version 1.0
Janthinobacterium sp. Marseille, complete genome - 1..4110251 3697 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3367 52.29 0 3746912..3747523 - 203 152980399 pilN mma_3367 - PilN type IV pilus assembly protein 3368 51.99 0 3747520..3748602 - 360 152981026 pilM mma_3368 - PilM type IV pilus assembly protein 3369 55.40 0 3749035..3751323 + 762 152981042 pbp mma_3369 - penicillin-binding protein 3370 53.69 0 3751400..3751738 - 112 152981796 cyaY mma_3370 - frataxin-like protein 3371 53.97 0 3751997..3753280 + 427 152979892 lysA mma_3371 - diaminopimelate decarboxylase 3372 53.89 0 3753320..3753961 - 213 152981541 - mma_3372 - hypothetical protein 3373 54.29 0 3754005..3754982 - 325 152981294 - mma_3373 - putative sulfite oxidase subunit YedY 3374 54.95 0 3755129..3756280 - 383 152981762 - mma_3374 - cytochrome c assembly family protein 3375 52.12 0 3756427..3758550 - 707 152981167 - mma_3375 - cytochrome C-type biogenesis transmembrane protein 3376 52.12 0 3758684..3759343 - 219 152981922 - mma_3376 - cytochrome c, class I 3377 54.52 0 3759503..3760210 + 235 152981348 engB mma_3377 - GTP-binding protein EngB 3378 56.71 0 3760432..3761445 + 337 152980170 hemB mma_3378 - delta-aminolevulinic acid dehydratase 3379 48.98 -1 3761512..3762150 - 212 152981345 lsfA mma_3379 - antioxidant protein LsfA 3380 55.35 0 3762276..3764078 - 600 152981155 dsbD2 mma_3380 - thiol:disulfide interchange protein 3381 50.88 0 3764071..3764412 - 113 152979932 cutA mma_3381 - CutA protein 3382 50.51 -1 3764430..3765215 - 261 152979811 nodJ mma_3382 - ABC-2 type transport system permease protein 3383 58.95 +1 3765212..3766144 - 310 152980457 nodI mma_3383 - ABC-2 type transport system ATP-binding protein 3384 52.02 0 3766261..3766656 - 131 152980583 rplQ mma_3384 - large subunit ribosomal protein L17 3385 52.04 0 3766792..3767769 - 325 152980446 rpoA mma_3385 - DNA-directed RNA polymerase subunit alpha 3386 50.00 -1 3767863..3768486 - 207 152980403 rpsD mma_3386 - 30S ribosomal protein S4 3387 53.33 0 3768668..3769072 - 134 152980206 rpsK mma_3387 - 30S ribosomal protein S11 3388 51.09 0 3769118..3769483 - 121 152980690 rpsM mma_3388 - 30S ribosomal protein S13 3389 50.00 -1 3769512..3769625 - 37 152982887 rpmJ mma_3389 - 50S ribosomal protein L36 3390 43.38 -2 3769666..3769884 - 72 152982888 infA mma_3390 - translation initiation factor IF-1 3391 50.38 -1 3769909..3771240 - 443 152980370 secY mma_3391 - preprotein translocase SecY subunit 3392 52.55 0 3771268..3771699 - 143 152980419 rplO mma_3392 - large subunit ribosomal protein L15 3393 49.44 -1 3771726..3771905 - 59 152983168 rpmD mma_3393 - 50S ribosomal protein L30 3394 50.29 -1 3771916..3772434 - 172 152979903 rpsE mma_3394 - 30S ribosomal protein S5 3395 55.37 0 3772447..3772809 - 120 152980418 rplR mma_3395 - large subunit ribosomal protein L18 3396 50.75 0 3772819..3773352 - 177 152980508 rplF mma_3396 - large subunit ribosomal protein L6 3397 50.25 -1 3773363..3773758 - 131 152980600 rpsH mma_3397 - small subunit ribosomal protein S8 3398 51.24 0 3773773..3774135 - 120 152979855 rpsN mma_3398 - 30S ribosomal protein S14 3399 47.04 -1 3774086..3774625 - 179 152980148 rplE mma_3399 - large subunit ribosomal protein L5 3400 47.94 -1 3774632..3774946 - 104 152979792 rplX mma_3400 - large subunit ribosomal protein L24 3401 51.49 0 3774956..3775324 - 122 152981453 rplN mma_3401 - large subunit ribosomal protein L14 3402 47.62 -1 3775552..3775824 - 90 152979921 rpsQ mma_3402 - small subunit ribosomal protein S17 3403 44.79 -2 3775824..3776015 - 63 152983169 rpmC mma_3403 - 50S ribosomal protein L29 3404 52.14 0 3776027..3776446 - 139 152981468 rplP mma_3404 - 50S ribosomal protein L16 3405 52.82 0 3776449..3777300 - 283 152980649 rpsC mma_3405 - small subunit ribosomal protein S3 3406 48.95 -1 3777310..3777642 - 110 152980507 rplV mma_3406 - large subunit ribosomal protein L22 3407 48.55 -1 3777649..3777924 - 91 152983170 rpsS mma_3407 - 30S ribosomal protein S19 3408 55.07 0 3777934..3778761 - 275 152980519 rplB mma_3408 - 50S ribosomal protein L2 3409 49.06 -1 3778761..3779078 - 105 152980180 rplW mma_3409 - 50S ribosomal protein L23 3410 50.89 0 3779075..3779695 - 206 152980648 rplD mma_3410 - large subunit ribosomal protein L4 3411 52.74 0 3779699..3780373 - 224 152980599 rplC mma_3411 - large subunit ribosomal protein L3 3412 50.15 -1 3780597..3780929 - 110 152980232 rpsJ mma_3412 - small subunit ribosomal protein S10 3413 51.97 0 3781019..3782209 - 396 152981101 tuf1 mma_3413 - elongation factor Tu 3414 50.64 0 3782338..3784446 - 702 152980195 fusA mma_3414 - EF-G elongation factor 3415 49.89 -1 3784569..3785039 - 156 152979905 rpsG mma_3415 - 30S ribosomal protein S7 3416 51.82 0 3785174..3785557 - 127 152980527 rpsL mma_3416 - 30S ribosomal protein S12 3417 53.69 0 3785856..3786980 - 374 152980346 hmuS mma_3417 - hemin transport protein 3418 53.20 0 3787046..3789310 - 754 152980421 - mma_3418 - TonB-dependent haemoglobin/transferrin/lactoferrin receptor 3419 53.19 0 3789673..3793917 - 1414 152981112 rpoC mma_3419 - DNA-directed RNA polymerase subunit beta' 3420 53.16 0 3794180..3797902 - 1240 152980439 rpoB mma_3420 - DNA-directed RNA polymerase, beta subunit/140 kD subunit 3421 51.20 0 3798552..3798926 - 124 152980013 rplL mma_3421 - large subunit ribosomal protein L7/L12 3422 53.37 0 3799022..3799570 - 182 152980702 rplJ mma_3422 - large subunit ribosomal protein L10 3423 49.57 -1 3799885..3800580 - 231 152980234 rplA mma_3423 - 50S ribosomal protein L1 3424 50.93 0 3800580..3801011 - 143 152980319 rplK mma_3424 - large subunit ribosomal protein L11 3425 50.83 0 3801150..3801749 - 199 152980025 nusG mma_3425 - transcription antitermination protein NusG 3426 49.22 -1 3801749..3802132 - 127 152980358 secE mma_3426 - preprotein translocase SecE subunit 3427 52.31 0 3802316..3803506 - 396 152981083 tuf2 mma_3427 - elongation factor Tu 3428 56.09 0 3804070..3805128 - 352 152981472 - mma_3428 - glutamine amidotransferase, class II 3429 54.84 0 3805374..3805745 + 123 152981880 arsC2 mma_3429 - arsenate reductase 3430 57.15 0 3805768..3807438 - 556 152982637 - mma_3430 - hypothetical protein 3431 56.56 0 3807637..3808863 - 408 152982523 - mma_3431 - diguanylate cyclase 3432 57.61 0 3809041..3810486 - 481 