version 1.0
Janthinobacterium sp. Marseille, complete genome - 1..4110251 3697 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 303 59.33 +1 341296..341745 + 149 152981363 dtd mma_0303 - D-tyrosyl-tRNA(Tyr) deacylase 304 59.26 +1 341818..342465 + 215 152981766 - mma_0304 - phospholipid-binding protein 305 57.08 0 342491..343126 + 211 152980161 gpm1 mma_0305 - phosphoglycerate mutase 306 56.44 0 343254..344270 + 338 152981141 - mma_0306 - tRNA-dihydrouridine synthase 307 49.08 -1 344203..344583 + 126 152980681 fis mma_0307 - Fis family transcriptional regulator 308 55.75 0 344716..346281 + 521 152979939 purH mma_0308 - bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 309 58.56 0 346338..346880 + 180 152979958 ruvC mma_0309 - crossover junction endodeoxyribonuclease 310 55.90 0 346922..347497 + 191 152980261 ruvA mma_0310 - RuvA holliday junction DNA helicase 311 58.64 0 347533..348591 + 352 152979831 ruvB mma_0311 - Holliday junction DNA helicase B 312 57.89 0 348640..349095 + 151 152981470 - mma_0312 - hypothetical protein 313 56.82 0 349286..350128 + 280 152981810 mhpD mma_0313 - 2-keto-4-pentenoate hydratase 314 56.79 0 350218..351867 - 549 152981410 tar6 mma_0314 - methyl-accepting chemotaxis protein 315 56.35 0 352156..355053 - 965 152980087 valS mma_0315 - valyl-tRNA synthetase 316 61.27 +1 355319..355522 + 67 152983196 thiS1 mma_0316 - thiamine biosynthesis protein ThiS 317 56.55 0 355557..356426 + 289 152979980 thiG1 mma_0317 - thiamine biosynthesis protein 318 56.73 0 356461..357084 + 207 152980710 thiE mma_0318 - thiamine-phosphate pyrophosphorylase 319 54.71 0 357239..359521 + 760 152981250 uvrD mma_0319 - DNA helicase II / ATP-dependent DNA helicase 320 54.65 0 359563..360336 - 257 152980301 - mma_0320 - hypothetical protein 321 53.87 0 360336..361304 - 322 152979890 thrB mma_0321 - homoserine kinase 322 57.11 0 361396..361803 - 135 152982520 - mma_0322 - hypothetical protein 323 53.89 0 362071..364809 + 912 152980489 polA mma_0323 - DNA polymerase I 324 56.38 0 364914..365798 + 294 152980342 - mma_0324 - carboxymethylenebutenolidase 325 55.51 0 366034..366705 + 223 152980477 - mma_0325 - ZIP zinc transporter 326 58.27 0 366726..367571 - 281 152980059 sseA2 mma_0326 - thiosulfate sulfurtransferase 327 57.38 0 367595..368509 - 304 152980592 - mma_0327 - transporter of the DMT superfamily 328 53.51 0 368648..369901 - 417 152980174 - mma_0328 - dioxygenase (alpha subunit) oxidoreductase protein 329 55.69 0 370104..370358 + 84 152983197 xseB mma_0329 - exodeoxyribonuclease VII small subunit 330 59.07 +1 370406..371248 + 280 152979918 ispA mma_0330 - geranyltranstransferase 331 55.73 0 371250..373115 + 621 152979790 dxs mma_0331 - 1-deoxy-D-xylulose-5-phosphate synthase 332 53.16 0 373168..373974 + 268 152979889 - mma_0332 - putative GTP cyclohydrolase 333 56.38 0 374045..374608 - 187 152979973 - mma_0333 - hypothetical protein 334 57.64 0 374835..375731 + 298 152980163 - mma_0334 - transcriptional regulator 335 57.59 0 375899..377386 + 495 152979945 glcD1 mma_0335 - glycolate oxidase (fad-linked subunit) oxidoreductase protein 336 58.52 0 377415..378470 + 351 152980441 glcE mma_0336 - glycolate oxidase, subunit GlcE 337 54.50 0 378514..379746 + 410 152980162 glcF mma_0337 - glycolate oxidase iron-sulfur subunit 338 53.29 0 379819..380304 - 161 152980104 bsaA mma_0338 - glutathione peroxidase 339 53.39 0 380301..381437 - 378 152980677 pilU1 mma_0339 - PilU twitching motility protein 340 56.70 0 381539..382582 - 347 152980378 pilT mma_0340 - PilT twitching motility protein 341 55.74 0 382702..383406 + 234 152980093 - mma_0341 - hypothetical protein 342 57.45 0 383396..384220 + 274 152979991 proC mma_0342 - pyrroline-5-carboxylate reductase 343 54.36 0 384309..384755 - 148 152980465 - mma_0343 - hypothetical protein 344 55.89 0 384915..385415 - 166 152980066 - mma_0344 - acetyltransferase 345 56.49 0 385429..386067 - 212 152980668 - mma_0345 - ThiJ/PfpI family protein 346 57.69 0 386105..387541 - 478 152980367 - mma_0346 - major facilitator superfamily drug efflux transporter 347 56.84 0 387557..388411 - 284 152980249 ubiA mma_0347 - 4-hydroxybenzoate octaprenyltransferase 348 58.13 0 388462..389457 - 331 152980366 oxyR mma_0348 - OxyR hydrogen peroxide-inducible genes activator 349 57.75 0 389468..391699 - 743 152980116 recG mma_0349 - RecG-like helicase 350 55.56 0 391823..392848 + 341 152980695 queA mma_0350 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase 351 54.26 0 392842..393969 + 375 152980105 tgt mma_0351 - queuine/archaeosine tRNA-ribosyltransferase 352 49.07 -1 394073..394396 + 107 152980538 