version 1.0
Janthinobacterium sp. Marseille, complete genome - 1..4110251 3697 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1207 57.49 0 1370989..1372590 + 533 152981020 - mma_1207 - ABC-type uncharacterized transport system, duplicated ATPase component 1208 54.57 0 1372606..1374201 - 531 152979878 mltD mma_1208 - membrane-bound lytic murein transglycosylase D precursor 1209 55.73 0 1374435..1375211 - 258 152981854 gloB mma_1210 - hydroxyacylglutathione hydrolase 1210 56.03 0 1375210..1375980 + 256 152982721 - mma_1209 - hypothetical protein 1211 56.32 0 1376007..1376441 + 144 152980654 rnhA mma_1211 - ribonuclease HI 1212 56.50 0 1376496..1377203 + 235 152980051 dnaQ mma_1212 - DNA polymerase III epsilon subunit 1213 55.25 0 1377516..1378058 + 180 152980325 fecI3 mma_1213 - ECF subfamily RNA polymerase sigma factor 1214 57.39 0 1378051..1379052 + 333 152981298 fecR3 mma_1214 - Fe2+-dicitrate sensor, membrane component 1215 53.21 0 1379148..1381562 + 804 152982620 - mma_1215 - TonB-dependent siderophore receptor 1216 58.52 0 1381672..1382493 - 273 152980029 thiD1 mma_1216 - phosphomethylpyrimidine kinase 1217 54.84 0 1382649..1385345 - 898 152981134 - mma_1217 - signal transduction protein 1218 54.43 0 1386100..1386426 + 108 152982419 - mma_1218 - hypothetical protein 1219 52.07 0 1386478..1386840 + 120 152982610 - mma_1219 - hypothetical protein 1220 55.21 0 1387267..1388601 + 444 152981262 cfa2 mma_1220 - cyclopropane fatty-acyl-phospholipid synthase 1221 57.65 0 1388666..1389574 - 302 152982492 - mma_1221 - LysR family transcriptional regulator 1222 56.46 0 1389692..1390681 + 329 152981503 vanB3 mma_1222 - vanillate monooxygenase, beta subunit 1223 55.43 0 1390738..1391814 + 358 152979928 vanA mma_1223 - vanillate monooxygenase, alpha subunit 1224 54.18 0 1391862..1392878 + 338 152982659 - mma_1224 - hypothetical protein 1225 50.72 0 1393022..1393642 + 206 152981449 ompW1 mma_1225 - outer membrane protein W 1226 54.80 0 1393821..1394393 + 190 152982484 - mma_1226 - hypothetical protein 1227 54.96 0 1394478..1395536 - 352 152982733 - mma_1227 - PHP-like metal-dependent phosphoesterase 1228 56.27 0 1395533..1396138 - 201 152981730 acpD3 mma_1228 - acyl carrier protein phosphodiesterase 1229 54.71 0 1396149..1396583 - 144 152982308 - mma_1229 - hypothetical protein 1230 57.67 0 1396598..1397353 - 251 152982385 - mma_1230 - hypothetical protein 1231 55.48 0 1397418..1397855 - 145 152981859 - mma_1231 - hypothetical protein 1232 58.16 0 1397967..1399400 + 477 152981144 - mma_1232 - GntR family transcriptional regulator 1233 55.50 0 1399469..1400041 + 190 152981818 fecI4 mma_1233 - ECF subfamily RNA polymerase sigma factor 1234 60.02 +1 1400044..1401036 + 330 152981158 fecR4 mma_1234 - Fe2+-dicitrate sensor, membrane component 1235 53.44 0 1401143..1403584 + 813 152982820 - mma_1235 - outer membrane ferric siderophore receptor 1236 54.76 0 1403718..1404389 + 223 152981434 rluA mma_1236 - pseudouridylate synthases, 23S RNA-specific 1237 55.80 0 1404405..1405481 - 358 152979772 ttuC mma_1237 - tartrate dehydrogenase 1238 54.54 0 1405577..1406491 - 304 152982201 - mma_1238 - LysR