version 1.0
Janthinobacterium sp. Marseille, complete genome - 1..4110251 3697 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3332 57.55 0 3706765..3707181 + 138 152981620 ohr2 mma_3332 - organic hydroperoxide resistance protein 3333 54.52 0 3707249..3708541 + 430 152982354 - mma_3333 - epoxide hydrolase 3334 52.31 0 3708651..3709082 - 143 152981891 - mma_3334 - hypothetical protein 3335 56.45 0 3709379..3710758 - 459 152980671 sdaA mma_3335 - L-serine dehydratase 3336 53.47 0 3710784..3711980 - 398 152980363 hipO2 mma_3336 - hippurate hydrolase 3337 55.06 0 3712017..3713351 - 444 152982310 - mma_3337 - hypothetical protein 3338 54.39 0 3713493..3714404 + 303 152982794 - mma_3338 - LysR family transcriptional regulator 3339 53.17 0 3714473..3714961 - 162 152980525 ssb2 mma_3339 - single-strand DNA-binding protein 3340 54.88 0 3714976..3716205 - 409 152982554 - mma_3340 - major facilitator superfamily multidrug-efflux transporter 3341 55.95 0 3716343..3719207 + 954 152980946 uvrA mma_3341 - excinuclease ABC subunit A 3342 54.18 0 3719269..3720189 - 306 152981744 - mma_3342 - malonate transporter 3343 54.31 0 3720357..3721886 - 509 152982627 - mma_3343 - hypothetical protein 3344 53.20 0 3721903..3722199 - 98 152982843 - mma_3344 - transporter of the DMT superfamily small multidrug resistance(SMR) family 3345 55.75 0 3722277..3723815 - 512 152981872 - mma_3345 - hypothetical protein 3346 56.91 0 3723976..3726024 - 682 152982009 kefB3 mma_3346 - glutathione-regulated potassium-efflux system K+/H+ antiporter transmembrane protein 3347 59.38 +1 3726086..3727114 + 342 152980996 kpsF mma_3347 - polysialic acid capsule expression protein 3348 58.70 0 3727114..3727653 + 179 152981078 - mma_3348 - hypothetical protein 3349 53.60 0 3727650..3728246 + 198 152981889 - mma_3349 - hypothetical protein 3350 53.51 0 3728292..3728846 + 184 152981899 - mma_3350 - OstA-like protein 3351 56.01 0 3728848..3729588 + 246 152981012 - mma_3351 - ABC-type transport system, ATPase component 3352 54.01 0 3729607..3731076 + 489 152980475 rpoN mma_3352 - RNA polymerase factor sigma-54 3353 45.20 -2 3731180..3731533 + 117 152983136 - mma_3353 - sigma-54 modulation protein 3354 50.08 -1 3731628..3732290 - 220 152983363 - mma_3354 - tonB like protein 3355 48.64 -1 3732299..3736048 - 1249 152983008 pilY1 mma_3355 - type IV fimbrial biogenesis protein PilY1 3356 47.26 -1 3736113..3736787 - 224 152983009 pilX2 mma_3356 - type IV pilus assembly protein PilX 3357 49.86 -1 3736784..3737884 - 366 152983010 pilW2 mma_3357 - type IV pilus assembly protein PilW 3358 52.61 0 3737901..3738341 - 146 152982115 pilV mma_3358 - hypothetical protein 3359 55.34 0 3738343..3738951 - 202 152983137 - mma_3359 - type IV pilus assembly related protein 3360 51.95 0 3738945..3739406 - 153 152983011 pilE3 mma_3360 - type IV pilus biogenesis protein PilE 3361 55.56 0 3739539..3740663 + 374 152979927 - mma_3361 - enoyl(3-hydroxyisobutyryl)-coenzyme A hydratase protein 3362 53.70 0 3740682..3741830 - 382 152980392 dgt mma_3362 - dGTPase 3363 54.50 0 3741870..3743603 - 577 152980219 aroKB mma_3363 - bifunctional shikimate kinase/3-dehydroquinate synthase 3364 50.61 0 3743605..3745665 - 686 152980977 pilQ mma_3364 - PilQ type IV pilus assembly protein 3365 51.57 0 3745701..3746243 - 180 152979944 pilP mma_3365 - type IV pilus assembly protein 3366 53.73 0 3746240..3746896 - 218 152980199 pilO mma_3366 - PilO type IV pilus assembly protein 3367 52.29 0 3746912..3747523 - 203 152980399 pilN mma_3367 - PilN type IV pilus assembly protein 3368 51.99 0 3747520..3748602 - 360 152981026 pilM mma_3368 - PilM type IV pilus assembly protein 3369 55.40 0 3749035..3751323 + 762 152981042 pbp mma_3369 - penicillin-binding protein 3370 53.69 0 3751400..3751738 - 112 152981796 cyaY mma_3370 - frataxin-like protein 3371 53.97 0 3751997..3753280 + 427 152979892 lysA mma_3371 - diaminopimelate decarboxylase 3372 53.89 0 3753320..3753961 - 213 152981541 - mma_3372 - hypothetical protein 3373 54.29 0 3754005..3754982 - 325 152981294 - mma_3373 - putative sulfite oxidase subunit YedY 3374 54.95 0 3755129..3756280 - 383 152981762 - mma_3374 - cytochrome c assembly family protein 3375 52.12 0 3756427..3758550 - 707 152981167 - mma_3375 - cytochrome C-type biogenesis transmembrane protein 3376 52.12 0 3758684..3759343 - 219 152981922 - mma_3376 - cytochrome c, class I 3377 54.52 0 3759503..3760210 + 235 152981348 engB mma_3377 - GTP-binding protein EngB 3378 56.71 0 3760432..3761445 + 337 152980170 hemB mma_3378 - delta-aminolevulinic acid dehydratase 3379 48.98 -1 3761512..3762150 - 212 152981345 lsfA mma_3379 - antioxidant protein LsfA 3380 55.35 0 3762276..3764078 - 600 152981155 dsbD2 mma_3380 - thiol:disulfide interchange protein 3381 50.88 0 3764071..3764412 - 113 152979932 cutA mma_3381 - CutA protein 3382 50.51 -1 3764430..3765215 - 261 152979811 nodJ mma_3382 - ABC-2 type transport system permease protein 3383 58.95 +1 3765212..3766144 - 310 152980457 nodI mma_3383 - ABC-2 type transport system ATP-binding protein 3384 52.02 0 3766261..3766656 - 131 152980583 rplQ mma_3384 - large subunit ribosomal protein L17 3385 52.04 0 3766792..3767769 - 325 152980446 rpoA mma_3385 - DNA-directed RNA polymerase subunit alpha 3386 50.00 -1 3767863..3768486 - 207 152980403 rpsD mma_3386 - 30S ribosomal protein S4 3387 53.33 0 3768668..3769072 - 134 152980206 rpsK mma_3387 - 30S ribosomal protein S11 3388 51.09 0 3769118..3769483 - 121 152980690 rpsM mma_3388 - 30S ribosomal protein S13 3389 50.00 -1 3769512..3769625 - 37 152982887 rpmJ mma_3389 - 50S ribosomal protein L36 3390 43.38 -2 3769666..3769884 - 72 152982888 infA mma_3390 - translation initiation factor IF-1 3391 50.38 -1 3769909..3771240 - 443 152980370 secY mma_3391 - preprotein translocase SecY subunit 3392 52.55 0 3771268..3771699 - 143 152980419 rplO mma_3392 - large subunit ribosomal protein L15 3393 49.44 -1 3771726..3771905 - 59 152983168 rpmD mma_3393 - 50S ribosomal protein L30 3394 50.29 -1 3771916..3772434 - 172 152979903 rpsE mma_3394 - 30S ribosomal protein S5 3395 55.37 0 3772447..3772809 - 120 152980418 rplR mma_3395 - large subunit ribosomal protein L18 3396 50.75 0 3772819..3773352 - 177 152980508 rplF mma_3396 - large subunit ribosomal protein L6 3397 50.25 -1 3773363..3773758 - 131 152980600 rpsH mma_3397 - small subunit ribosomal protein S8 3398 51.24 0 3773773..3774135 - 120 152979855 rpsN mma_3398 - 30S ribosomal protein S14 3399 47.04 -1 3774086..3774625 - 179 152980148 rplE mma_3399 - large subunit ribosomal protein L5 3400 47.94 -1 3774632..3774946 - 104 152979792 rplX mma_3400 - large subunit ribosomal protein L24 3401 51.49 0 3774956..3775324 - 122 152981453 rplN mma_3401 - large subunit ribosomal protein L14 3402 47.62 -1 3775552..3775824 - 90 152979921 rpsQ mma_3402 - small subunit ribosomal protein S17 3403 44.79 -2 3775824..3776015 - 63 152983169 rpmC mma_3403 - 50S ribosomal protein L29 3404 52.14 0 3776027..3776446 - 139 152981468 rplP mma_3404 - 50S ribosomal protein L16 3405 52.82 0 3776449..3777300 - 283 152980649 rpsC mma_3405 - small subunit ribosomal protein S3 3406 48.95 -1 3777310..3777642 - 110 152980507 rplV mma_3406 - large subunit ribosomal protein L22 3407 48.55 -1 3777649..3777924 - 91 152983170 rpsS mma_3407 - 30S ribosomal protein S19 3408 55.07 0 3777934..3778761 - 275 152980519 rplB mma_3408 - 50S ribosomal protein L2 3409 49.06 -1 3778761..3779078 - 105 152980180 rplW mma_3409 - 50S ribosomal protein L23 3410 50.89 0 3779075..3779695 - 206 152980648 rplD mma_3410 - large subunit ribosomal protein L4 3411 52.74 0 3779699..3780373 - 224 152980599 rplC mma_3411 - large subunit ribosomal protein L3 3412 50.15 -1 3780597..3780929 - 110 152980232 rpsJ mma_3412 - small subunit ribosomal protein S10 3413 51.97 0 3781019..3782209 - 396 152981101 tuf1 mma_3413 - elongation factor Tu 3414 50.64 0 3782338..3784446 - 702 152980195 fusA mma_3414 - EF-G elongation factor 3415 49.89 -1 3784569..3785039 - 156 152979905 rpsG mma_3415 - 30S ribosomal protein S7 3416 51.82 0 3785174..3785557 - 127 152980527 rpsL mma_3416 - 30S ribosomal protein S12 3417 53.69 0 3785856..3786980 - 374 152980346 hmuS mma_3417 - hemin transport protein 3418 53.20 0 3787046..3789310 - 754 152980421 - mma_3418 - TonB-dependent haemoglobin/transferrin/lactoferrin receptor 3419 53.19 0 3789673..3793917 - 1414 152981112 rpoC mma_3419 - DNA-directed RNA polymerase subunit beta' 3420 53.16 0 3794180..3797902 - 1240 152980439 rpoB mma_3420 - DNA-directed RNA polymerase, beta subunit/140 kD subunit 3421 51.20 0 3798552..3798926 - 124 152980013 rplL mma_3421 - large subunit ribosomal protein L7/L12 3422 53.37 0 3799022..3799570 - 182 152980702 rplJ mma_3422 - large subunit ribosomal protein L10 3423 49.57 -1 3799885..3800580 - 231 152980234 rplA mma_3423 - 50S ribosomal protein L1 3424 50.93 0 3800580..3801011 - 143 152980319 rplK mma_3424 - large subunit ribosomal protein L11 3425 50.83 0 3801150..3801749 - 199 152980025 nusG mma_3425 - transcription antitermination protein NusG 3426 49.22 -1 3801749..3802132 - 127 152980358 secE mma_3426 - preprotein translocase SecE subunit 3427 52.31 0 3802316..3803506 - 396 152981083 tuf2 mma_3427 - elongation factor Tu 3428 56.09 0 3804070..3805128 - 352 152981472 - mma_3428 - glutamine amidotransferase, class II 3429 54.84 0 3805374..3805745 + 123 152981880 arsC2 mma_3429 - arsenate reductase 3430 57.15 0 3805768..3807438 - 556 152982637 - mma_3430 - hypothetical protein 3431 56.56 0 3807637..3808863 - 408 152982523 - mma_3431 - diguanylate cyclase 54.72 MEAN 4.12 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.