version 1.0
Janthinobacterium sp. Marseille, complete genome - 1..4110251 3697 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 323 53.89 0 362071..364809 + 912 152980489 polA mma_0323 - DNA polymerase I 324 56.38 0 364914..365798 + 294 152980342 - mma_0324 - carboxymethylenebutenolidase 325 55.51 0 366034..366705 + 223 152980477 - mma_0325 - ZIP zinc transporter 326 58.27 0 366726..367571 - 281 152980059 sseA2 mma_0326 - thiosulfate sulfurtransferase 327 57.38 0 367595..368509 - 304 152980592 - mma_0327 - transporter of the DMT superfamily 328 53.51 0 368648..369901 - 417 152980174 - mma_0328 - dioxygenase (alpha subunit) oxidoreductase protein 329 55.69 0 370104..370358 + 84 152983197 xseB mma_0329 - exodeoxyribonuclease VII small subunit 330 59.07 +1 370406..371248 + 280 152979918 ispA mma_0330 - geranyltranstransferase 331 55.73 0 371250..373115 + 621 152979790 dxs mma_0331 - 1-deoxy-D-xylulose-5-phosphate synthase 332 53.16 0 373168..373974 + 268 152979889 - mma_0332 - putative GTP cyclohydrolase 333 56.38 0 374045..374608 - 187 152979973 - mma_0333 - hypothetical protein 334 57.64 0 374835..375731 + 298 152980163 - mma_0334 - transcriptional regulator 335 57.59 0 375899..377386 + 495 152979945 glcD1 mma_0335 - glycolate oxidase (fad-linked subunit) oxidoreductase protein 336 58.52 0 377415..378470 + 351 152980441 glcE mma_0336 - glycolate oxidase, subunit GlcE 337 54.50 0 378514..379746 + 410 152980162 glcF mma_0337 - glycolate oxidase iron-sulfur subunit 338 53.29 0 379819..380304 - 161 152980104 bsaA mma_0338 - glutathione peroxidase 339 53.39 0 380301..381437 - 378 152980677 pilU1 mma_0339 - PilU twitching motility protein 340 56.70 0 381539..382582 - 347 152980378 pilT mma_0340 - PilT twitching motility protein 341 55.74 0 382702..383406 + 234 152980093 - mma_0341 - hypothetical protein 342 57.45 0 383396..384220 + 274 152979991 proC mma_0342 - pyrroline-5-carboxylate reductase 343 54.36 0 384309..384755 - 148 152980465 - mma_0343 - hypothetical protein 344 55.89 0 384915..385415 - 166 152980066 - mma_0344 - acetyltransferase 345 56.49 0 385429..386067 - 212 152980668 - mma_0345 - ThiJ/PfpI family protein 346 57.69 0 386105..387541 - 478 152980367 - mma_0346 - major facilitator superfamily drug efflux transporter 347 56.84 0 387557..388411 - 284 152980249 ubiA mma_0347 - 4-hydroxybenzoate octaprenyltransferase 348 58.13 0 388462..389457 - 331 152980366 oxyR mma_0348 - OxyR hydrogen peroxide-inducible genes activator 349 57.75 0 389468..391699 - 743 152980116 recG mma_0349 - RecG-like helicase 350 55.56 0 391823..392848 + 341 152980695 queA mma_0350 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase 351 54.26 0 392842..393969 + 375 152980105 tgt mma_0351 - queuine/archaeosine tRNA-ribosyltransferase 352 49.07 -1 394073..394396 + 107 152980538 yajC mma_0352 - preprotein translocase subunit YajC 353 54.62 0 394476..396335 + 619 152980440 secD mma_0353 - preprotein translocase SecD subunit 354 51.64 0 396458..397402 + 314 152979888 secF mma_0354 - preprotein translocase subunit SecF 355 