version 1.0
Janthinobacterium sp. Marseille, complete genome - 1..4110251 3697 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2473 54.21 0 2793373..2795451 + 692 152981977 - mma_2473 - autotransporter 2474 54.85 0 2795682..2797814 + 710 152981775 - mma_2474 - autotransporter 2475 57.34 0 2798268..2800379 + 703 152981932 - mma_2475 - autotransporter 2476 54.16 0 2800465..2803038 + 857 152982347 - mma_2476 - hemagglutinin-related protein 2477 56.37 0 2803107..2803883 - 258 152982667 - mma_2477 - glucose-1-dehydrogenase, (3-oxoacyl-(acyl carrier protein) reductase) 2478 56.73 0 2804023..2804958 + 311 152980802 gcvA mma_2478 - LysR family transcriptional regulator 2479 55.56 0 2805006..2805626 - 206 152980801 - mma_2479 - hypothetical protein 2480 55.42 0 2805626..2806576 - 316 152979847 - mma_2480 - nitrilase 2481 55.54 0 2806593..2808227 - 544 152980800 - mma_2481 - major facilitator superfamily sugar transporter 2482 55.71 0 2808294..2809352 + 352 152980799 iclR1 mma_2482 - IclR family transcriptional regulator 2483 55.14 0 2809398..2810282 - 294 152980798 tauC mma_2483 - ABC-type sulfonate/nitrate transport system permease protein 2484 56.27 0 2810279..2811163 - 294 152980243 tauB mma_2484 - sulfonate/nitrate transport system ATP-binding protein 2485 53.64 0 2811222..2812265 - 347 152980797 tauA mma_2485 - ABC-type sulfonate/nitrate transport system substrate-binding protein 2486 54.81 0 2812312..2813205 - 297 152980139 tauD mma_2486 - taurine dioxygenase 2487 55.18 0 2813377..2814342 - 321 152980310 cysE3 mma_2487 - serine O-acetyltransferase 2488 43.70 -2 2814992..2815126 + 44 152983284 ecnB mma_2488 - entericidin B precursor 2489 55.56 0 2815243..2815701 - 152 152982011 - mma_2489 - hypothetical protein 2490 55.27 0 2816007..2817041 - 344 152980796 dusA mma_2490 - tRNA-dihydrouridine synthase A 2491 58.86 +1 2817193..2818512 + 439 152979966 - mma_2491 - beta alanine--pyruvate transaminase 2492 52.69 0 2818624..2820462 - 612 152980795 typA mma_2492 - GTP-binding elongation factor 2493 57.35 0 2820648..2821592 - 314 152980517 truB mma_2493 - tRNA pseudouridine synthase B 2494 56.07 0 2821708..2822094 - 128 152980431 rbfA mma_2494 - ribosome-binding factor A 2495 55.12 0 2822212..2825025 - 937 152980794 infB mma_2495 - translation initiation factor IF-2 2496 53.40 0 2825076..2826635 - 519 152980158 nusA mma_2496 - N utilization substance protein A 2497 50.68 0 2826632..2827144 - 170 152981795 - mma_2497 - hypothetical protein 2498 59.72 +1 2827416..2829056 - 546 152981088 - mma_2498 - ribosomal large subunit pseudouridine synthase B 2499 52.43 0 2829034..2830002 - 322 152981579 scpB mma_2499 - segregation and condensation protein B 2500 51.54 0 2830292..2830972 + 226 152981884 - mma_2500 - NUDIX hydrolase 2501 57.11 0 2831089..2832501 - 470 152981296 - mma_2501 - N-ethylammeline chlorohydrolase 2502 55.41 0 2832525..2833919 - 464 152980057 pbuX5 mma_2502 - xanthine permease 2503 56.71 0 2834031..2834864 - 277 152980934 - mma_2503 - hypothetical protein 2504 54.74 0 2834867..2835931 - 354 152981997 - mma_2504 - hypothetical protein 2505 54.08 0 2835945..2836691 - 248 152981525 - mma_2505 - dehydrogenase/reductase family protein 2506 55.18 0 2836733..2837716 - 327 152981490 - mma_2506 - vanB family oxidoreductase/oxygenase, 2507 53.41 0 2837995..2838975 - 326 152981716 - mma_2507 - porin 2508 53.86 0 2839004..2840533 - 509 152980793 pbuX6 mma_2508 - xanthine permease 2509 52.61 0 2840952..2841869 + 305 152980792 lysR3 mma_2509 - LysR family transcriptional regulator 2510 53.03 0 2841944..2843146 - 400 152980791 amtB3 mma_2510 - ammonium transporter 2511 56.46 0 2843327..2844061 + 244 152980526 aat mma_2511 - leucyl/phenylalanyl-tRNA--protein transferase 2512 55.33 0 2844144..2844893 + 249 152980790 ate1 mma_2512 - arginyl-tRNA-protein transferase 2513 58.67 0 2844968..2846005 + 345 152980020 pyrD mma_2513 - dihydroorotate dehydrogenase 2 2514 52.95 0 2846096..2848399 - 767 152980685 clpA mma_2514 - ATP-dependent Clp protease ATP-binding subunit ClpA 2515 47.57 -1 2848396..2848704 - 102 152983115 clpS mma_2515 - ATP-dependent Clp protease adaptor protein ClpS 2516 49.02 -1 2849040..2849243 + 67 152983285 cspD2 mma_2516 - cold-shock DNA-binding domain-containing protein 2517 55.82 0 2849423..2850058 + 211 152980789 - mma_2517 - pseudouridylate synthase family protein 2518 55.48 0 2850168..2850623 + 151 152981698 - mma_2518 - hypothetical protein 2519 51.14 0 2850721..2850984 - 87 152983166 rpsT mma_2519 - small subunit ribosomal protein S20 2520 57.38 0 2851336..2852886 + 516 152979789 mviN mma_2520 - virulence factor MviN 2521 52.86 0 2852956..2853795 + 279 152980788 - mma_2521 - hypothetical protein 2522 55.89 0 2853839..2855749 - 636 152980787 uup mma_2522 - ATP-binding ABC transporter protein 2523 34.07 -2 2856143..2857087 + 314 152983404 - mma_2523 - hypothetical protein 2524 36.78 -2 2857092..2857526 + 144 152983403 - mma_2524 - hypothetical protein 2525 36.73 -2 2857575..2857898 + 107 152983402 - mma_2525 - hypothetical protein 2526 35.44 -2 2857931..2858548 - 205 152983401 - mma_2526 - hypothetical protein 2527 29.85 -2 2858704..2859162 + 152 152983400 - mma_2527 - hypothetical protein 2528 31.46 -2 2859137..2859457 + 106 152983399 - mma_2528 - hypothetical protein 2529 36.94 -2 2859454..2860728 + 424 152983398 - mma_2529 - hypothetical protein 2530 34.04 -2 2860742..2861167 + 141 152983397 - mma_2530 - hypothetical protein 2531 33.58 -2 2861169..2861570 + 133 152983396 - mma_2531 - hypothetical protein 2532 35.09 -2 2862157..2862897 - 246 152983395 - mma_2532 - hypothetical protein 2533 33.83 -2 2862972..2864186 - 404 152983286 - mma_2533 - phage integrase/recombinase 2534 55.08 0 2865233..2865862 - 209 152981763 - mma_2534 - hypothetical protein 2535 56.47 0 2866079..2868040 - 653 152980945 csdB mma_2535 - selenocysteine lyase 2536 55.41 0 2868050..2868982 - 310 152982851 srpI mma_2536 - major membrane protein I 2537 56.36 0 2869082..2869411 - 109 152982646 - mma_2537 - hypothetical protein 2538 54.73 0 2869371..2870057 - 228 152982292 - mma_2538 - hypothetical protein 2539 55.62 0 2870214..2870738 + 174 152980786 - mma_2539 - hypothetical protein 2540 54.65 0 2870993..2871691 + 232 152980785 gntR2 mma_2540 - GntR family transcriptional regulator 2541 57.77 0 2871761..2873356 - 531 