version 1.0
Janthinobacterium sp. Marseille, complete genome - 1..4110251 3697 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2503 56.71 0 2834031..2834864 - 277 152980934 - mma_2503 - hypothetical protein 2504 54.74 0 2834867..2835931 - 354 152981997 - mma_2504 - hypothetical protein 2505 54.08 0 2835945..2836691 - 248 152981525 - mma_2505 - dehydrogenase/reductase family protein 2506 55.18 0 2836733..2837716 - 327 152981490 - mma_2506 - vanB family oxidoreductase/oxygenase, 2507 53.41 0 2837995..2838975 - 326 152981716 - mma_2507 - porin 2508 53.86 0 2839004..2840533 - 509 152980793 pbuX6 mma_2508 - xanthine permease 2509 52.61 0 2840952..2841869 + 305 152980792 lysR3 mma_2509 - LysR family transcriptional regulator 2510 53.03 0 2841944..2843146 - 400 152980791 amtB3 mma_2510 - ammonium transporter 2511 56.46 0 2843327..2844061 + 244 152980526 aat mma_2511 - leucyl/phenylalanyl-tRNA--protein transferase 2512 55.33 0 2844144..2844893 + 249 152980790 ate1 mma_2512 - arginyl-tRNA-protein transferase 2513 58.67 0 2844968..2846005 + 345 152980020 pyrD mma_2513 - dihydroorotate dehydrogenase 2 2514 52.95 0 2846096..2848399 - 767 152980685 clpA mma_2514 - ATP-dependent Clp protease ATP-binding subunit ClpA 2515 47.57 -1 2848396..2848704 - 102 152983115 clpS mma_2515 - ATP-dependent Clp protease adaptor protein ClpS 2516 49.02 -1 2849040..2849243 + 67 152983285 cspD2 mma_2516 - cold-shock DNA-binding domain-containing protein 2517 55.82 0 2849423..2850058 + 211 152980789 - mma_2517 - pseudouridylate synthase family protein 2518 55.48 0 2850168..2850623 + 151 152981698 - mma_2518 - hypothetical protein 2519 51.14 0 2850721..2850984 - 87 152983166 rpsT mma_2519 - small subunit ribosomal protein S20 2520 57.38 0 2851336..2852886 + 516 152979789 mviN mma_2520 - virulence factor MviN 2521 52.86 0 2852956..2853795 + 279 152980788 - mma_2521 - hypothetical protein 2522 55.89 0 2853839..2855749 - 636 152980787 uup mma_2522 - ATP-binding ABC transporter protein 2523 34.07 -2 2856143..2857087 + 314 152983404 - mma_2523 - hypothetical protein 2524 36.78 -2 2857092..2857526 + 144 152983403 - mma_2524 - hypothetical protein 2525 36.73 -2 2857575..2857898 + 107 152983402 - mma_2525 - hypothetical protein 2526 35.44 -2 2857931..2858548 - 205 152983401 - mma_2526 - hypothetical protein 2527 29.85 -2 2858704..2859162 + 152 152983400 - mma_2527 - hypothetical protein 2528 31.46 -2 2859137..2859457 + 106 152983399 - mma_2528 - hypothetical protein 2529 36.94 -2 2859454..2860728 + 424 152983398 - mma_2529 - hypothetical protein 2530 34.04 -2 2860742..2861167 + 141 152983397 - mma_2530 - hypothetical protein 2531 33.58 -2 2861169..2861570 + 133 152983396 - mma_2531 - hypothetical protein 2532 35.09 -2 2862157..2862897 - 246 152983395 - mma_2532 - hypothetical protein 2533 33.83 -2 2862972..2864186 - 404 152983286 - mma_2533 - phage integrase/recombinase 2534 55.08 0 2865233..2865862 - 209 152981763 - mma_2534 - hypothetical protein 2535 56.47 0 2866079..2868040 - 653 152980945 csdB mma_2535 - selenocysteine lyase 2536 55.41 0 2868050..2868982 - 310 152982851 srpI mma_2536 - major membrane protein I 2537 56.36 0 2869082..2869411 - 109 152982646 - mma_2537 - hypothetical