54.44 0 397467..397916 - 149 152981973 - mma_0355 - MarR family transcriptional regulator 356 50.88 0 398001..398570 - 189 152979972 - mma_0356 - hypothetical protein 357 51.56 0 398635..399210 - 191 152980568 - mma_0357 - hypothetical protein 358 59.81 +1 399237..399761 - 174 152980646 cybB1 mma_0358 - cytochrome B561 359 54.90 0 399865..401232 - 455 152979778 purB mma_0359 - adenylosuccinate lyase 360 52.78 0 401432..402043 + 203 152980248 gst1 mma_0360 - glutathione S-transferase 361 49.48 -1 402111..402587 - 158 152980645 bfr1 mma_0361 - bacterioferritin (cytochrome b1) 362 47.89 -1 402799..403272 - 157 152980661 bfr2 mma_0362 - bacterioferritin (cytochrome b1) 363 50.85 0 403585..403995 - 136 152980542 exbD3 mma_0363 - biopolymer transport protein ExbD 364 56.79 0 403995..404723 - 242 152981614 exbB2 mma_0364 - biopolymer transport protein ExbB 365 55.90 0 404736..405422 - 228 152982893 tonB mma_0365 - TonB-like protein 366 49.07 -1 405434..405649 - 71 152983198 bfd mma_0366 - bacterioferritin-associated ferredoxin protein 367 53.58 0 405746..406066 - 106 152983348 - mma_0367 - hypothetical protein 368 56.75 0 406580..408202 - 540 152980948 - mma_0368 - glutamate synthase large subunit 369 50.94 0 408569..409528 + 319 152981902 - mma_0369 - hypothetical protein 370 52.56 0 409534..409845 + 103 152982413 - mma_0370 - hypothetical protein 371 48.24 -1 409845..410213 + 122 152981962 - mma_0371 - hypothetical protein 372 51.65 0 410220..410885 + 221 152981644 - mma_0372 - hypothetical protein 373 57.46 0 410932..412050 - 372 152981022 trmU mma_0373 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 374 56.03 0 412043..412531 - 162 152982175 - mma_0374 - MutT/NUDIX family hydrolase 375 48.89 -1 412898..413257 + 119 152980191 panD mma_0375 - aspartate alpha-decarboxylase 376 57.35 0 413382..414980 + 532 152979857 pntA mma_0376 - NAD(P) transhydrogenase subunit alpha 377 53.59 0 414991..416397 + 468 152979867 pntB mma_0377 - NAD(P) transhydrogenase subunit beta 378 56.95 0 416495..417400 - 301 152981563 - mma_0378 - LysR family transcriptional regulator 379 51.69 0 417508..419256 + 582 152981070 gcl mma_0379 - glyoxylate carboligase 380 49.10 -1 419258..420037 + 259 152979885 gip mma_0380 - hydroxypyruvate isomerase 381 51.58 0 420135..421022 + 295 152980168 garR2 mma_0381 - 2-hydroxy-3-oxopropionate reductase 382 56.95 0 421111..422376 + 421 152980672 ttuD mma_0382 - hydroxypyruvate reductase 383 53.56 0 422453..423871 + 472 152980607 pyk mma_0383 - pyruvate kinase 384 53.50 0 424278..426191 + 637 152980075 thiC mma_0384 - thiamine biosynthesis protein 385 59.31 +1 426191..426394 + 67 152982020 thiS2 mma_0385 - thiamine biosynthesis protein ThiS 386 57.02 0 426469..427266 + 265 152980962 thiG2 mma_0386 - thiamine biosynthesis protein 387 55.01 0 427380..428357 + 325 152981242 qor1 mma_0387 - NADPH2:quinone reductase 388 54.94 0 428430..429410 - 326 152981488 - mma_0388 - LysR family transcriptional regulator 389 51.49 0 429555..429890 + 111 152983199 - mma_0389 - hypothetical protein 390 51.93 0 430301..431467 + 388 152980238 sucC mma_0390 - succinyl-CoA synthetase beta chain 391 52.40 0 431470..432345 + 291 152980019 sucD mma_0391 - succinyl-CoA synthetase subunit alpha 392 49.74 -1 432563..433330 + 255 152981382 - mma_0392 - FAA-hydrolase family protein 393 52.72 0 433350..434360 + 336 152980035 apbA mma_0393 - 2-dehydropantoate 2-reductase 394 49.08 -1 435026..436054 + 342 152981073 tctC2 mma_0394 - tricarboxylate binding receptor 395 48.66 -1 436170..436691 + 173 152982783 tctB2 mma_0395 - small permease component of tripartite tricarboxylate transporter 396 52.22 0 436764..438293 + 509 152981013 tctA2 mma_0396 - tricarboxylate transport protein TctA 397 54.44 0 438531..439364 + 277 152982485 - mma_0397 - hypothetical protein 398 49.26 -1 439418..440026 - 202 152982277 - mma_0398 - hypothetical protein 399 51.72 0 440313..442025 + 570 152980239 oxc mma_0399 - putative oxalyl-CoA decarboxylase 400 49.29 -1 442277..443536 + 419 152979919 - mma_0400 - formyl-coenzyme A transferase 401 54.44 0 444623..445873 + 416 152981165 caiB1 mma_0401 - formyl-coenzyme A transferase 402 54.81 0 446618..448321 + 567 152980298 fdhB1 mma_0402 - formate dehydrogenase beta subunit 403 53.19 0 448353..451193 + 946 152981034 fdhA1 mma_0403 - formate dehydrogenase alpha subunit 404 58.64 0 451277..452173 - 298 152982128 - mma_0404 - transporter of the DMT superfamily 405 52.55 0 452263..453126 + 287 152981362 fdhD1 mma_0405 - formate dehydrogenase accessory protein fdhD 406 54.72 0 453149..454663 - 504 152982689 dadA1 mma_0406 - D-amino-acid dehydrogenase 407 50.00 -1 454806..455141 + 111 152982894 - mma_0407 - hypothetical protein 408 52.16 0 455237..455560 - 107 152981896 glnB1 mma_0408 - nitrogen regulatory protein PII 409 56.19 0 455632..458733 - 1033 152980988 czcA2 mma_0409 - acriflavin resistance protein:heavy metal efflux pump 410 58.59 0 458738..459889 - 383 152981912 czcB2 mma_0410 - cation efflux protein 411 58.15 0 459886..461130 - 414 152981764 - mma_0411 - outer membrane cation efflux system protein 412 56.19 0 461219..461743 - 174 152982428 - mma_0412 - hypothetical protein 413 57.72 0 461939..463078 - 379 152980276 ubiH mma_0413 - 2-octaprenyl-6-methoxyphenol hydroxylase 414 56.76 0 463089..464420 - 443 152980549 pepP mma_0414 - X-Pro aminopeptidase 415 56.07 0 464417..465133 - 238 152982188 - mma_0415 - nucleotidyl transferase 416 55.11 0 465233..466270 - 345 152981139 - mma_0416 - hypothetical protein 417 52.26 0 466372..468627 + 751 152979883 ostA mma_0417 - OstA organic solvent tolerance protein 418 54.26 0 468650..470059 + 469 152982039 surA mma_0418 - peptidyl-prolyl cis-trans isomerase SurA 419 56.69 0 470087..471118 + 343 152980362 pdxA mma_0419 - 4-hydroxythreonine-4-phosphate dehydrogenase 420 56.51 0 471163..471930 + 255 152979807 ksgA mma_0420 - dimethyladenosine transferase 421 53.19 0 472018..472425 + 135 152982021 gloA1 mma_0421 - lactoylglutathione lyase 422 56.26 0 472473..473375 - 300 152981584 - mma_0422 - hypothetical protein 54.72 MEAN 4.12 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.