version 1.0
Janthinobacterium sp. Marseille, complete genome - 1..4110251 3697 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2006 59.90 +1 2265613..2266854 + 413 152981116 benE mma_2006 - benzoate transport protein 2007 59.95 +1 2266854..2267657 + 267 152981077 - mma_2007 - hypothetical protein 2008 59.17 +1 2267635..2268114 - 159 152981408 cumB2 mma_2008 - hypothetical protein 2009 54.22 0 2268124..2268573 - 149 152980906 ptpS mma_2009 - 6-pyruvoyl tetrahydrobiopterin synthase 2010 53.77 0 2268580..2269215 - 211 152981565 nrdG mma_2010 - organic radical activating enzyme 2011 59.68 +1 2269425..2271056 - 543 152979942 yjcE mma_2011 - antiporter CPA1 family monovalent cation/proton antiporter 2012 50.00 -1 2271226..2271351 - 41 152983263 - mma_2012 - cyd operon protein YbgT 2013 54.81 0 2271424..2272578 - 384 152980954 cydB mma_2013 - cytochrome bd-I oxidase subunit II 2014 54.60 0 2272575..2274182 - 535 152979960 cydA mma_2014 - cytochrome bd-I oxidase subunit I 2015 61.20 +1 2274238..2275938 - 566 152980895 cydC mma_2015 - ATP-binding component of cytochrome-related transport system 2016 59.40 +1 2275935..2277626 - 563 152981204 cydD mma_2016 - ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components 2017 51.11 0 2277946..2278260 + 104 152982222 - mma_2017 - hypothetical protein 2018 53.98 0 2278355..2279095 - 246 152981493 - mma_2018 - short-chain dehydrogenase 2019 59.20 +1 2279210..2280106 + 298 152981603 - mma_2019 - LysR family transcriptional regulator 2020 55.06 0 2280271..2280675 + 134 152981920 - mma_2020 - hypothetical protein 2021 50.95 0 2280752..2281489 - 245 152982942 azu mma_2021 - azurin 2022 56.98 0 2281516..2282052 + 178 152981906 fecI6 mma_2022 - ECF subfamily RNA polymerase sigma factor 2023 58.67 0 2282136..2283035 + 299 152981338 fecR6 mma_2023 - Fe2+-dicitrate sensor, membrane component 2024 54.85 0 2283126..2285597 + 823 152982445 - mma_2024 - ferric siderophore receptor outer membrane signal peptide protein 2025 51.85 0 2285688..2288096 - 802 152982236 bfrC mma_2025 - ferric siderophore receptor 2026 57.67 0 2288176..2289198 - 340 152981041 fecR7 mma_2026 - Fe2+-dicitrate sensor, membrane component 2027 55.61 0 2289195..2289755 - 186 152981823 fecI7 mma_2027 - ECF subfamily RNA polymerase sigma factor 2028 61.55 +1 2289930..2292332 - 800 152982232 bfrF2 mma_2028 - ferric siderophore receptor 2029 57.88 0 2292461..2293450 - 329 152981320 fecR8 mma_2029 - Fe2+-dicitrate sensor, membrane component 2030 58.62 0 2293447..2293968 - 173 152981850 fecI8 mma_2030 - ECF subfamily RNA polymerase sigma factor 2031 48.15 -1 2294121..2296604 - 827 152982943 - mma_2031 - hypothetical protein 2032 54.75 0 2297102..2298721 - 539 152980120 guaA mma_2032 - bifunctional GMP synthase/glutamine amidotransferase protein 2033 58.33 0 2298783..2299250 - 155 152982512 - mma_2033 - hypothetical protein 2034 56.13 0 2299262..2300722 - 486 152981616 guaB mma_2034 - inosine-5'-monophosphate dehydrogenase oxidoreductase protein 2035 54.76 0 2300885..2301388 + 167 152982430 - mma_2035 - hypothetical protein 2036 54.09 0 2301428..2301745 - 105 152981834 rnfH mma_2036 - hypothetical protein 2037 52.31 0 2301729..2302160 - 143 152981496 - mma_2037 - oligoketide cyclase/lipid transport protein 2038 52.44 0 2302224..2302673 + 149 152980762 smpB2 mma_2038 - SsrA-binding protein 2039 52.63 0 2302722..2303654 - 310 152981486 hflC1 mma_2039 - membrane protease subunit 2040 53.29 0 2303668..2304123 - 151 152982309 - mma_2040 - hypothetical protein 2041 53.83 0 2304285..2306723 - 812 152980641 ppsA mma_2041 - phosphoenolpyruvate synthase 2042 52.06 0 2306916..2307764 + 282 152980961 - mma_2042 - hypothetical protein 2043 56.98 0 2307761..2308555 - 264 152981475 spoU mma_2043 - RNA methyltransferase 2044 54.82 0 2308573..2309205 - 210 152980735 rnhB mma_2044 - ribonuclease HII 2045 57.81 0 2309226..2310410 - 394 152980653 lpxB mma_2045 - lipid-A-disaccharide synthase 2046 56.02 0 2310394..2311182 - 262 152980337 lpxA mma_2046 - UDP-N-acetylglucosamine acyltransferase 2047 52.88 0 2311182..2311667 - 161 152980532 fabZ mma_2047 - 3R-hydroxymyristoyl ACP dehydrase 2048 56.79 0 2311664..2312716 - 350 152980152 lpxD mma_2048 - UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 2049 50.87 0 2312732..2313250 - 172 152981878 - mma_2049 - outer membrane chaperone Skp 2050 49.54 -1 2313306..2315705 - 799 152981040 ecfK mma_2050 - outer membrane protein 2051 55.63 0 2315762..2317129 - 455 152981722 ecfE mma_2051 - membrane-associated Zn-dependent protease 2052 57.46 0 2317126..2318298 - 390 152980021 dxr mma_2052 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase 2053 58.49 0 2318306..2319124 - 272 152980220 cdsA mma_2053 - phosphatidate cytidylyltransferase 2054 56.60 0 2319118..2319882 - 254 152981211 uppS mma_2054 - undecaprenyl pyrophosphate synthetase 2055 50.27 -1 2319932..2320492 - 186 152980540 rrf mma_2055 - ribosome recycling factor 2056 56.07 0 2320558..2321274 - 238 152981052 pyrH mma_2056 - uridylate kinase 2057 52.04 0 2321447..2322328 - 293 152980693 tsf mma_2057 - EF-Ts elongation factor 2058 51.19 0 2322455..2323249 - 264 152980757 rpsB mma_2058 - small subunit ribosomal protein S2 2059 55.32 0 2323473..2324309 + 278 152980655 map2 mma_2059 - methionine aminopeptidase 2060 56.37 0 2324316..2326868 + 850 152981008 glnD mma_2060 - protein-PII uridylyltransferas 2061 58.90 +1 2326933..2327679 + 248 152981336 - mma_2061 - pseudouridylate synthase 2062 54.78 0 2327947..2328930 + 327 152981715 - mma_2062 - porin 2063 56.05 0 2329002..2329538 - 178 152981418 def3 mma_2063 - N-formylmethionyl-tRNA deformylase 2064 54.34 0 2329535..2330410 - 291 152980167 galU mma_2064 - UTP--glucose-1-phosphate uridylyltransferase 2065 57.05 0 2330403..2332481 - 692 152981161 ligA mma_2065 - DNA ligase (polydeoxyribonucleotide synthase) 2066 56.66 0 2332488..2333606 - 372 152982108 zipA mma_2066 - hypothetical protein 2067 56.29 0 2333947..2337474 - 1175 152979902 smc mma_2067 - chromosome segregation protein 2068 57.45 0 2337771..2338931 + 386 152979845 dapC mma_2068 - N-succinyldiaminopimelate aminotransferase 2069 56.00 0 2338985..2339809 + 274 152980070 dapD mma_2069 - 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase 2070 53.96 0 2339858..2340982 + 374 152982669 pilU2 mma_2070 - twitching motility protein PilU 2071 51.98 0 2340985..2341338 + 117 152981728 arsC1 mma_2071 - ArsC family protein 2072 