version 1.0
Janthinobacterium sp. Marseille, complete genome - 1..4110251 3697 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1241 55.81 0 1409649..1410983 + 444 152981187 pbuX4 mma_1241 - xanthine permease 1242 57.25 0 1411041..1411550 + 169 152981769 cumB1 mma_1242 - cytosine/adenosine deaminase 1243 52.53 0 1411616..1412110 - 164 152982922 - mma_1243 - hypothetical protein 1244 54.23 0 1412235..1412813 - 192 152982081 - mma_1244 - TetR family transcriptional regulator 1245 54.43 0 1412935..1413882 - 315 152982246 - mma_1245 - AraC family transcriptional regulator 1246 54.30 0 1414073..1414921 + 282 152982805 - mma_1246 - short chain dehydrogenase 1247 54.90 0 1415609..1416823 - 404 152980406 tyrB mma_1247 - aromatic amino acid aminotransferase 1248 56.00 0 1416941..1419031 + 696 152979775 uvrB mma_1248 - excinuclease ABC subunit B 1249 56.74 0 1419112..1419897 + 261 152982066 ung mma_1249 - uracil DNA glycosylase 1250 57.41 0 1419914..1420648 - 244 152982098 - mma_1250 - TetR family transcriptional regulator 1251 52.74 0 1421173..1421646 + 157 152981590 iscR mma_1251 - iron-sulfur cluster assembly transcription factor 1252 53.11 0 1421664..1422917 + 417 152980888 iscS mma_1252 - cysteine desulfurase 1253 54.07 0 1422973..1423377 + 134 152981627 nifU mma_1253 - nitrogen fixation protein NifU 1254 50.62 0 1423453..1423776 + 107 152981602 iscA mma_1254 - [Fe-S] cluster formation/repair protein 1255 55.62 0 1423941..1424456 + 171 152980482 hscB mma_1255 - molecular chaperone HscB (Hsc20) 1256 57.54 0 1424580..1426442 + 620 152981263 hscA mma_1256 - chaperone protein HscA 1257 54.57 0 1426545..1426883 + 112 152982622 fdx mma_1257 - ferredoxin, 2Fe-2S type 1258 48.21 -1 1426895..1427089 + 64 152983235 - mma_1258 - hypothetical protein 1259 56.76 0 1427157..1427822 - 221 152982061 - mma_1259 - hypothetical protein 1260 56.25 0 1428007..1429542 - 511 152980207 lysS mma_1260 - lysyl-tRNA synthetase 1261 55.02 0 1429600..1430704 - 367 152980486 prfB mma_1261 - RF-2 peptide chain release factor 1262 58.13 0 1430845..1431570 + 241 152982621 - mma_1262 - hypothetical protein 1263 60.36 +1 1431572..1433221 - 549 152981063 recJ mma_1263 - single-stranded-DNA-specific exonuclease protein 1264 57.98 0 1433266..1434312 - 348 152981528 - mma_1264 - hypothetical protein 1265 56.32 0 1434507..1435772 + 421 152981241 lolE mma_1265 - ABC-type transport system, involved in lipoprotein release, permease component 1266 56.04 0 1435765..1436451 + 228 152982345 lolD mma_1266 - ABC-type transport system, involved in lipoprotein release, ATPase component 1267 57.20 0 1436498..1437310 + 270 152980751 tatD1 mma_1267 - Mg-dependent DNase 1268 57.43 0 1437319..1439733 + 804 152981628 comEC mma_1268 - DNA internalization-related competence protein ComEC/Rec2 1269 54.93 0 1439950..1441593 + 547 152980311 pyrG mma_1269 - CTP synthetase 1270 53.82 0 1441668..1442951 + 427 152979934 eno mma_1270 - enolase 1271 52.55 0 1443008..1443340 + 110 152981903 ftsB mma_1271 - cell division protein FtsB 1272 57.39 0 1443389..1444315 - 308 152981175 hslo mma_1272 - molecular chaperone Hsp33 1273 55.43 0 1444318..1444842 - 174 152981339 paaY mma_1273 - carbonic