protein 2538 54.73 0 2869371..2870057 - 228 152982292 - mma_2538 - hypothetical protein 2539 55.62 0 2870214..2870738 + 174 152980786 - mma_2539 - hypothetical protein 2540 54.65 0 2870993..2871691 + 232 152980785 gntR2 mma_2540 - GntR family transcriptional regulator 2541 57.77 0 2871761..2873356 - 531 152980091 ggt3 mma_2541 - gamma-glutamyltranspeptidase 2542 54.00 0 2873464..2874789 - 441 152980784 oxlT2 mma_2542 - major facilitator superfamily oxalate/formate antiporter 2543 40.54 -2 2874914..2875024 - 36 152982969 - mma_2543 - hypothetical protein 2544 58.44 0 2875235..2875927 - 230 152980783 aqpZ mma_2544 - aquaporin Z 2545 56.06 0 2876154..2876879 - 241 152980365 livF6 mma_2545 - ABC-type branched-chain amino acid transport system ATP-binding protein 2546 55.77 0 2876879..2877649 - 256 152980136 livG6 mma_2546 - ABC-type branched-chain amino acid transport system ATP-binding protein 2547 53.91 0 2877659..2878873 - 404 152980782 livM6 mma_2547 - ABC-type branched-chain amino acid transport system, permease component 2548 57.31 0 2878883..2879812 - 309 152980329 livH6 mma_2548 - branched chain amino acid ABC transporter permease 2549 56.67 0 2880169..2881098 - 309 152980257 ispH mma_2549 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2550 54.82 0 2881186..2881641 - 151 152980781 fkpB mma_2550 - peptidyl-prolyl cis-trans isomerase 2551 56.59 0 2881758..2882432 + 224 152979886 radC2 mma_2551 - DNA repair protein 2552 45.13 -2 2882553..2882891 + 112 152983116 rpmB mma_2552 - 50S ribosomal protein L28 2553 45.24 -2 2882914..2883081 + 55 152983160 rpmG mma_2553 - 50S ribosomal protein L33 2554 58.52 0 2883211..2883873 + 220 152980780 - mma_2554 - nitroreductase 2555 57.92 0 2884328..2885059 + 243 152980779 - mma_2555 - hypothetical protein 2556 58.02 0 2885117..2885833 + 238 152980778 mgtC1 mma_2556 - Mg2+ transport ATPase 2557 58.02 0 2885871..2886818 - 315 152980777 mdcH2 mma_2557 - malonyl CoA-ACP transacylase 2558 56.55 0 2886847..2887755 - 302 152981591 mdcB2 mma_2558 - 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase 2559 55.51 0 2887752..2888423 - 223 152980776 mdcG2 mma_2559 - malonate decarboxylase epsilon subunit 2560 58.30 0 2888407..2889123 - 238 152980775 mdcE2 mma_2560 - malonate decarboxylase gamma subunit 2561 57.78 0 2889120..2890019 - 299 152980774 mdcD2 mma_2561 - malonate decarboxylase beta subunit 2562 55.24 0 2890016..2890330 - 104 152980773 mdcC2 mma_2562 - malonate decarboxylase subunit delta 2563 57.73 0 2890339..2892006 - 555 152980772 mdcA2 mma_2563 - malonate decarboxylase alpha subunit 2564 56.67 0 2892314..2893003 + 229 152980771 gntR3 mma_2564 - GntR family transcriptional regulator 2565 53.95 0 2893105..2893560 + 151 152982678 - mma_2565 - MutT/NUDIX family hydrolase 2566 51.63 0 2893553..2894104 + 183 152982178 - mma_2566 - N-acetyltransferase related protein 2567 53.18 0 2894909..2896102 - 397 152980770 ole1 mma_2567 - stearoyl-CoA desaturase 2568 54.29 0 2896210..2897574 - 454 152980995 - mma_2568 - mechanosensitive ion channel protein 2569 55.53 0 2897575..2898831 - 418 152980769 - mma_2569 - Sun family protein 2570 56.35 0 2898901..2899530 - 209 152980492 purN mma_2570 - phosphoribosylglycinamide