56.29 0 2341342..2342469 + 375 152980053 dapE mma_2072 - succinyl-diaminopimelate desuccinylase 2073 53.54 0 2342556..2343446 + 296 152981411 hemK2 mma_2073 - N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 2074 55.62 0 2343674..2345647 + 657 152981021 - mma_2074 - ABC transporter ATPase 2075 57.07 0 2345667..2346500 + 277 152981809 - mma_2075 - hypothetical protein 2076 54.19 0 2346524..2347180 - 218 152981645 - mma_2076 - hypothetical protein 2077 46.60 -1 2347637..2347960 - 107 152983419 - mma_2077 - hypothetical protein 2078 43.75 -2 2348132..2348467 - 111 152983418 - mma_2078 - hypothetical protein 2079 44.06 -2 2348927..2349448 - 173 152983417 - mma_2079 - hypothetical protein 2080 40.25 -2 2349460..2349777 - 105 152983416 - mma_2080 - hypothetical protein 2081 57.69 0 2350160..2350939 - 259 152980650 motB1 mma_2081 - flagellar motor protein MotD 2082 56.01 0 2350968..2351708 - 246 152980181 motA1 mma_2082 - MotA chemotaxis protein 2083 53.01 0 2351690..2352421 - 243 152980386 fliA mma_2083 - RNA polymerase sigma factor for flagellar operon 2084 59.57 +1 2352429..2353133 - 234 152980387 fleN mma_2084 - FleN flagellar synthesis regulator 2085 56.79 0 2353237..2354502 - 421 152980692 flhF mma_2085 - flagellar biosynthesis regulator FlhF 2086 58.18 0 2354499..2356583 - 694 152979994 flhA mma_2086 - FlhA flagellar biosynthesis protein 2087 57.15 0 2356580..2357788 - 402 152980271 flhB mma_2087 - FlhB flagellar biosynthetic protein 2088 57.07 0 2357906..2359093 - 395 152980233 - mma_2088 - signal transduction protein 2089 57.63 0 2359173..2359880 - 235 152980356 cheZ2 mma_2089 - chemotaxis regulator CheZ 2090 51.63 0 2359831..2360229 - 132 152980357 cheY2 mma_2090 - CheY chemotaxis protein 2091 55.19 0 2360381..2361460 - 359 152980521 cheB2 mma_2091 - chemotaxis-specific methylesterase 2092 53.92 0 2361512..2362123 - 203 152979864 cheD2 mma_2092 - chemoreceptor glutamine deamidase CheD 2093 55.18 0 2362130..2363008 - 292 152979933 cheR1 mma_2093 - CheR chemotaxis protein methyltransferase 2094 51.22 0 2363132..2363623 - 163 152980520 cheW4 mma_2094 - CheW purine-binding chemotaxis protein 2095 53.72 0 2363638..2365776 - 712 152980691 cheA3 mma_2095 - CheA chemotaxis protein 2096 49.45 -1 2365829..2366194 - 121 152982726 cheY3 mma_2096 - chemotaxis protein CheY 2097 54.88 0 2366258..2366800 - 180 152982579 - mma_2097 - hypothetical protein 2098 54.00 0 2366841..2367827 - 328 152980289 motB2 mma_2098 - flagellar motor protein MotB 2099 50.41 -1 2367876..2368736 - 286 152980324 motA2 mma_2099 - flagellar motor protein MotA 2100 58.05 0 2368949..2369749 - 266 152982532 - mma_2100 - hypothetical protein 2101 50.73 0 2369782..2370327 - 181 152982540 flhC mma_2101 - transcriptional activator FlhC 2102 51.89 0 2370379..2370696 - 105 152982836 flhD mma_2102 - transcriptional activator FlhD 2103 50.00 -1 2371742..2372371 - 209 152982755 - mma_2103 - hypothetical protein 2104 53.19 0 2372549..2373802 - 417 152980089 lysC mma_2104 - aspartate kinase 2105 55.51 0 2373938..2375326 - 462 152980618 mesJ1 mma_2105 - MesJ cell cycle protein 54.72 MEAN 4.12 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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