anhydrase 1274 60.31 +1 1445039..1445872 + 277 152981254 - mma_1274 - hypothetical protein 1275 52.94 0 1446058..1446363 + 101 152982865 - mma_1275 - hypothetical protein 1276 57.09 0 1446546..1447412 + 288 152982552 - mma_1276 - alpha/beta fold family hydrolase 1277 55.08 0 1447507..1448343 + 278 152981327 - mma_1277 - hypothetical protein 1278 55.56 0 1448446..1449318 + 290 152980711 htpX mma_1278 - heat shock protein HtpX 1279 58.49 0 1449376..1449999 + 207 152981334 sua5 mma_1279 - translation factor (SUA5) 1280 51.90 0 1450140..1450796 + 218 152981966 - mma_1280 - M50 family peptidase 1281 57.56 0 1450803..1451417 + 204 152980905 - mma_1281 - hypothetical protein 1282 54.04 0 1451504..1452382 + 292 152980584 dapA1 mma_1282 - dihydrodipicolinate synthase 1283 55.76 0 1452480..1453634 + 384 152981301 - mma_1283 - hypothetical protein 1284 57.82 0 1453666..1454445 + 259 152981637 - mma_1284 - metallo-beta-lactamase superfamily protein 1285 55.56 0 1454525..1454758 - 77 152983347 - mma_1285 - hypothetical protein 1286 52.85 0 1455041..1456162 - 373 152981030 - mma_1286 - hypothetical protein 1287 52.20 0 1456268..1456813 + 181 152981604 slyD mma_1287 - FKBP-type peptidyl-prolyl cis-trans isomerase SlyD 1288 55.98 0 1456911..1457855 - 314 152982565 - mma_1288 - hypothetical protein 1289 56.96 0 1457864..1460512 - 882 152979852 mutS mma_1289 - DNA mismatch repair protein 1290 52.71 0 1460666..1461403 - 245 152981522 - mma_1290 - GntR family transcriptional regulator 1291 54.85 0 1461726..1462715 + 329 152981270 tctC6 mma_1291 - tricarboxylate binding receptor 1292 53.21 0 1462727..1463209 + 160 152982425 tctB6 mma_1292 - small permease component of tripartite tricarboxylate transporter 1293 56.03 0 1463222..1464763 + 513 152981238 tctA6 mma_1293 - tricarboxylate transport protein TctA 1294 54.62 0 1464896..1465825 + 309 152980883 - mma_1294 - hydrolase 1295 54.19 0 1465963..1467204 + 413 152981865 - mma_1295 - porin 1296 53.71 0 1467319..1468005 - 228 152981074 - mma_1296 - FAA-hydrolase family protein 1297 57.39 0 1468637..1469983 - 448 152981148 rhlE mma_1297 - ATP-dependent RNA helicase 1298 57.48 0 1470229..1471023 - 264 152980664 suhB mma_1298 - myo-inositol-1(or 4)-monophosphatase 1299 57.09 0 1471155..1471916 + 253 152981160 last mma_1299 - tRNA/rRNA methyltransferase 1300 59.24 +1 1471927..1472586 - 219 152981403 lexA mma_1300 - LexA transcription regulation repressor 1301 52.57 0 1472869..1473237 + 122 152981661 rpsF mma_1301 - small subunit ribosomal protein S6 1302 48.64 -1 1473265..1473558 + 97 152981956 priB mma_1302 - primosomal replication protein N 1303 45.96 -2 1473574..1473858 + 94 152983164 rpsR mma_1303 - 30S ribosomal protein S18 1304 49.45 -1 1473885..1474337 + 150 152980064 rplI mma_1304 - large subunit ribosomal protein L9 1305 56.49 0 1474449..1475834 + 461 152979846 dnaB mma_1305 - replicative DNA helicase 1306 51.52 0 1475930..1476556 + 208 152981707 - mma_1306 - phosphate transport regulator 1307 55.46 0 1476679..1477686 + 335 152979894 pitA mma_1307 - inorganic phosphate transporter 1308 57.49 0 1477754..1479421 - 555 152981027 - mma_1308 - ATPase related to phosphate starvation-inducible