family transcriptional regulator 1239 56.30 0 1406706..1408085 + 459 152981118 pbuX3 mma_1239 - xanthine permease 1240 57.09 0 1408122..1409510 + 462 152980942 ssnA mma_1240 - cytosine deaminase 1241 55.81 0 1409649..1410983 + 444 152981187 pbuX4 mma_1241 - xanthine permease 1242 57.25 0 1411041..1411550 + 169 152981769 cumB1 mma_1242 - cytosine/adenosine deaminase 1243 52.53 0 1411616..1412110 - 164 152982922 - mma_1243 - hypothetical protein 1244 54.23 0 1412235..1412813 - 192 152982081 - mma_1244 - TetR family transcriptional regulator 1245 54.43 0 1412935..1413882 - 315 152982246 - mma_1245 - AraC family transcriptional regulator 1246 54.30 0 1414073..1414921 + 282 152982805 - mma_1246 - short chain dehydrogenase 1247 54.90 0 1415609..1416823 - 404 152980406 tyrB mma_1247 - aromatic amino acid aminotransferase 1248 56.00 0 1416941..1419031 + 696 152979775 uvrB mma_1248 - excinuclease ABC subunit B 1249 56.74 0 1419112..1419897 + 261 152982066 ung mma_1249 - uracil DNA glycosylase 1250 57.41 0 1419914..1420648 - 244 152982098 - mma_1250 - TetR family transcriptional regulator 1251 52.74 0 1421173..1421646 + 157 152981590 iscR mma_1251 - iron-sulfur cluster assembly transcription factor 1252 53.11 0 1421664..1422917 + 417 152980888 iscS mma_1252 - cysteine desulfurase 1253 54.07 0 1422973..1423377 + 134 152981627 nifU mma_1253 - nitrogen fixation protein NifU 1254 50.62 0 1423453..1423776 + 107 152981602 iscA mma_1254 - [Fe-S] cluster formation/repair protein 1255 55.62 0 1423941..1424456 + 171 152980482 hscB mma_1255 - molecular chaperone HscB (Hsc20) 1256 57.54 0 1424580..1426442 + 620 152981263 hscA mma_1256 - chaperone protein HscA 1257 54.57 0 1426545..1426883 + 112 152982622 fdx mma_1257 - ferredoxin, 2Fe-2S type 1258 48.21 -1 1426895..1427089 + 64 152983235 - mma_1258 - hypothetical protein 1259 56.76 0 1427157..1427822 - 221 152982061 - mma_1259 - hypothetical protein 1260 56.25 0 1428007..1429542 - 511 152980207 lysS mma_1260 - lysyl-tRNA synthetase 1261 55.02 0 1429600..1430704 - 367 152980486 prfB mma_1261 - RF-2 peptide chain release factor 1262 58.13 0 1430845..1431570 + 241 152982621 - mma_1262 - hypothetical protein 1263 60.36 +1 1431572..1433221 - 549 152981063 recJ mma_1263 - single-stranded-DNA-specific exonuclease protein 1264 57.98 0 1433266..1434312 - 348 152981528 - mma_1264 - hypothetical protein 1265 56.32 0 1434507..1435772 + 421 152981241 lolE mma_1265 - ABC-type transport system, involved in lipoprotein release, permease component 1266 56.04 0 1435765..1436451 + 228 152982345 lolD mma_1266 - ABC-type transport system, involved in lipoprotein release, ATPase component 1267 57.20 0 1436498..1437310 + 270 152980751 tatD1 mma_1267 - Mg-dependent DNase 1268 57.43 0 1437319..1439733 + 804 152981628 comEC mma_1268 - DNA internalization-related competence protein ComEC/Rec2 1269 54.93 0 1439950..1441593 + 547 152980311 pyrG mma_1269 - CTP synthetase 1270 53.82 0 1441668..1442951 + 427 152979934 eno mma_1270 - enolase 1271 52.55 0 1443008..1443340 + 110 152981903 ftsB mma_1271 - cell division protein FtsB 1272 57.39 0 1443389..1444315 - 308 152981175 hslo mma_1272 - molecular chaperone Hsp33 1273 55.43 0 1444318..1444842 - 174 152981339 paaY mma_1273 - carbonic anhydrase 1274 60.31 +1 1445039..1445872 + 277 152981254 - mma_1274 - hypothetical protein 1275 52.94 0 1446058..1446363 + 101 152982865 - mma_1275 - hypothetical protein 1276 57.09 0 1446546..1447412 + 288 152982552 - mma_1276 - alpha/beta fold family hydrolase 1277 55.08 0 1447507..1448343 + 278 152981327 - mma_1277 - hypothetical protein 1278 55.56 0 1448446..1449318 + 290 152980711 htpX mma_1278 - heat shock protein HtpX 1279 58.49 0 1449376..1449999 + 207 152981334 sua5 mma_1279 - translation factor (SUA5) 1280 51.90 0 1450140..1450796 + 218 152981966 - mma_1280 - M50 family peptidase 1281 57.56 0 1450803..1451417 + 204 152980905 - mma_1281 - hypothetical protein 1282 54.04 0 1451504..1452382 + 292 152980584 dapA1 mma_1282 - dihydrodipicolinate synthase 1283 55.76 0 1452480..1453634 + 384 152981301 - mma_1283 - hypothetical protein 1284 57.82 0 1453666..1454445 + 259 152981637 - mma_1284 - metallo-beta-lactamase superfamily protein 1285 55.56 0 1454525..1454758 - 77 152983347 - mma_1285 - hypothetical protein 1286 52.85 0 1455041..1456162 - 373 152981030 - mma_1286 - hypothetical protein 1287 52.20 0 1456268..1456813 + 181 152981604 slyD mma_1287 - FKBP-type peptidyl-prolyl cis-trans isomerase SlyD 1288 55.98 0 1456911..1457855 - 314 152982565 - mma_1288 - hypothetical protein 1289 56.96 0 1457864..1460512 - 882 152979852 mutS mma_1289 - DNA mismatch repair protein 1290 52.71 0 1460666..1461403 - 245 152981522 - mma_1290 - GntR family transcriptional regulator 1291 54.85 0 1461726..1462715 + 329 152981270 tctC6 mma_1291 - tricarboxylate binding receptor 1292 53.21 0 1462727..1463209 + 160 152982425 tctB6 mma_1292 - small permease component of tripartite tricarboxylate transporter 1293 56.03 0 1463222..1464763 + 513 152981238 tctA6 mma_1293 - tricarboxylate transport protein TctA 1294 54.62 0 1464896..1465825 + 309 152980883 - mma_1294 - hydrolase 1295 54.19 0 1465963..1467204 + 413 152981865 - mma_1295 - porin 1296 53.71 0 1467319..1468005 - 228 152981074 - mma_1296 - FAA-hydrolase family protein 1297 57.39 0 1468637..1469983 - 448 152981148 rhlE mma_1297 - ATP-dependent RNA helicase 1298 57.48 0 1470229..1471023 - 264 152980664 suhB mma_1298 - myo-inositol-1(or 4)-monophosphatase 1299 57.09 0 1471155..1471916 + 253 152981160 last mma_1299 - tRNA/rRNA methyltransferase 1300 59.24 +1 1471927..1472586 - 219 152981403 lexA mma_1300 - LexA transcription regulation repressor 1301 52.57 0 1472869..1473237 + 122 152981661 rpsF mma_1301 - small subunit ribosomal protein S6 1302 48.64 -1 1473265..1473558 + 97 152981956 priB mma_1302 - primosomal replication protein N 1303 45.96 -2 1473574..1473858 + 94 152983164 rpsR mma_1303 - 30S ribosomal protein S18 1304 49.45 -1 1473885..1474337 + 150 152980064 rplI mma_1304 - large subunit ribosomal protein L9 1305 56.49 0 1474449..1475834 + 461 152979846 dnaB mma_1305 - replicative DNA helicase 1306 51.52 0 1475930..1476556 + 208 152981707 - mma_1306 - phosphate transport regulator 54.72 MEAN 4.12 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.