version 1.0
Janthinobacterium sp. Marseille, complete genome - 1..4110251 3697 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2053 58.49 0 2318306..2319124 - 272 152980220 cdsA mma_2053 - phosphatidate cytidylyltransferase 2054 56.60 0 2319118..2319882 - 254 152981211 uppS mma_2054 - undecaprenyl pyrophosphate synthetase 2055 50.27 -1 2319932..2320492 - 186 152980540 rrf mma_2055 - ribosome recycling factor 2056 56.07 0 2320558..2321274 - 238 152981052 pyrH mma_2056 - uridylate kinase 2057 52.04 0 2321447..2322328 - 293 152980693 tsf mma_2057 - EF-Ts elongation factor 2058 51.19 0 2322455..2323249 - 264 152980757 rpsB mma_2058 - small subunit ribosomal protein S2 2059 55.32 0 2323473..2324309 + 278 152980655 map2 mma_2059 - methionine aminopeptidase 2060 56.37 0 2324316..2326868 + 850 152981008 glnD mma_2060 - protein-PII uridylyltransferas 2061 58.90 +1 2326933..2327679 + 248 152981336 - mma_2061 - pseudouridylate synthase 2062 54.78 0 2327947..2328930 + 327 152981715 - mma_2062 - porin 2063 56.05 0 2329002..2329538 - 178 152981418 def3 mma_2063 - N-formylmethionyl-tRNA deformylase 2064 54.34 0 2329535..2330410 - 291 152980167 galU mma_2064 - UTP--glucose-1-phosphate uridylyltransferase 2065 57.05 0 2330403..2332481 - 692 152981161 ligA mma_2065 - DNA ligase (polydeoxyribonucleotide synthase) 2066 56.66 0 2332488..2333606 - 372 152982108 zipA mma_2066 - hypothetical protein 2067 56.29 0 2333947..2337474 - 1175 152979902 smc mma_2067 - chromosome segregation protein 2068 57.45 0 2337771..2338931 + 386 152979845 dapC mma_2068 - N-succinyldiaminopimelate aminotransferase 2069 56.00 0 2338985..2339809 + 274 152980070 dapD mma_2069 - 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase 2070 53.96 0 2339858..2340982 + 374 152982669 pilU2 mma_2070 - twitching motility protein PilU 2071 51.98 0 2340985..2341338 + 117 152981728 arsC1 mma_2071 - ArsC family protein 2072 56.29 0 2341342..2342469 + 375 152980053 dapE mma_2072 - succinyl-diaminopimelate desuccinylase 2073 53.54 0 2342556..2343446 + 296 152981411 hemK2 mma_2073 - N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 2074 55.62 0 2343674..2345647 + 657 152981021 - mma_2074 - ABC transporter ATPase 2075 57.07 0 2345667..2346500 + 277 152981809 - mma_2075 - hypothetical protein 2076 54.19 0 2346524..2347180 - 218 152981645 - mma_2076 - hypothetical protein 2077 46.60 -1 2347637..2347960 - 107 152983419 - mma_2077 - hypothetical protein 2078 43.75 -2 2348132..2348467 - 111 152983418 - mma_2078 - hypothetical protein 2079 44.06 -2 2348927..2349448 - 173 152983417 - mma_2079 - hypothetical protein 2080 40.25 -2 2349460..2349777 - 105 152983416 - mma_2080 - hypothetical protein 2081 57.69 0 2350160..2350939 - 259 152980650 motB1 mma_2081 - flagellar motor protein MotD 2082 56.01 0 2350968..2351708 - 246 152980181 motA1 mma_2082 - MotA chemotaxis protein 2083 53.01 0 2351690..2352421 - 243 152980386 fliA mma_2083 - RNA polymerase sigma factor for flagellar operon 2084 59.57 +1 2352429..2353133 - 234 152980387 fleN mma_2084 - FleN flagellar synthesis regulator 2085 56.79 0 2353237..2354502 - 421 152980692 flhF mma_2085 - flagellar biosynthesis regulator FlhF 2086 58.18 0 2354499..2356583 - 694 152979994 flhA mma_2086 - FlhA flagellar biosynthesis protein 2087 57.15 0 2356580..2357788 - 402 152980271 flhB mma_2087 - FlhB flagellar biosynthetic protein 2088 57.07 0 2357906..2359093 - 395 152980233 - mma_2088 - signal transduction protein 2089 57.63 0 2359173..2359880 - 235 152980356 cheZ2 mma_2089 - chemotaxis regulator CheZ 2090 51.63 0 2359831..2360229 - 132 152980357 cheY2 mma_2090 - CheY chemotaxis protein 2091 55.19 0 2360381..2361460 - 359 152980521 cheB2 mma_2091 - chemotaxis-specific methylesterase 2092 53.92 0 2361512..2362123 - 203 152979864 cheD2 mma_2092 - chemoreceptor glutamine deamidase CheD 2093 55.18 0 2362130..2363008 - 292 152979933 cheR1 mma_2093 - CheR chemotaxis protein methyltransferase 2094 51.22 0 2363132..2363623 - 163 152980520 cheW4 mma_2094 - CheW purine-binding chemotaxis protein 2095 53.72 0 2363638..2365776 - 712 152980691 cheA3 mma_2095 - CheA chemotaxis protein 2096 49.45 -1 2365829..2366194 - 121 152982726 cheY3 mma_2096 - chemotaxis protein CheY 2097 54.88 0 2366258..2366800 - 180 152982579 - mma_2097 - hypothetical protein 2098 54.00 0 2366841..2367827 - 328 152980289 motB2 mma_2098 - flagellar motor protein MotB 2099 50.41 -1 2367876..2368736 - 286 152980324 motA2 mma_2099 - flagellar motor protein MotA 2100 58.05 0 2368949..2369749 - 266 152982532 - mma_2100 - hypothetical protein 2101 50.73 0 2369782..2370327 - 181 152982540 flhC mma_2101 - transcriptional activator FlhC 2102 51.89 0 2370379..2370696 - 105 152982836 flhD mma_2102 - transcriptional activator FlhD 2103 50.00 -1 2371742..2372371 - 209 152982755 - mma_2103 - hypothetical protein 2104 53.19 0 2372549..2373802 - 417 152980089 lysC mma_2104 - aspartate kinase 2105 55.51 0 2373938..2375326 - 462 152980618 mesJ1 mma_2105 - MesJ cell cycle protein 2106 53.23 0 2375354..2376328 - 324 152980630 accA mma_2106 - acetyl-CoA carboxylase carboxyltransferase subunit alpha 2107 52.78 0 2376374..2377021 - 215 152980259 alkA mma_2107 - DNA-3-methyladenine glycosylase II 2108 54.77 0 2377026..2378420 - 464 152980026 cysS mma_2108 - cysteinyl-tRNA synthetase 2109 51.64 0 2378875..2379453 + 192 152981407 ppiB1 mma_2109 - peptidyl-prolyl cis-trans isomerase B 2110 53.58 0 2379516..2380004 + 162 152981419 ppiB2 mma_2110 - peptidyl-prolyl cis-trans isomerase B 2111 54.32 0 2380044..2380853 + 269 152979937 lpxH mma_2111 - UDP-2,3-diacylglucosamine hydrolase 2112 56.37 0 2380877..2381575 - 232 152981537 - mma_2112 - hypothetical protein 2113 56.59 0 2381586..2382329 - 247 152980684 cysE2 mma_2113 - serine O-acetyltransferase 2114 59.54 +1 2382441..2383184 - 247 152981297 yjfH mma_2114 - RNA methyltransferase 2115 54.96 0 2383187..2385637 - 816 152981195 rnr mma_2115 - exoribonuclease RNAse R 2116 53.07 0 2386037..2386573 - 178 152981816 - mma_2116 - nucleotide phosphoribosyltransferase 2117 54.79 0 2386601..2387914 - 437 152980326 purA1 mma_2117 - adenylosuccinate synthetase 2118 56.42 0 2387918..2389069 - 383 152980114 hisZ mma_2118 - ATP phosphoribosyltransferase regulatory subunit 2119 49.83 -1 2389289..2390179 - 296 152980523 hflC2 mma_2119 - inner membrane-anchored protein 2120 53.49 0 2390179..2391453 - 424 152981571 hflK mma_2120 - membrane protease subunit HflK 2121 53.53 0 2391536..2392654 - 372 152980964 hflX mma_2121 - HflX GTP-binding protein 2122 45.99 -2 2392690..2392926 - 78 152983171 hfq mma_2122 - Hfq protein 2123 54.39 0 2393034..2394377 - 447 152981185 engA mma_2123 - GTP-binding protein EngA 2124 56.64 0 2394386..2395552 - 388 152981826 - mma_2124 - pyrrolo-quinoline quinone 2125 52.69 0 2395571..2396221 - 216 152980881 - mma_2125 - hypothetical protein 2126 53.63 0 2396234..2397583 - 449 152980083 hisS mma_2126 - histidyl-tRNA synthetase 2127 55.35 0 2397635..2398906 - 423 152980073 ispG mma_2127 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 2128 58.72 0 2398914..2399945 - 343 152980880 - mma_2128 - hypothetical protein 2129 53.81 0 2399938..2400738 - 266 152980597 pilF mma_2129 - PilF type IV pilus assembly protein 2130 54.73 0 2400735..2401898 - 387 152980879 yfgB mma_2130 - hypothetical protein 2131 48.59 -1 2401962..2402387 - 141 152980307 ndk mma_2131 - nucleoside-diphosphate kinase 2132 52.81 0 2402597..2403289 + 230 152980878 yccA mma_2132 - hypothetical protein 2133 54.22 0 2403355..2404728 - 457 152980877 ygcA mma_2133 - 23S rRNA 5-methyluridine methyltransferase 2134 56.07 0 2404859..2405896 - 345 152980760 rpoS mma_2134 - RNA polymerase sigma factor RpoS 2135 57.65 0 2405903..2406856 - 317 152980876 nlpD mma_2135 - lipoprotein nlpD precursor 2136 56.31 0 2406897..2407775 - 292 152980875 pcm1 mma_2136 - protein-L-isoaspartate(D-aspartate) O-methyltransferase 2137 56.78 0 2407772..2408509 - 245 152979990 surE mma_2137 - acid phosphatase, stationary-phase survival protein 2138 57.41 0 2408622..2410631 - 669 152979824 dinG mma_2138 - ATP-dependent DNA helicase 2139 47.55 -1 2410722..2410925 - 67 152983264 - mma_2139 - hypothetical protein 2140 55.51 0 2411182..2411988 + 268 152980874 - mma_2140 - Serine/threonine protein phosphatase 2141 54.90 0 2412203..2415007 + 934 152980873 - mma_2141 - hypothetical protein 2142 48.67 -1 2415099..2415398 - 99 152980872 elaB mma_2142 - hypothetical protein 2143 52.76 0 2415484..2415936 - 150 152980871 - mma_2143 - hypothetical protein 2144 56.53 0 2416537..2418666 + 709 152981462 - mma_2144 - signal transduction protein 2145 54.03 0 2419103..2420653 - 516 152980069 leuA1 mma_2145 - 2-isopropylmalate synthase 2146 56.98 0 2420715..2421602 - 295 152979906 pssA1 mma_2146 - phosphatidylserine synthase 2147 55.47 0 2421833..2422582 - 249 152980870 - mma_2147 - hypothetical protein 2148 50.93 0 2422823..2423839 - 338 152980253 ilvC mma_2148 - ketol-acid reductoisomerase 2149 50.81 0 2423878..2424369 - 163 152979813 ilvH mma_2149 - acetolactate synthase 3 regulatory subunit 2150 52.34 0 2424369..2426120 - 583 152980052 ilvB mma_2150 - acetolactate synthase large subunit 2151 51.58 0 2426637..2427206 + 189 152980869 rpoE5 mma_2151 - ECF subfamily RNA polymerase sigma factor 2152 54.17 0 2427203..2427610 + 135 152980868 - mma_2152 - hypothetical protein 54.72 MEAN 4.12 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0