.16 0 455237..455560 - 107 152981896 glnB1 mma_0408 - nitrogen regulatory protein PII 409 56.19 0 455632..458733 - 1033 152980988 czcA2 mma_0409 - acriflavin resistance protein:heavy metal efflux pump 410 58.59 0 458738..459889 - 383 152981912 czcB2 mma_0410 - cation efflux protein 411 58.15 0 459886..461130 - 414 152981764 - mma_0411 - outer membrane cation efflux system protein 412 56.19 0 461219..461743 - 174 152982428 - mma_0412 - hypothetical protein 413 57.72 0 461939..463078 - 379 152980276 ubiH mma_0413 - 2-octaprenyl-6-methoxyphenol hydroxylase 414 56.76 0 463089..464420 - 443 152980549 pepP mma_0414 - X-Pro aminopeptidase 415 56.07 0 464417..465133 - 238 152982188 - mma_0415 - nucleotidyl transferase 416 55.11 0 465233..466270 - 345 152981139 - mma_0416 - hypothetical protein 417 52.26 0 466372..468627 + 751 152979883 ostA mma_0417 - OstA organic solvent tolerance protein 418 54.26 0 468650..470059 + 469 152982039 surA mma_0418 - peptidyl-prolyl cis-trans isomerase SurA 419 56.69 0 470087..471118 + 343 152980362 pdxA mma_0419 - 4-hydroxythreonine-4-phosphate dehydrogenase 420 56.51 0 471163..471930 + 255 152979807 ksgA mma_0420 - dimethyladenosine transferase 421 53.19 0 472018..472425 + 135 152982021 gloA1 mma_0421 - lactoylglutathione lyase 422 56.26 0 472473..473375 - 300 152981584 - mma_0422 - hypothetical protein 423 53.78 0 473389..474156 - 255 152979900 plsC1 mma_0423 - 1-acyl-sn-glycerol-3-phosphate acyltransferase 424 55.04 0 474188..474772 - 194 152980184 - mma_0424 - phosphatase 425 57.06 0 474826..476928 - 700 152980513 glyS mma_0425 - glycyl-tRNA synthetase, beta chain 426 57.63 0 476931..477848 - 305 152983462 glyQ mma_0426 - glycyl-tRNA synthetase subunit alpha 427 61.06 +1 477920..479470 - 516 152980227 lnt mma_0427 - apolipoprotein N-acyltransferase 428 54.43 0 479516..480406 - 296 152980041 corC mma_0428 - Mg2+ and Co2+ transporter 429 55.34 0 480533..480991 - 152 152981675 - mma_0429 - hypothetical protein 430 55.93 0 480975..482045 - 356 152980436 phoH mma_0430 - phosphate starvation inducible protein phoH 431 54.44 0 482107..483447 - 446 152979971 miaB mma_0431 - tRNA modifying enzyme 432 56.69 0 483472..483852 - 126 152982617 - mma_0432 - hypothetical protein 433 55.41 0 484095..484538 - 147 152981901 usp3 mma_0433 - universal stress protein (Usp) 434 51.15 0 484550..484723 + 57 152983200 - mma_0434 - hypothetical protein 435 56.84 0 484776..487778 - 1000 152981534 glcD2 mma_0435 - glycolate oxidase subunit 436 57.39 0 487998..489215 - 405 152980032 - mma_0436 - serine--glyoxylate aminotransferase 437 52.78 0 489512..490267 + 251 152981662 - mma_0437 - GntR family transcriptional regulator 438 56.66 0 490380..491888 - 502 152981234 tctA3 mma_0438 - tricarboxylate transport protein TctA 439 53.45 0 491898..492419 - 173 152982781 tctB3 mma_0439 - small permease component of tripartite tricarboxylate transporter 440 53.73 0 492495..493499 - 334 152980012 tctC3 mma_0440 - tricarboxylate binding receptor 441 58.71 0 493881..495023 + 380 152981391 - mma_0441 - low-specificity D-threonine aldolase 442 55.15 0 495169..495741 + 190 152982145 - mma_0442 - hypothetical protein 443 55.17 0 495803..496828 + 341 152982004 - mma_0443 - beta lactamase precursor 444 51.64 0 496869..497294 + 141 152981832 - mma_0444 - hypothetical protein 445 53.16 0 497406..497753 + 115 152982274 - mma_0445 - ArsR family transcriptional regulator 446 56.56 0 497847..499211 + 454 152981778 soxC mma_0446 - sulfite oxidase molybdopterin subunit 447 55.90 0 499195..500271 + 358 152981927 - mma_0447 - cytochrome c, class I 448 48.74 -1 500360..500794 + 144 152981959 azu1 mma_0448 - pseudoazurin (blue copper protein) 449 57.00 0 500935..501327 + 130 152981841 - mma_0449 - sulfur oxidation protein 450 53.85 0 501370..501681 + 103 152982504 soxZ mma_0450 - sulfur oxidation protein soxZ 451 56.34 0 501800..502603 + 267 152982716 soxA mma_0451 - sulfur oxidation protein soxA 452 54.44 0 502631..503227 + 198 152982468 - mma_0452 - hypothetical protein 453 54.97 0 503344..505062 + 572 152981324 soxB mma_0453 - sulfur oxidation protein SoxB 454 53.85 0 505074..505658 + 194 152982263 - mma_0454 - hypothetical protein 455 51.16 0 505715..506230 + 171 152982477 - mma_0455 - hypothetical protein 456 54.49 0 506230..506763 + 177 152982228 - mma_0456 - hypothetical protein 457 51.24 0 506861..507223 + 120 152982537 - mma_0457 - ArsR family transcriptional regulator 458 59.95 +1 507223..507654 + 143 152982099 - mma_0458 - hypothetical protein 54.72 MEAN 4.12 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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