version 1.0
Janthinobacterium sp. Marseille, complete genome - 1..4110251 3697 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2897 54.67 0 3248142..3248666 + 174 152980524 rlpB mma_2897 - rare lipoprotein B 2898 57.82 0 3248650..3249666 + 338 152980551 holA mma_2898 - DNA polymerase III subunit delta 2899 58.81 0 3249781..3251028 + 415 152980424 proA mma_2899 - glutamate-5-semialdehyde dehydrogenase 2900 56.19 0 3251082..3251501 + 139 152981640 - mma_2900 - hypothetical protein 2901 56.55 0 3251520..3252122 + 200 152980925 nahD mma_2901 - 2-hydroxychromene-2-carboxylate isomerase 2902 56.84 0 3252230..3253450 + 406 152981177 - mma_2902 - N6-adenine-specific DNA methylase 2903 49.87 -1 3253536..3253910 + 124 152981911 - mma_2903 - glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein 2904 59.71 +1 3254051..3254740 + 229 152981365 - mma_2904 - transcriptional regulator 2905 55.74 0 3254852..3256324 + 490 152979948 gabD mma_2905 - succinate-semialdehyde dehydrogenase (NADP+) 2906 57.53 0 3256389..3257657 + 422 152982580 bcr mma_2906 - major facilitator superfamily drug (bicyclomycin) resistance translocase 2907 57.64 0 3257674..3259833 - 719 152982088 - mma_2907 - hypothetical protein 2908 57.10 0 3259996..3261762 - 588 152982821 - mma_2909 - sensory box histidine kinase/response regulator 2909 54.48 0 3261751..3262497 + 248 152981499 citB5 mma_2908 - LuxR family DNA-binding response regulator 2910 54.10 0 3262506..3263921 - 471 152982684 - mma_2910 - hypothetical protein 2911 52.38 0 3263893..3265782 - 629 152982141 - mma_2911 - hypothetical protein 2912 55.99 0 3266415..3268109 - 564 152980411 ggt5 mma_2912 - gamma-glutamyltranspeptidase 2913 54.17 0 3268311..3268862 - 183 152982672 - mma_2913 - hypothetical protein 2914 53.76 0 3268894..3270210 - 438 152981517 codA mma_2914 - cytosine deaminase 2915 58.13 0 3270235..3271827 - 530 152980349 ggt6 mma_2915 - gamma-glutamyltranspeptidase 2916 52.40 0 3271947..3272591 - 214 152981412 - mma_2916 - LuxR family DNA-binding response regulator 2917 53.52 0 3272588..3273652 - 354 152981531 - mma_2917 - Signal transduction histidine kinase 2918 52.88 0 3273695..3275101 - 468 152982250 - mma_2918 - hypothetical protein 2919 50.58 -1 3275346..3275774 - 142 152982391 usp2 mma_2919 - universal stress protein (Usp) 2920 54.98 0 3275803..3276495 - 230 152981754 - mma_2920 - TerC family integral membrane protein 2921 57.25 0 3276621..3278033 - 470 152982775 - mma_2921 - two-components system response regulator 2922 56.52 0 3278008..3278697 - 229 152981323 ompR6 mma_2922 - two components system response regulator 2923 59.19 +1 3278910..3280247 + 445 152981688 - mma_2923 - 6-aminohexanoate-dimer hydrolase 2924 54.73 0 3280388..3281443 + 351 152982125 - mma_2924 - hypothetical protein 2925 53.25 0 3281534..3282025 - 163 152981507 ohr1 mma_2925 - organic hydroperoxide resistance protein 2926 51.02 0 3282143..3282634 - 163 152982016 - mma_2927 - MarR family transcriptional regulator 2927 48.10 -1 3282618..3282827 + 69 152982992 - mma_2926 - hypothetical protein 2928 55.79 0 3282837..3283553 + 238 152981154 trmB mma_2928 - tRNA (guanine-N7-)-methyltransferase 2929 55.32 0 3283567..3285390 - 607 152980056 recQ mma_2929 - ATP-dependent DNA helicase 2930 54.20 0 3285400..3286233 - 277 152979814 bacA mma_2930 - undecaprenol kinase 2931 58.33 0 3286471..3286998 - 175 152982993 - mma_2931 - hypothetical protein 2932 54.22 0 3287116..3287766 + 216 152981335 pcm2 mma_2932 - protein-L-isoaspartate(D-aspartate) O-methyltransferase 2933 59.57 +1 3287776..3288099 + 107 152981948 - mma_2933 - hypothetical protein 2934 56.63 0 3288152..3289456 + 434 152981557 tolC6 mma_2934 - outer membrane protein, tolC-like 2935 54.36 0 3289501..3290142 - 213 152982014 acrR mma_2935 - TetR/AcrR family transcriptional regulator 2936 59.50 +1 3290388..3291656 + 422 152981741 acrA5 mma_2936 - acriflavin resistance lipoprotein A precursor 2937 55.33 0 3291669..3294818 + 1049 152980474 acrB3 mma_2937 - acriflavin resistance transmembrane protein 2938 57.54 0 3294818..3296263 + 481 152981001 - mma_2938 - drug efflux lipoprotein 2939 49.83 -1 3296361..3296657 - 98 152982723 - mma_2939 - hypothetical protein 2940 53.11 0 3296853..3297383 + 176 152982205 - mma_2940 - hypothetical protein 2941 54.85 0 3297482..3297811 + 109 152982994 - mma_2941 - virulence protein 2942 57.92 0 3297836..3299104 - 422 152980275 kdta mma_2942 - 3-deoxy-D-manno-octulosonic-acid transferase 2943 55.92 0 3299284..3300660 - 458 152981058 algC mma_2943 - phosphomannomutase 2944 56.61 0 3300962..3301786 + 274 152982132 apaH mma_2944 - diadenosine tetraphosphatase 2945 55.02 0 3301783..3302529 - 248 152980297 plsC2 mma_2945 - 1-acyl-sn-glycerol-3-phosphate acyltransferase 2946 59.11 +1 3302604..3303887 - 427 152981059 pyrC2 mma_2946 - dihydroorotase, multifunctional complex type 2947 54.90 0 3303892..3304851 - 319 152980634 pyrB mma_2947 - aspartate carbamoyltransferase catalytic chain 2948 54.96 0 3304844..3305407 - 187 152981536 pyrR1 mma_2948 - pyrimidine regulatory protein PyrR 2949 53.03 0 3305343..3305738 - 131 152981739 ruvX mma_2949 - Hollyday junction resolvase 2950 57.66 0 3305754..3306419 - 221 152981307 - mma_2950 - transcriptional regulator 2951 58.27 0 3306533..3308020 + 495 152981216 phrB mma_2951 - deoxyribodipyrimidine photo-lyase 2952 55.98 0 3308067..3313772 - 1901 152980997 - mma_2952 - two-component hybrid sensor and regulator 2953 55.37 0 3313994..3316276 - 760 152981516 pilJ mma_2953 - PilJ twitching motility protein 2954 57.12 0 3316329..3316904 - 191 152981964 pilI mma_2954 - PilI twitching motility protein 2955 51.37 0 3316915..3317280 - 121 152982489 pilH mma_2955 - twitching motility two-component response regulator transcription regulator protein 2956 51.99 0 3317301..3317702 - 133 152982173 pilG mma_2956 - PilG twitching motility two-component system response regulator 2957 55.38 0 3317854..3318048 - 64 152983300 rubA mma_2957 - rubredoxin 2958 57.83 0 3318103..3318951 + 282 152981526 thiD2 mma_2958 - phosphomethylpyrimidine kinase 2959 59.89 +1 3318985..3320283 + 432 152979840 hemL mma_2959 - glutamate-1-semialdehyde 2,1-aminomutase 2960 53.62 0 3320326..3321291 - 321 152980712 corA2 mma_2960 - Mg2+/Co2+ transporter 2961 53.88 0 3321713..3322408 - 231 152982155 mtgA mma_2961 - monofunctional biosynthetic peptidoglycan transglycosylase 2962 57.42 0 3322500..3323321 - 273 152980054 aroE mma_2962 - shikimate 5-dehydrogenase 2963 53.44 0 3323322..3324236 - 304 152980914 - mma_2963 - hypothetical protein 2964 55.91 0 3324291..3326345 - 684 152982558 - mma_2964 - exoribonuclease R 2965 60.36 +1 3326456..3327073 - 205 152980471 ubiC mma_2965 - chorismate--pyruvate lyase 2966 56.24 0 3327043..3327627 - 194 152981432 - mma_2966 - hypothetical protein 2967 57.21 0 3327624..3328997 - 457 152980991 mpl mma_2967 - UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2968 53.48 0 3329012..3329686 + 224 152982804 - mma_2968 - hypothetical protein 2969 55.94 0 3329689..3330210 + 173 152982711 - mma_2969 - thioredoxin-related transmembrane protein 2970 52.28 0 3330294..3330731 + 145 152980561 aroQ mma_2970 - 3-dehydroquinate dehydratase II 2971 55.27 0 3330811..3331275 + 154 152980262 fabE mma_2971 - biotin carboxyl carrier protein of acetyl-CoA carboxylase 2972 55.73 0 3331372..3332733 + 453 152981095 accC mma_2972 - biotin carboxylase 2973 58.52 0 3332877..3333809 + 310 152980437 prmA mma_2973 - ribosomal protein L11 methyltransferase 2974 56.60 0 3333748..3334989 + 413 152982692 - mma_2974 - hypothetical protein 2975 54.77 0 3335075..3336007 + 310 152980922 pfkB mma_2975 - sugar kinase 2976 59.12 +1 3336060..3336602 - 180 152982148 - mma_2976 - hypothetical protein 2977 45.13 -2 3336695..3337330 - 211 152983390 bph1 mma_2977 - histone H1 protein 2978 51.65 0 3337821..3338999 - 392 152980709 nrdF mma_2978 - ribonucleotide-diphosphate reductase subunit beta 2979 54.60 0 3339183..3342074 - 963 152979866 nrdA mma_2979 - ribonucleotide-diphosphate reductase subunit alpha 2980 54.72 0 3342459..3343094 - 211 152980729 ampD mma_2980 - N-acetyl-anhydromuranmyl-L-alanine amidase 2981 58.69 0 3343081..3344496 - 471 152979868 pilR mma_2981 - two-components system response regulator 2982 56.55 0 3344526..3346226 - 566 152980591 pilS mma_2982 - two-component system sensor kinase 2983 59.17 +1 3346230..3346469 - 79 152983301 - mma_2983 - hypothetical protein 2984 54.94 0 3346466..3347275 - 269 152981551 - mma_2984 - ABC-type transport system, permease component 2985 57.46 0 3347620..3348987 + 455 152980389 ffh mma_2985 - signal recognition particle, subunit SRP54 2986 48.75 -1 3349347..3349787 + 146 152982995 - mma_2986 - hypothetical protein 2987 58.94 +1 3349865..3350692 - 275 152981989 - mma_2987 - hypothetical protein 2988 56.11 0 3350625..3352358 - 577 152981235 proS mma_2988 - prolyl-tRNA synthetase 2989 57.44 0 3352561..3353145 + 194 152982856 nudH mma_2989 - dinucleoside polyphosphate hydrolase 2990 53.72 0 3353138..3353701 + 187 152982744 - mma_2990 - hypothetical protein 2991 57.82 0 3353741..3354859 - 372 152980673 proB mma_2991 - gamma-glutamyl kinase 2992 53.78 0 3354947..3356056 - 369 152981094 - mma_2992 - GTPase ObgE 2993 51.94 0 3356148..3356405 - 85 152983167 rpmA mma_2993 - 50S ribosomal protein L27 2994 48.40 -1 3356444..3356755 - 103 152980719 rplU mma_2994 - large subunit ribosomal protein L21 2995 55.92 0 3356982..3357986 + 334 152980282 ispB mma_2995 - octaprenyl-diphosphate synthase 2996 56.41 0 3358230..3359915 + 561 152980438 pilB mma_2996 - PilB type IV pilus assembly protein 54.72 MEAN 4.12 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.