152980091 ggt3 mma_2541 - gamma-glutamyltranspeptidase 2542 54.00 0 2873464..2874789 - 441 152980784 oxlT2 mma_2542 - major facilitator superfamily oxalate/formate antiporter 2543 40.54 -2 2874914..2875024 - 36 152982969 - mma_2543 - hypothetical protein 2544 58.44 0 2875235..2875927 - 230 152980783 aqpZ mma_2544 - aquaporin Z 2545 56.06 0 2876154..2876879 - 241 152980365 livF6 mma_2545 - ABC-type branched-chain amino acid transport system ATP-binding protein 2546 55.77 0 2876879..2877649 - 256 152980136 livG6 mma_2546 - ABC-type branched-chain amino acid transport system ATP-binding protein 2547 53.91 0 2877659..2878873 - 404 152980782 livM6 mma_2547 - ABC-type branched-chain amino acid transport system, permease component 2548 57.31 0 2878883..2879812 - 309 152980329 livH6 mma_2548 - branched chain amino acid ABC transporter permease 2549 56.67 0 2880169..2881098 - 309 152980257 ispH mma_2549 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2550 54.82 0 2881186..2881641 - 151 152980781 fkpB mma_2550 - peptidyl-prolyl cis-trans isomerase 2551 56.59 0 2881758..2882432 + 224 152979886 radC2 mma_2551 - DNA repair protein 2552 45.13 -2 2882553..2882891 + 112 152983116 rpmB mma_2552 - 50S ribosomal protein L28 2553 45.24 -2 2882914..2883081 + 55 152983160 rpmG mma_2553 - 50S ribosomal protein L33 2554 58.52 0 2883211..2883873 + 220 152980780 - mma_2554 - nitroreductase 2555 57.92 0 2884328..2885059 + 243 152980779 - mma_2555 - hypothetical protein 2556 58.02 0 2885117..2885833 + 238 152980778 mgtC1 mma_2556 - Mg2+ transport ATPase 2557 58.02 0 2885871..2886818 - 315 152980777 mdcH2 mma_2557 - malonyl CoA-ACP transacylase 2558 56.55 0 2886847..2887755 - 302 152981591 mdcB2 mma_2558 - 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase 2559 55.51 0 2887752..2888423 - 223 152980776 mdcG2 mma_2559 - malonate decarboxylase epsilon subunit 2560 58.30 0 2888407..2889123 - 238 152980775 mdcE2 mma_2560 - malonate decarboxylase gamma subunit 2561 57.78 0 2889120..2890019 - 299 152980774 mdcD2 mma_2561 - malonate decarboxylase beta subunit 2562 55.24 0 2890016..2890330 - 104 152980773 mdcC2 mma_2562 - malonate decarboxylase subunit delta 2563 57.73 0 2890339..2892006 - 555 152980772 mdcA2 mma_2563 - malonate decarboxylase alpha subunit 2564 56.67 0 2892314..2893003 + 229 152980771 gntR3 mma_2564 - GntR family transcriptional regulator 2565 53.95 0 2893105..2893560 + 151 152982678 - mma_2565 - MutT/NUDIX family hydrolase 2566 51.63 0 2893553..2894104 + 183 152982178 - mma_2566 - N-acetyltransferase related protein 2567 53.18 0 2894909..2896102 - 397 152980770 ole1 mma_2567 - stearoyl-CoA desaturase 2568 54.29 0 2896210..2897574 - 454 152980995 - mma_2568 - mechanosensitive ion channel protein 2569 55.53 0 2897575..2898831 - 418 152980769 - mma_2569 - Sun family protein 2570 56.35 0 2898901..2899530 - 209 152980492 purN mma_2570 - phosphoribosylglycinamide formyltransferase 2571 54.39 0 2899710..2900108 - 132 152982697 - mma_2571 - hypothetical protein 2572 49.33 -1 2900155..2900529 - 124 152980768 - mma_2572 - Guanyl-specific ribonuclease Sa 54.72 MEAN 4.12 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0