version 1.0
Janthinobacterium sp. Marseille, complete genome - 1..4110251 3697 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 272 54.83 0 306524..307300 + 258 152982509 - mma_0272 - hypothetical protein 273 55.16 0 307341..308531 - 396 152980560 hipO1 mma_0273 - hippurate hydrolase 274 55.79 0 308751..309881 + 376 152980939 - mma_0274 - hypothetical protein 275 53.06 0 309994..311676 + 560 152980122 fadD mma_0275 - long-chain fatty-acid-CoA ligase 276 54.68 0 311749..312165 - 138 152980455 - mma_0276 - acyl-CoA thioester hydrolase 277 53.94 0 312243..314135 + 630 152981278 atm1 mma_0277 - ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components 278 58.42 0 314245..315615 + 456 152980045 gdhA1 mma_0278 - glutamate dehydrogenase (NAD(P)+) 279 50.39 -1 315725..316627 + 300 152981667 gltI mma_0279 - solute-binding periplasmic protein of glutamate/aspartate ABC transporter 280 56.56 0 316689..317420 + 243 152981390 gltJ mma_0280 - glutamate/aspartate ABC type transport system permease protein 281 52.98 0 317413..318099 + 228 152982686 gltK mma_0281 - ABC-type glutamate/aspartate transport system permease protein 282 56.06 0 318110..318835 + 241 152980589 gltL mma_0282 - glutamate/aspartate ABC type transport system ATP-binding protein 283 56.75 0 318936..319994 + 352 152980376 pyrC1 mma_0283 - dihydroorotase 284 55.72 0 320014..320808 + 264 152982632 - mma_0284 - hypothetical protein 285 56.81 0 320871..322463 - 530 152981337 tolC3 mma_0285 - outer membrane protein, tolC-like 286 57.13 0 322472..325618 - 1048 152981240 czcA1 mma_0286 - CzcA family heavy metal efflux protein 287 57.61 0 325611..326780 - 389 152981890 czcB1 mma_0287 - cation efflux system protein 288 56.29 0 326967..328286 - 439 152982293 ragB mma_0288 - two-component sensor histidine kinase 289 58.30 0 328328..329068 - 246 152981344 ragA mma_0289 - two-components system response regulator 290 51.60 0 329258..330352 - 364 152981617 - mma_0290 - outer membrane porin 291 54.97 0 330696..331883 - 395 152981746 - mma_0291 - porin 292 60.93 +1 332109..332735 + 208 152981389 coq7 mma_0292 - ubiquinone biosynthesis protein 293 58.28 0 332832..333272 - 146 152981695 - mma_0293 - OsmC-like protein 294 53.15 0 333589..334017 + 142 152980317 rplM mma_0294 - 50S ribosomal protein L13 295 53.44 0 334027..334419 + 130 152980472 rpsI mma_0295 - small subunit ribosomal protein S9 296 55.78 0 334568..335605 + 345 152979967 argC mma_0296 - N-acetyl-gamma-glutamyl-phosphate reductase 297 53.44 0 335623..336378 + 251 152982612 - mma_0297 - hypothetical protein 298 50.75 0 336391..336792 + 133 152981914 - mma_0298 - hypothetical protein 299 50.43 -1 336843..337193 + 116 152981570 - mma_0299 - iron-sulfur cluster insertion protein ErpA 300 60.39 +1 337295..338425 - 376 152981051 - mma_0300 - anhydro-N-acetylmuramic acid kinase 301 55.63 0 338520..339887 - 455 152981639 - mma_0301 - hypothetical protein 302 54.75 0 340044..341285 + 413 152980601 tyrS mma_0302 - tyrosyl-tRNA synthetase 303 59.33 +1 341296..341745 + 149 152981363 dtd mma_0303 - D-tyrosyl-tRNA(Tyr) deacylase 304 59.26 +1 341818..342465 + 215 152981766 - mma_0304 - phospholipid-binding protein 305 57.08 0 342491..343126 + 211 152980161 gpm1 mma_0305 - phosphoglycerate mutase 306 56.44 0 343254..344270 + 338 152981141 - mma_0306 - tRNA-dihydrouridine synthase 307 49.08 -1 344203..344583 + 126 152980681 fis mma_0307 - Fis family transcriptional regulator 308 55.75 0 344716..346281 + 521 152979939 purH mma_0308 - bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 309 58.56 0 346338..346880 + 180 152979958 ruvC mma_0309 - crossover junction endodeoxyribonuclease 310 55.90 0 346922..347497 + 191 152980261 ruvA mma_0310 - RuvA holliday junction DNA helicase 311 58.64 0 347533..348591 + 352 152979831 ruvB mma_0311 - Holliday junction DNA helicase B 312 57.89 0 348640..349095 + 151 152981470 - mma_0312 - hypothetical protein 313 56.82 0 349286..350128 + 280 152981810 mhpD mma_0313 - 2-keto-4-pentenoate hydratase 314 56.79 0 350218..351867 - 549 152981410 tar6 mma_0314 - methyl-accepting chemotaxis protein 315 56.35 0 352156..355053 - 965 152980087 valS mma_0315 - valyl-tRNA synthetase 316 61.27 +1 355319..355522 + 67 152983196 thiS1 mma_0316 - thiamine biosynthesis protein ThiS 317 56.55 0 355557..356426 + 289 152979980 thiG1 mma_0317 - thiamine biosynthesis protein 318 56.73 0 356461..357084 + 207 152980710 thiE mma_0318 - thiamine-phosphate pyrophosphorylase 319 54.71 0 357239..359521 + 760 152981250 uvrD mma_0319 - DNA helicase II / ATP-dependent DNA helicase 320 54.65 0 359563..360336 - 257 152980301 - mma_0320 - hypothetical protein 321 