yajC mma_0352 - preprotein translocase subunit YajC 353 54.62 0 394476..396335 + 619 152980440 secD mma_0353 - preprotein translocase SecD subunit 354 51.64 0 396458..397402 + 314 152979888 secF mma_0354 - preprotein translocase subunit SecF 355 54.44 0 397467..397916 - 149 152981973 - mma_0355 - MarR family transcriptional regulator 356 50.88 0 398001..398570 - 189 152979972 - mma_0356 - hypothetical protein 357 51.56 0 398635..399210 - 191 152980568 - mma_0357 - hypothetical protein 358 59.81 +1 399237..399761 - 174 152980646 cybB1 mma_0358 - cytochrome B561 359 54.90 0 399865..401232 - 455 152979778 purB mma_0359 - adenylosuccinate lyase 360 52.78 0 401432..402043 + 203 152980248 gst1 mma_0360 - glutathione S-transferase 361 49.48 -1 402111..402587 - 158 152980645 bfr1 mma_0361 - bacterioferritin (cytochrome b1) 362 47.89 -1 402799..403272 - 157 152980661 bfr2 mma_0362 - bacterioferritin (cytochrome b1) 363 50.85 0 403585..403995 - 136 152980542 exbD3 mma_0363 - biopolymer transport protein ExbD 364 56.79 0 403995..404723 - 242 152981614 exbB2 mma_0364 - biopolymer transport protein ExbB 365 55.90 0 404736..405422 - 228 152982893 tonB mma_0365 - TonB-like protein 366 49.07 -1 405434..405649 - 71 152983198 bfd mma_0366 - bacterioferritin-associated ferredoxin protein 367 53.58 0 405746..406066 - 106 152983348 - mma_0367 - hypothetical protein 368 56.75 0 406580..408202 - 540 152980948 - mma_0368 - glutamate synthase large subunit 369 50.94 0 408569..409528 + 319 152981902 - mma_0369 - hypothetical protein 370 52.56 0 409534..409845 + 103 152982413 - mma_0370 - hypothetical protein 371 48.24 -1 409845..410213 + 122 152981962 - mma_0371 - hypothetical protein 372 51.65 0 410220..410885 + 221 152981644 - mma_0372 - hypothetical protein 373 57.46 0 410932..412050 - 372 152981022 trmU mma_0373 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 374 56.03 0 412043..412531 - 162 152982175 - mma_0374 - MutT/NUDIX family hydrolase 375 48.89 -1 412898..413257 + 119 152980191 panD mma_0375 - aspartate alpha-decarboxylase 376 57.35 0 413382..414980 + 532 152979857 pntA mma_0376 - NAD(P) transhydrogenase subunit alpha 377 53.59 0 414991..416397 + 468 152979867 pntB mma_0377 - NAD(P) transhydrogenase subunit beta 378 56.95 0 416495..417400 - 301 152981563 - mma_0378 - LysR family transcriptional regulator 379 51.69 0 417508..419256 + 582 152981070 gcl mma_0379 - glyoxylate carboligase 380 49.10 -1 419258..420037 + 259 152979885 gip mma_0380 - hydroxypyruvate isomerase 381 51.58 0 420135..421022 + 295 152980168 garR2 mma_0381 - 2-hydroxy-3-oxopropionate reductase 382 56.95 0 421111..422376 + 421 152980672 ttuD mma_0382 - hydroxypyruvate reductase 383 53.56 0 422453..423871 + 472 152980607 pyk mma_0383 - pyruvate kinase 384 53.50 0 424278..426191 + 637 152980075 thiC mma_0384 - thiamine biosynthesis protein 385 59.31 +1 426191..426394 + 67 152982020 thiS2 mma_0385 - thiamine biosynthesis protein ThiS 386 57.02 0 426469..427266 + 265 152980962 thiG2 mma_0386 - thiamine biosynthesis protein 387 55.01 0 427380..428357 + 325 152981242 qor1 mma_0387 - NADPH2:quinone reductase 388 54.94 0 428430..429410 - 326 152981488 - mma_0388 - LysR family transcriptional regulator 389 51.49 0 429555..429890 + 111 152983199 - mma_0389 - hypothetical protein 390 51.93 0 430301..431467 + 388 152980238 sucC mma_0390 - succinyl-CoA synthetase beta chain 391 52.40 0 431470..432345 + 291 152980019 sucD mma_0391 - succinyl-CoA synthetase subunit alpha 392 49.74 -1 432563..433330 + 255 152981382 - mma_0392 - FAA-hydrolase family protein 393 52.72 0 433350..434360 + 336 152980035 apbA mma_0393 - 2-dehydropantoate 2-reductase 394 49.08 -1 435026..436054 + 342 152981073 tctC2 mma_0394 - tricarboxylate binding receptor 395 48.66 -1 436170..436691 + 173 152982783 tctB2 mma_0395 - small permease component of tripartite tricarboxylate transporter 396 52.22 0 436764..438293 + 509 152981013 tctA2 mma_0396 - tricarboxylate transport protein TctA 397 54.44 0 438531..439364 + 277 152982485 - mma_0397 - hypothetical protein 398 49.26 -1 439418..440026 - 202 152982277 - mma_0398 - hypothetical protein 399 51.72 0 440313..442025 + 570 152980239 oxc mma_0399 - putative oxalyl-CoA decarboxylase 400 49.29 -1 442277..443536 + 419 152979919 - mma_0400 - formyl-coenzyme A transferase 401 54.44 0 444623..445873 + 416 152981165 caiB1 mma_0401 - formyl-coenzyme A transferase 402 54.81 0 446618..448321 + 567 152980298 fdhB1 mma_0402 - formate dehydrogenase beta subunit 54.72 MEAN 4.12 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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