protein PhoH 1309 49.90 -1 1479636..1480130 - 164 152981397 bcp mma_1309 - bacterioferritin comigratory protein 1310 56.37 0 1480405..1480773 - 122 152981755 - mma_1310 - hypothetical protein 1311 54.33 0 1481052..1482275 + 407 152980088 aspB1 mma_1311 - aminotransferase AlaT 1312 54.92 0 1482356..1483666 + 436 152979984 thrA mma_1312 - homoserine dehydrogenase 1313 54.35 0 1483825..1485342 + 505 152980046 thrC mma_1313 - threonine synthase 1314 56.84 0 1485445..1486686 + 413 152980636 moeA1 mma_1314 - molybdopterin biosynthesis protein 1315 55.81 0 1486694..1486951 + 85 152983236 moaD mma_1315 - molybdopterin converting factor subunit 1 1316 55.06 0 1486970..1487443 + 157 152980396 moaE mma_1316 - molybdenum cofactor biosynthesis protein E 1317 60.27 +1 1487440..1487814 + 124 152981875 crcB mma_1317 - camphor resistance CrcB protein 1318 54.73 0 1487982..1490561 + 859 152979798 clpB mma_1318 - ATP-dependent Clp protease ATP-binding subunit ClpB 1319 56.23 0 1490627..1494355 - 1242 152980627 putA mma_1319 - bifunctional proline dehydrogenase /delta-1-pyrroline-5-carboxylate dehydrogenase 1320 52.93 0 1494535..1496718 - 727 152982353 - mma_1320 - siderophore receptor protein 1321 59.93 +1 1496975..1497895 - 306 152982762 metR mma_1321 - transcriptional activator MetR 1322 57.54 0 1497996..1500284 + 762 152979844 metE2 mma_1322 - 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1323 58.28 0 1500502..1501419 + 305 152981089 - mma_1323 - hypothetical protein 1324 52.74 0 1501798..1503075 + 425 152981229 - mma_1324 - signal transduction protein 1325 55.62 0 1503185..1503736 + 183 152981655 greB2 mma_1325 - transcription elongation factor GreB 1326 57.18 0 1503756..1506032 - 758 152979858 spoT mma_1326 - guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase 1327 50.98 0 1506074..1506277 - 67 152983237 rpoZ mma_1327 - DNA-directed RNA polymerase subunit omega 1328 53.49 0 1506300..1506944 - 214 152979796 gmk mma_1328 - guanylate kinase 1329 58.50 0 1507010..1507927 - 305 152981178 - mma_1329 - hypothetical protein 1330 55.65 0 1508056..1509063 + 335 152981814 - mma_1330 - protein kinase 1331 55.38 0 1509097..1510026 + 309 152981480 - mma_1331 - Serine/threonine protein phosphatase 1332 58.10 0 1510033..1510767 + 244 152979839 rph mma_1332 - ribonuclease PH 1333 54.53 0 1510892..1511476 + 194 152981292 ham1 mma_1333 - xanthosine triphosphate pyrophosphatase 1334 56.39 0 1511473..1512717 + 414 152980187 hemN1 mma_1334 - coproporphyrinogen III oxidase 1335 55.73 0 1513515..1515197 - 560 152982139 cheD1 mma_1335 - methyl-accepting chemotaxis I (serine chemoreceptor protein) transmembrane protein 1336 57.34 0 1515494..1516072 - 192 152982474 - mma_1336 - IclR family transcriptional regulator 1337 52.07 0 1516323..1516781 - 152 152982223 - mma_1337 - hypothetical protein 1338 53.78 0 1516865..1517314 + 149 152982718 - mma_1338 - hypothetical protein 1339 54.88 0 1517314..1518000 + 228 152982252 - mma_1339 - hypothetical protein 1340 55.77 0 1518128..1520788 + 886 152981714 - mma_1340 - autotransporter 54.72 MEAN 4.12 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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