version 1.0
Janthinobacterium sp. Marseille, complete genome - 1..4110251 3697 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2862 63.19 +2 3213088..3213720 + 210 152982034 - mma_2862 - RNase HI-like protein 2863 54.70 0 3213817..3214518 + 233 152981350 ompR5 mma_2863 - two-components system response regulator 2864 56.70 0 3214424..3216058 + 544 152982852 - mma_2864 - sensor histidine kinase transcription regulator protein 2865 53.41 0 3216060..3216338 + 92 152982151 - mma_2865 - hypothetical protein 2866 56.76 0 3216325..3218364 + 679 152980885 - mma_2866 - sodium:solute symporter family protein 2867 56.50 0 3218442..3219857 + 471 152980947 - mma_2867 - hypothetical protein 2868 54.65 0 3219859..3220815 + 318 152981053 - mma_2868 - hypothetical protein 2869 58.86 +1 3220816..3221622 + 268 152981805 - mma_2869 - hypothetical protein 2870 52.77 0 3221679..3222563 + 294 152981108 - mma_2870 - proteasome-type protease 2871 55.17 0 3222646..3223689 - 347 152980447 purM mma_2871 - phosphoribosylformylglycinamidine cyclo-ligase 2872 61.46 +1 3224043..3224714 + 223 152981564 - mma_2872 - hypothetical protein 2873 55.85 0 3224734..3225408 + 224 152981659 - mma_2873 - HAD family hydrolase 2874 58.04 0 3225401..3226768 + 455 152981224 pcnB mma_2874 - poly(A) polymerase 2875 58.80 0 3226765..3227247 + 160 152979901 folK mma_2875 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 2876 51.44 0 3227310..3227657 + 115 152981647 - mma_2876 - hypothetical protein 2877 52.80 0 3227713..3228354 + 213 152980754 dgk mma_2877 - deoxyguanosine kinase 2878 54.33 0 3228357..3229175 + 272 152980156 panB mma_2878 - 3-methyl-2-oxobutanoate hydroxymethyltransferase 2879 56.94 0 3229233..3230096 - 287 152981174 - mma_2879 - hypothetical protein 2880 52.47 0 3230153..3230821 - 222 152980223 cynT2 mma_2880 - carbonic anhydrase 2881 54.72 0 3230950..3231627 - 225 152982330 - mma_2881 - hypothetical protein 2882 56.44 0 3231648..3232772 - 374 152980481 dnaJ mma_2882 - molecular chaperone DnaJ (heat shock protein) 2883 52.12 0 3232945..3234897 - 650 152980512 dnaK mma_2883 - molecular chaperone DnaK (Hsp70) 2884 52.96 0 3234987..3235526 - 179 152979806 grpE mma_2884 - molecular chaperone GrpE (heat shock protein) 2885 57.18 0 3235989..3237095 - 368 152980316 hemH mma_2885 - ferrochelatase 2886 57.44 0 3237159..3238805 - 548 152980340 recN mma_2886 - RecN DNA repair protein 2887 54.68 0 3238936..3239853 - 305 152980985 ppnK mma_2887 - inorganic polyphosphate / NAD+ kinase 2888 56.49 0 3239931..3240647 + 238 152980913 - mma_2888 - hydrolase 2889 55.88 0 3240730..3241758 + 342 152980076 hrcA mma_2889 - heat-inducible transcription repressor 2890 50.46 -1 3241832..3242269 - 145 152979816 fur mma_2891 - Fur family transcriptional regulator, ferric uptake regulator 2891 55.38 0 3242256..3243017 + 253 152982000 - mma_2890 - hypothetical protein 2892 58.24 0 3243036..3243842 + 268 152979802 dapB mma_2892 - dihydrodipicolinate reductase 2893 58.87 +1 3243883..3244575 + 230 152981657 exbB5 mma_2893 - MotA/TolQ/ExbB proton channel family protein 2894 56.88 0 3244593..3245021 + 142 152981671 exbD6 mma_2894 - biopolymer transport protein ExbD 2895 51.68 0 3245026..3245352 + 108 152982131 - mma_2895 - hypothetical protein 2896 56.27 0 3245444..3248089 + 881 152980718 leuS mma_2896 - leucyl-tRNA synthetase 2897 54.67 0 3248142..3248666 + 174 152980524 rlpB mma_2897 - rare lipoprotein B 2898 57.82 0 3248650..3249666 + 338 152980551 holA mma_2898 - DNA polymerase III subunit delta 2899 58.81 0 3249781..3251028 + 415 152980424 proA mma_2899 - glutamate-5-semialdehyde dehydrogenase 2900 56.19 0 3251082..3251501 + 139 152981640 - mma_2900 - hypothetical protein 2901 56.55 0 3251520..3252122 + 200 152980925 nahD mma_2901 - 2-hydroxychromene-2-carboxylate isomerase 2902 56.84 0 3252230..3253450 + 406 152981177 - mma_2902 - N6-adenine-specific DNA methylase 2903 49.87 -1 3253536..3253910 + 124 152981911 - mma_2903 - glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein 2904 59.71 +1 3254051..3254740 + 229 152981365 - mma_2904 - transcriptional regulator 2905 55.74 0 3254852..3256324 + 490 152979948 gabD mma_2905 - succinate-semialdehyde dehydrogenase (NADP+) 2906 57.53 0 3256389..3257657 + 422 152982580 bcr mma_2906 - major facilitator superfamily drug (bicyclomycin) resistance translocase 2907 57.64 0 3257674..3259833 - 719 152982088 - mma_2907 - hypothetical protein 2908 57.10 0 3259996..3261762 - 588 152982821 - mma_2909 - sensory box histidine kinase/response regulator 2909 54.48 0 3261751..3262497 + 248 152981499 citB5 mma_2908 - LuxR family DNA-binding response regulator 2910 54.10 0 3262506..3263921 - 471 152982684 - mma_2910 - hypothetical protein 2911 52.38 0 3263893..3265782 - 629 152982141 - mma_2911 - hypothetical protein 2912 55.99 0 3266415..3268109 - 564 152980411 ggt5 mma_2912 - gamma-glutamyltranspeptidase 2913 54.17 0 3268311..3268862 - 183 152982672 - mma_2913 - hypothetical protein 2914 53.76 0 3268894..3270210 - 438 152981517 codA mma_2914 - cytosine deaminase 2915 58.13 0 3270235..3271827 - 530 152980349 ggt6 mma_2915 - gamma-glutamyltranspeptidase 2916 52.40 0 3271947..3272591 - 214 152981412 - mma_2916 - LuxR family DNA-binding response regulator 2917 53.52 0 3272588..3273652 - 354 152981531 - mma_2917 - Signal transduction histidine kinase 2918 52.88 0 3273695..3275101 - 468 152982250 - mma_2918 - hypothetical protein 2919 50.58 -1 3275346..3275774 - 142 152982391 usp2 mma_2919 - universal stress protein (Usp) 2920 54.98 0 3275803..3276495 - 230 152981754 - mma_2920 - TerC family integral membrane protein 2921 57.25 0 3276621..3278033 - 470 152982775 - mma_2921 - two-components system response regulator 2922 56.52 0 3278008..3278697 - 229 152981323 ompR6 mma_2922 - two components system response regulator 2923 59.19 +1 3278910..3280247 + 445 152981688 - mma_2923 - 6-aminohexanoate-dimer hydrolase 2924 54.73 0 3280388..3281443 + 351 152982125 - mma_2924 - hypothetical protein 2925 53.25 0 3281534..3282025 - 163 152981507 ohr1 mma_2925 - organic hydroperoxide resistance protein 2926 51.02 0 3282143..3282634 - 163 152982016 - mma_2927 - MarR family transcriptional regulator 2927 48.10 -1 3282618..3282827 + 69 152982992 - mma_2926 - hypothetical protein 2928 55.79 0 3282837..3283553 + 238 152981154 trmB mma_2928 - tRNA (guanine-N7-)-methyltransferase 2929 55.32 0 3283567..3285390 - 607 152980056 recQ mma_2929 - ATP-dependent DNA helicase 2930 54.20 0 3285400..3286233 - 277 152979814 bacA mma_2930 - undecaprenol kinase 2931 58.33 0 3286471..3286998 - 175 152982993 - mma_2931 - hypothetical protein 2932 54.22 0 3287116..3287766 + 216 152981335 pcm2 mma_2932 - protein-L-isoaspartate(D-aspartate) O-methyltransferase 2933 59.57 +1 3287776..3288099 + 107 152981948 - mma_2933 - hypothetical protein 2934 56.63 0 3288152..3289456 + 434 152981557 tolC6 mma_2934 - outer membrane protein, tolC-like 2935 54.36 0 3289501..3290142 - 213 152982014 acrR mma_2935 - TetR/AcrR family transcriptional regulator 2936 59.50 +1 3290388..3291656 + 422 152981741 acrA5 mma_2936 - acriflavin resistance lipoprotein A precursor 2937 55.33 0 3291669..3294818 + 1049 152980474 acrB3 mma_2937 - acriflavin resistance transmembrane protein 2938 57.54 0 3294818..3296263 + 481 152981001 - mma_2938 - drug efflux lipoprotein 2939 49.83 -1 3296361..3296657 - 98 152982723 - mma_2939 - hypothetical protein 2940 53.11 0 3296853..3297383 + 176 152982205 - mma_2940 - hypothetical protein 2941 54.85 0 3297482..3297811 + 109 152982994 - mma_2941 - virulence protein 2942 57.92 0 3297836..3299104 - 422 152980275 kdta mma_2942 - 3-deoxy-D-manno-octulosonic-acid transferase 2943 55.92 0 3299284..3300660 - 458 152981058 algC mma_2943 - phosphomannomutase 2944 56.61 0 3300962..3301786 + 274 152982132 apaH mma_2944 - diadenosine tetraphosphatase 2945 55.02 0 3301783..3302529 - 248 152980297 plsC2 mma_2945 - 1-acyl-sn-glycerol-3-phosphate acyltransferase 2946 59.11 +1 3302604..3303887 - 427 152981059 pyrC2 mma_2946 - dihydroorotase, multifunctional complex type 2947 54.90 0 3303892..3304851 - 319 152980634 pyrB mma_2947 - aspartate carbamoyltransferase catalytic chain 2948 54.96 0 3304844..3305407 - 187 152981536 pyrR1 mma_2948 - pyrimidine regulatory protein PyrR 2949 53.03 0 3305343..3305738 - 131 152981739 ruvX mma_2949 - Hollyday junction resolvase 2950 57.66 0 3305754..3306419 - 221 152981307 - mma_2950 - transcriptional regulator 2951 58.27 0 3306533..3308020 + 495 152981216 phrB mma_2951 - deoxyribodipyrimidine photo-lyase 2952 55.98 0 3308067..3313772 - 1901 152980997 - mma_2952 - two-component hybrid sensor and regulator 2953 55.37 0 3313994..3316276 - 760 152981516 pilJ mma_2953 - PilJ twitching motility protein 2954 57.12 0 3316329..3316904 - 191 152981964 pilI mma_2954 - PilI twitching motility protein 2955 51.37 0 3316915..3317280 - 121 152982489 pilH mma_2955 - twitching motility two-component response regulator transcription regulator protein 2956 51.99 0 3317301..3317702 - 133 152982173 pilG mma_2956 - PilG twitching motility two-component system response regulator 2957 55.38 0 3317854..3318048 - 64 152983300 rubA mma_2957 - rubredoxin 2958 57.83 0 3318103..3318951 + 282 152981526 thiD2 mma_2958 - phosphomethylpyrimidine kinase 2959 59.89 +1 3318985..3320283 + 432 152979840 hemL mma_2959 - glutamate-1-semialdehyde 2,1-aminomutase 2960 53.62 0 3320326..3321291 - 321 152980712 corA2 mma_2960 - Mg2+/Co2+ transporter 2961 53.88 0 3321713..3322408 - 231 152982155 mtgA mma_2961 - monofunctional biosynthetic peptidoglycan transglycosylase 54.72 MEAN 4.12 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0