formyltransferase 2571 54.39 0 2899710..2900108 - 132 152982697 - mma_2571 - hypothetical protein 2572 49.33 -1 2900155..2900529 - 124 152980768 - mma_2572 - Guanyl-specific ribonuclease Sa 2573 55.94 0 2900666..2901868 - 400 152982192 - mma_2573 - hypothetical protein 2574 56.55 0 2901925..2903703 - 592 152980516 ggt4 mma_2574 - gamma-glutamyltranspeptidase 2575 58.89 +1 2903890..2906037 - 715 152980767 rrpP mma_2575 - membrane-bound proton-translocating pyrophosphatase 2576 54.79 0 2906313..2906969 - 218 152980698 adk mma_2576 - adenylate kinase 2577 56.44 0 2907136..2907888 - 250 152980338 kdsB mma_2577 - 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) 2578 51.91 0 2907935..2908117 - 60 152983287 - mma_2578 - hypothetical protein 2579 59.29 +1 2908098..2909141 - 347 152980255 lpxK mma_2579 - tetraacyldisaccharide 4'-kinase 2580 54.71 0 2909202..2909636 - 144 152981897 exbD5 mma_2580 - biopolymer transport protein ExbD 2581 55.39 0 2909658..2910269 - 203 152981742 exbB4 mma_2581 - biopolymer transport protein ExbB 2582 53.69 0 2910677..2912302 - 541 152982685 - mma_2582 - ATPases of the AAA+ class 2583 56.76 0 2912782..2913669 + 295 152981429 rarD1 mma_2583 - transporter of the DMT superfamily chloramphenicol-sensitivity protein (rarD family) 2584 57.12 0 2913704..2915410 - 568 152981384 tar11 mma_2584 - methyl-accepting chemotaxis protein 2585 59.47 +1 2915596..2916957 + 453 152980028 xseA mma_2585 - exodeoxyribonuclease VII large subunit 2586 54.30 0 2917008..2919482 - 824 152981071 fhuE3 mma_2586 - outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid 2587 57.41 0 2919601..2920626 - 341 152981212 fecR13 mma_2587 - Fe2+-dicitrate sensor, membrane component 2588 54.58 0 2920602..2921147 - 181 152981879 fecI13 mma_2588 - ECF subfamily RNA polymerase sigma factor 2589 51.64 0 2921394..2921972 + 192 152981017 sodB mma_2589 - superoxide dismutase 2590 52.32 0 2922412..2923422 + 336 152981230 cysP mma_2590 - thiosulfate binding periplasmic protein of sulfate/thiosulfate ABC transporter 2591 55.04 0 2923646..2924428 + 260 152980225 cysU2 mma_2591 - sulfate transport system permease protein 2592 54.34 0 2924439..2925290 + 283 152981039 cysW2 mma_2592 - sulfate transport system permease protein 2593 57.74 0 2926160..2927425 + 421 152981465 - mma_2593 - hypothetical protein 2594 56.22 0 2927422..2928321 - 299 152982244 - mma_2594 - LysR family transcriptional regulator 2595 52.34 0 2928378..2928740 + 120 152981951 - mma_2595 - hypothetical protein 2596 58.18 0 2929051..2929686 + 211 152980256 cynT1 mma_2596 - carbonic anhydrase 2597 52.99 0 2929746..2930849 - 367 152981759 - mma_2597 - hypothetical protein 2598 56.33 0 2931079..2931813 + 244 152982069 - mma_2598 - hypothetical protein 2599 55.22 0 2931823..2932416 - 197 152982465 - mma_2599 - hypothetical protein 2600 56.49 0 2932420..2932812 - 130 152981885 - mma_2600 - hypothetical protein 2601 57.60 0 2932824..2933639 + 271 152982448 - mma_2601 - cytochrome c family protein 2602 50.77 0 2933645..2934487 - 280 152982260 - mma_2602 - hypothetical protein 54.72 MEAN 4.12 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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