152982526 - mma_3432 - major facilitator superfamily drug efflux transporter 3433 55.03 0 3810626..3811957 - 443 152980989 - mma_3433 - hemolysin 3434 48.21 -1 3812338..3812532 - 64 152983321 - mma_3434 - hypothetical protein 3435 58.05 0 3812578..3813738 - 386 152981198 - mma_3435 - hypothetical protein 3436 60.64 +1 3813779..3814558 + 259 152982288 - mma_3436 - short chain dehydrogenase 3437 53.79 0 3814601..3814996 + 131 152979860 folB mma_3437 - dihydroneopterin aldolase 3438 54.61 0 3814998..3815951 + 317 152981386 mesJ2 mma_3438 - hypothetical protein 3439 55.83 0 3815966..3816445 - 159 152981346 - mma_3439 - hypothetical protein 3440 49.55 -1 3816488..3817381 - 297 152982625 - mma_3440 - hypothetical protein 3441 56.81 0 3817400..3818758 + 452 152979935 glmU mma_3441 - bifunctionnal glucosamine-1-phosphate N-acetyltransferase / UDP-N-acetylglucosamine pyrophosphorylase 3442 57.38 0 3818786..3819259 - 157 152981798 - mma_3442 - auxin efflux carrier 3443 57.76 0 3819407..3821224 + 605 152979849 glmS mma_3443 - D-fructose-6-phosphate amidotransferase 3444 42.49 -2 3822095..3823711 - 538 152983138 - mma_3444 - hypothetical protein 3445 40.59 -2 3823708..3825333 - 541 152983139 - mma_3445 - hypothetical protein 3446 41.57 -2 3825490..3825744 + 84 152983322 - mma_3446 - hypothetical protein 3447 42.10 -2 3825792..3827696 + 634 152983140 - mma_3447 - DNA adenine methylase 3448 45.62 -2 3827900..3829258 + 452 152983362 - mma_3448 - hypothetical protein 3449 51.00 0 3829338..3831284 + 648 152983012 - mma_3449 - TPR domain-containing protein 3450 50.20 -1 3831582..3833372 + 596 152983141 - mma_3450 - transposition protein, TnsD-related protein 3451 51.31 0 3833807..3835180 + 457 152983361 - mma_3451 - hypothetical protein 3452 49.21 -1 3835332..3836591 - 419 152983323 - mma_3452 - Tn7-like transposition protein C 3453 50.67 0 3836600..3838825 - 741 152983013 - mma_3453 - Tn7-like transposition protein B 3454 49.22 -1 3838813..3839712 - 299 152983324 tnsA mma_3454 - Tn7-like transposition protein A 3455 48.85 -1 3840392..3841216 + 274 152983360 - mma_3455 - hypothetical protein 3456 49.32 -1 3841424..3841936 - 170 152983359 - mma_3456 - hypothetical protein 3457 57.06 0 3842272..3843645 - 457 152983014 - mma_3457 - hypothetical protein 3458 52.61 0 3843661..3844542 - 293 152982138 - mma_3458 - hypothetical protein 3459 54.78 0 3844539..3845438 - 299 152983015 parB1 mma_3459 - chromosome partitionning protein parB 3460 56.39 0 3845435..3847000 - 521 152981971 - mma_3460 - recombinase 3461 55.98 0 3847170..3847637 - 155 152983142 - mma_3461 - hypothetical protein 3462 53.14 0 3848112..3849050 - 312 152983143 - mma_3462 - hypothetical protein 3463 52.37 0 3849575..3850798 + 407 152983325 - mma_3463 - hypothetical protein 3464 52.21 0 3850795..3851292 + 165 152983358 - mma_3464 - hypothetical protein 3465 53.42 0 3852033..3852998 + 321 152981615 - mma_3465 - ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic component 3466 55.07 0 3853111..3854421 + 436 152981454 - mma_3466 - xenobiotic compound monooxygenase A subunit 54.72 MEAN 4.12 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0