53.87 0 360336..361304 - 322 152979890 thrB mma_0321 - homoserine kinase 322 57.11 0 361396..361803 - 135 152982520 - mma_0322 - hypothetical protein 323 53.89 0 362071..364809 + 912 152980489 polA mma_0323 - DNA polymerase I 324 56.38 0 364914..365798 + 294 152980342 - mma_0324 - carboxymethylenebutenolidase 325 55.51 0 366034..366705 + 223 152980477 - mma_0325 - ZIP zinc transporter 326 58.27 0 366726..367571 - 281 152980059 sseA2 mma_0326 - thiosulfate sulfurtransferase 327 57.38 0 367595..368509 - 304 152980592 - mma_0327 - transporter of the DMT superfamily 328 53.51 0 368648..369901 - 417 152980174 - mma_0328 - dioxygenase (alpha subunit) oxidoreductase protein 329 55.69 0 370104..370358 + 84 152983197 xseB mma_0329 - exodeoxyribonuclease VII small subunit 330 59.07 +1 370406..371248 + 280 152979918 ispA mma_0330 - geranyltranstransferase 331 55.73 0 371250..373115 + 621 152979790 dxs mma_0331 - 1-deoxy-D-xylulose-5-phosphate synthase 332 53.16 0 373168..373974 + 268 152979889 - mma_0332 - putative GTP cyclohydrolase 333 56.38 0 374045..374608 - 187 152979973 - mma_0333 - hypothetical protein 334 57.64 0 374835..375731 + 298 152980163 - mma_0334 - transcriptional regulator 335 57.59 0 375899..377386 + 495 152979945 glcD1 mma_0335 - glycolate oxidase (fad-linked subunit) oxidoreductase protein 336 58.52 0 377415..378470 + 351 152980441 glcE mma_0336 - glycolate oxidase, subunit GlcE 337 54.50 0 378514..379746 + 410 152980162 glcF mma_0337 - glycolate oxidase iron-sulfur subunit 338 53.29 0 379819..380304 - 161 152980104 bsaA mma_0338 - glutathione peroxidase 339 53.39 0 380301..381437 - 378 152980677 pilU1 mma_0339 - PilU twitching motility protein 340 56.70 0 381539..382582 - 347 152980378 pilT mma_0340 - PilT twitching motility protein 341 55.74 0 382702..383406 + 234 152980093 - mma_0341 - hypothetical protein 342 57.45 0 383396..384220 + 274 152979991 proC mma_0342 - pyrroline-5-carboxylate reductase 343 54.36 0 384309..384755 - 148 152980465 - mma_0343 - hypothetical protein 344 55.89 0 384915..385415 - 166 152980066 - mma_0344 - acetyltransferase 345 56.49 0 385429..386067 - 212 152980668 - mma_0345 - ThiJ/PfpI family protein 346 57.69 0 386105..387541 - 478 152980367 - mma_0346 - major facilitator superfamily drug efflux transporter 347 56.84 0 387557..388411 - 284 152980249 ubiA mma_0347 - 4-hydroxybenzoate octaprenyltransferase 348 58.13 0 388462..389457 - 331 152980366 oxyR mma_0348 - OxyR hydrogen peroxide-inducible genes activator 349 57.75 0 389468..391699 - 743 152980116 recG mma_0349 - RecG-like helicase 350 55.56 0 391823..392848 + 341 152980695 queA mma_0350 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase 351 54.26 0 392842..393969 + 375 152980105 tgt mma_0351 - queuine/archaeosine tRNA-ribosyltransferase 352 49.07 -1 394073..394396 + 107 152980538 yajC mma_0352 - preprotein translocase subunit YajC 353 54.62 0 394476..396335 + 619 152980440 secD mma_0353 - preprotein translocase SecD subunit 354 51.64 0 396458..397402 + 314 152979888 secF mma_0354 - preprotein translocase subunit SecF 355 54.44 0 397467..397916 - 149 152981973 - mma_0355 - MarR family transcriptional regulator 356 50.88 0 398001..398570 - 189 152979972 - mma_0356 - hypothetical protein 357 51.56 0 398635..399210 - 191 152980568 - mma_0357 - hypothetical protein 358 59.81 +1 399237..399761 - 174 152980646 cybB1 mma_0358 - cytochrome B561 359 54.90 0 399865..401232 - 455 152979778 purB mma_0359 - adenylosuccinate lyase 360 52.78 0 401432..402043 + 203 152980248 gst1 mma_0360 - glutathione S-transferase 361 49.48 -1 402111..402587 - 158 152980645 bfr1 mma_0361 - bacterioferritin (cytochrome b1) 362 47.89 -1 402799..403272 - 157 152980661 bfr2 mma_0362 - bacterioferritin (cytochrome b1) 363 50.85 0 403585..403995 - 136 152980542 exbD3 mma_0363 - biopolymer transport protein ExbD 364 56.79 0 403995..404723 - 242 152981614 exbB2 mma_0364 - biopolymer transport protein ExbB 365 55.90 0 404736..405422 - 228 152982893 tonB mma_0365 - TonB-like protein 366 49.07 -1 405434..405649 - 71 152983198 bfd mma_0366 - bacterioferritin-associated ferredoxin protein 367 53.58 0 405746..406066 - 106 152983348 - mma_0367 - hypothetical protein 368 56.75 0 406580..408202 - 540 152980948 - mma_0368 - glutamate synthase large subunit 369 50.94 0 408569..409528 + 319 152981902 - mma_0369 - hypothetical protein 370 52.56 0 409534..409845 + 103 152982413 - mma_0370 - hypothetical protein 371 48.24 -1 409845..410213 + 122 152981962 - mma_0371 - hypothetical protein 54.72 MEAN 4.12 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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